RNA–Protein interactions for RNA: ENST00000395946.2

XCR1-202, Transcript of X-C motif chemokine receptor 1, humanhuman

TSL 1 (best)

Gene XCR1, Length 332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-202ENST00000395946 ADRA2BP18089 450 aa11.62□□□□□ -0.55
XCR1-202ENST00000395946 CDK13Q14004 1512 aaKnown RBP11.6□□□□□ -0.55
XCR1-202ENST00000395946 CLIP1P30622 1438 aa11.6□□□□□ -0.55
XCR1-202ENST00000395946 SCAPERQ9BY12 1400 aa11.6□□□□□ -0.55
XCR1-202ENST00000395946 ZNF518AQ6AHZ1 1483 aa11.59□□□□□ -0.55
XCR1-202ENST00000395946 KIF14Q15058 1648 aa11.59□□□□□ -0.55
XCR1-202ENST00000395946 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
XCR1-202ENST00000395946 RIMS1Q86UR5 1692 aaKnown RBP11.59□□□□□ -0.55
XCR1-202ENST00000395946 EFCAB2Q5VUJ9 269 aa11.58□□□□□ -0.56
XCR1-202ENST00000395946 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
XCR1-202ENST00000395946 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
XCR1-202ENST00000395946 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
XCR1-202ENST00000395946 ATP10AO60312 1499 aa11.57□□□□□ -0.56
XCR1-202ENST00000395946 ARHGAP35Q9NRY4 1499 aa11.57□□□□□ -0.56
XCR1-202ENST00000395946 ARHGEF12Q9NZN5 1544 aa11.56□□□□□ -0.56
XCR1-202ENST00000395946 KDM5CP41229 1560 aa11.56□□□□□ -0.56
XCR1-202ENST00000395946 RANGAP1P46060 587 aaPredicted RBP11.56□□□□□ -0.56
XCR1-202ENST00000395946 REREQ9P2R6 1566 aa11.56□□□□□ -0.56
XCR1-202ENST00000395946 CCDC18Q5T9S5 1454 aa11.55□□□□□ -0.56
XCR1-202ENST00000395946 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
XCR1-202ENST00000395946 FER1L4A9Z1Z3 1794 aa11.53□□□□□ -0.56
XCR1-202ENST00000395946 MLH3Q9UHC1 1453 aa11.52□□□□□ -0.56
XCR1-202ENST00000395946 ARHGAP5Q13017 1502 aa11.52□□□□□ -0.57
XCR1-202ENST00000395946 SIGLEC1Q9BZZ2 1709 aa11.51□□□□□ -0.57
XCR1-202ENST00000395946 CASKIN1Q8WXD9 1431 aa11.51□□□□□ -0.57
XCR1-202ENST00000395946 AGLP35573 1532 aa11.5□□□□□ -0.57
XCR1-202ENST00000395946 PREX1Q8TCU6 1659 aa11.5□□□□□ -0.57
XCR1-202ENST00000395946 ABCC1P33527 1531 aa11.49□□□□□ -0.57
XCR1-202ENST00000395946 PREX2Q70Z35 1606 aa11.49□□□□□ -0.57
XCR1-202ENST00000395946 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
XCR1-202ENST00000395946 DMRT2Q9Y5R5 561 aa11.48□□□□□ -0.57
XCR1-202ENST00000395946 FYCO1Q9BQS8 1478 aa11.48□□□□□ -0.57
XCR1-202ENST00000395946 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
XCR1-202ENST00000395946 UHRF1BP1Q6BDS2 1440 aa11.47□□□□□ -0.57
XCR1-202ENST00000395946 CNTLNQ9NXG0 1405 aa11.47□□□□□ -0.57
XCR1-202ENST00000395946 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
XCR1-202ENST00000395946 MLECQ14165 292 aa11.45□□□□□ -0.58
XCR1-202ENST00000395946 HSPA2P54652 639 aa11.44□□□□□ -0.58
XCR1-202ENST00000395946 ABCA6Q8N139 1617 aa11.44□□□□□ -0.58
XCR1-202ENST00000395946 CDC42BPBQ9Y5S2 1711 aa11.43□□□□□ -0.58
XCR1-202ENST00000395946 AFAP1Q8N556 730 aa11.43□□□□□ -0.58
XCR1-202ENST00000395946 CERKQ8TCT0 537 aa11.43□□□□□ -0.58
XCR1-202ENST00000395946 PLEKHH2Q8IVE3 1493 aa11.43□□□□□ -0.58
XCR1-202ENST00000395946 LRRIQ1Q96JM4 1722 aa11.43□□□□□ -0.58
XCR1-202ENST00000395946 ITSN2Q9NZM3 1697 aa11.43□□□□□ -0.58
XCR1-202ENST00000395946 PTPRTO14522 1441 aa11.42□□□□□ -0.58
XCR1-202ENST00000395946 NPATQ14207 1427 aa11.42□□□□□ -0.58
XCR1-202ENST00000395946 ESF1Q9H501 851 aaKnown RBP11.41□□□□□ -0.58
XCR1-202ENST00000395946 KIAA1107Q9UPP5 1409 aa11.41□□□□□ -0.58
XCR1-202ENST00000395946 TRAPPC8Q9Y2L5 1435 aa11.41□□□□□ -0.58
XCR1-202ENST00000395946 SETD1BQ9UPS6 1966 aaKnown RBP11.41□□□□□ -0.58
XCR1-202ENST00000395946 MYT1LQ9UL68 1186 aa11.4□□□□□ -0.58
XCR1-202ENST00000395946 IQSEC2Q5JU85 1478 aa11.39□□□□□ -0.59
XCR1-202ENST00000395946 MROH2AA6NES4 1674 aa11.39□□□□□ -0.59
XCR1-202ENST00000395946 KIDINS220Q9ULH0 1771 aa11.39□□□□□ -0.59
XCR1-202ENST00000395946 CDC42BPAQ5VT25 1732 aa11.38□□□□□ -0.59
XCR1-202ENST00000395946 SAMD9LQ8IVG5 1584 aa11.38□□□□□ -0.59
XCR1-202ENST00000395946 C3P01024 1663 aa11.38□□□□□ -0.59
XCR1-202ENST00000395946 GPATCH8Q9UKJ3 1502 aaKnown RBP11.37□□□□□ -0.59
XCR1-202ENST00000395946 SYCP2Q9BX26 1530 aa11.36□□□□□ -0.59
XCR1-202ENST00000395946 MSH5O43196 834 aa11.36□□□□□ -0.59
XCR1-202ENST00000395946 CEBPAP49715 358 aaPredicted RBP11.36□□□□□ -0.59
XCR1-202ENST00000395946 PLXNC1O60486 1568 aa11.36□□□□□ -0.59
XCR1-202ENST00000395946 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
XCR1-202ENST00000395946 SPAG9O60271 1321 aaKnown RBP11.35□□□□□ -0.59
XCR1-202ENST00000395946 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
XCR1-202ENST00000395946 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
XCR1-202ENST00000395946 INO80Q9ULG1 1556 aaPredicted RBP11.35□□□□□ -0.59
XCR1-202ENST00000395946 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
XCR1-202ENST00000395946 FAM135AQ9P2D6 1515 aa11.34□□□□□ -0.59
XCR1-202ENST00000395946 A2MP01023 1474 aa11.33□□□□□ -0.6
XCR1-202ENST00000395946 PLA2R1Q13018 1463 aa11.33□□□□□ -0.6
XCR1-202ENST00000395946 CCNB3Q8WWL7 1395 aa11.33□□□□□ -0.6
XCR1-202ENST00000395946 EHBP1L1Q8N3D4 1523 aa11.33□□□□□ -0.6
XCR1-202ENST00000395946 MTUS2Q5JR59 1369 aa11.32□□□□□ -0.6
XCR1-202ENST00000395946 CFDP1Q9UEE9 299 aaPredicted RBP11.32□□□□□ -0.6
XCR1-202ENST00000395946 RTEL1-TNFRSF6BF6WH68 1400 aa11.32□□□□□ -0.6
XCR1-202ENST00000395946 ZMYM3Q14202 1370 aa11.31□□□□□ -0.6
XCR1-202ENST00000395946 ZNF142P52746 1687 aaPredicted RBP11.31□□□□□ -0.6
XCR1-202ENST00000395946 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
XCR1-202ENST00000395946 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
XCR1-202ENST00000395946 ADGBQ8N7X0 1667 aa11.3□□□□□ -0.6
XCR1-202ENST00000395946 PKD2Q13563 968 aa11.29□□□□□ -0.6
XCR1-202ENST00000395946 ZNF777Q9ULD5 760 aaPredicted RBP11.29□□□□□ -0.6
XCR1-202ENST00000395946 CAMSAP1Q5T5Y3 1602 aa11.28□□□□□ -0.6
XCR1-202ENST00000395946 TIAM1Q13009 1591 aa11.28□□□□□ -0.6
XCR1-202ENST00000395946 MYO3AQ8NEV4 1616 aa11.27□□□□□ -0.6
XCR1-202ENST00000395946 PTPRKQ15262 1439 aa11.27□□□□□ -0.6
XCR1-202ENST00000395946 TCOF1Q13428 1488 aaKnown RBP11.27□□□□□ -0.6
XCR1-202ENST00000395946 MBD5Q9P267 1494 aa11.27□□□□□ -0.6
XCR1-202ENST00000395946 HNRNPMP52272 730 aaKnown RBP eCLIP11.27□□□□□ -0.61
XCR1-202ENST00000395946 RSPH4AQ5TD94 716 aa11.27□□□□□ -0.61
XCR1-202ENST00000395946 CEP170BQ9Y4F5 1589 aaPredicted RBP11.27□□□□□ -0.61
XCR1-202ENST00000395946 SUPT6HQ7KZ85 1726 aaKnown RBP11.25□□□□□ -0.61
XCR1-202ENST00000395946 DHX29Q7Z478 1369 aaKnown RBP11.25□□□□□ -0.61
XCR1-202ENST00000395946 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
XCR1-202ENST00000395946 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
XCR1-202ENST00000395946 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
XCR1-202ENST00000395946 KDM5DQ9BY66 1539 aa11.23□□□□□ -0.61
XCR1-202ENST00000395946 PZPP20742 1482 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms