RNA–Protein interactions for RNA: ENST00000395667.7

CDRT1-203, CMT1A duplicated region transcript 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDRT1, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-203ENST00000395667 ROCK1Q13464 1354 aa12.97□□□□□ -0.33
CDRT1-203ENST00000395667 ABCC5O15440 1437 aa12.97□□□□□ -0.33
CDRT1-203ENST00000395667 SYNJ2O15056 1496 aa12.96□□□□□ -0.33
CDRT1-203ENST00000395667 CFDP1Q9UEE9 299 aaPredicted RBP12.96□□□□□ -0.34
CDRT1-203ENST00000395667 PRG4Q92954 1404 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-203ENST00000395667 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
CDRT1-203ENST00000395667 DNMT1P26358 1616 aaKnown RBP12.95□□□□□ -0.34
CDRT1-203ENST00000395667 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
CDRT1-203ENST00000395667 TROQ12816 1431 aaPredicted RBP12.95□□□□□ -0.34
CDRT1-203ENST00000395667 EIF4G2P78344 907 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDRT1-203ENST00000395667 ZNF777Q9ULD5 760 aaPredicted RBP12.94□□□□□ -0.34
CDRT1-203ENST00000395667 PLB1Q6P1J6 1458 aa12.94□□□□□ -0.34
CDRT1-203ENST00000395667 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
CDRT1-203ENST00000395667 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
CDRT1-203ENST00000395667 CEP170Q5SW79 1584 aa12.94□□□□□ -0.34
CDRT1-203ENST00000395667 JPH4Q96JJ6 628 aa12.93□□□□□ -0.34
CDRT1-203ENST00000395667 WASHC2AQ641Q2 1341 aa12.91□□□□□ -0.34
CDRT1-203ENST00000395667 ANKRD30BQ9BXX2 1392 aa12.91□□□□□ -0.34
CDRT1-203ENST00000395667 CAMSAP2Q08AD1 1489 aa12.9□□□□□ -0.34
CDRT1-203ENST00000395667 FKBP8Q14318 412 aa12.88□□□□□ -0.35
CDRT1-203ENST00000395667 ITSN2Q9NZM3 1697 aa12.88□□□□□ -0.35
CDRT1-203ENST00000395667 GPATCH8Q9UKJ3 1502 aaKnown RBP12.88□□□□□ -0.35
CDRT1-203ENST00000395667 RPRD2Q5VT52 1461 aaKnown RBP12.88□□□□□ -0.35
CDRT1-203ENST00000395667 NEFLP07196 543 aa12.88□□□□□ -0.35
CDRT1-203ENST00000395667 BCANQ96GW7 911 aa12.88□□□□□ -0.35
CDRT1-203ENST00000395667 NUP160Q12769 1436 aa12.88□□□□□ -0.35
CDRT1-203ENST00000395667 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
CDRT1-203ENST00000395667 KIF14Q15058 1648 aa12.87□□□□□ -0.35
CDRT1-203ENST00000395667 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
CDRT1-203ENST00000395667 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
CDRT1-203ENST00000395667 ANKRD30AQ9BXX3 1397 aa12.84□□□□□ -0.35
CDRT1-203ENST00000395667 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
CDRT1-203ENST00000395667 TEX14Q8IWB6 1497 aa12.84□□□□□ -0.35
CDRT1-203ENST00000395667 ADGBQ8N7X0 1667 aa12.83□□□□□ -0.36
CDRT1-203ENST00000395667 HNRNPUQ00839 825 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDRT1-203ENST00000395667 PZPP20742 1482 aa12.83□□□□□ -0.36
CDRT1-203ENST00000395667 CNTLNQ9NXG0 1405 aa12.82□□□□□ -0.36
CDRT1-203ENST00000395667 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
CDRT1-203ENST00000395667 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
CDRT1-203ENST00000395667 PKD2Q13563 968 aa12.81□□□□□ -0.36
CDRT1-203ENST00000395667 ADGRL2O95490 1459 aa12.81□□□□□ -0.36
CDRT1-203ENST00000395667 ZNF326Q5BKZ1 582 aaKnown RBP12.8□□□□□ -0.36
CDRT1-203ENST00000395667 ANKRD50Q9ULJ7 1429 aa12.8□□□□□ -0.36
CDRT1-203ENST00000395667 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
CDRT1-203ENST00000395667 ATP10BO94823 1461 aa12.8□□□□□ -0.36
CDRT1-203ENST00000395667 ABCA8O94911 1581 aa12.8□□□□□ -0.36
CDRT1-203ENST00000395667 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
CDRT1-203ENST00000395667 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
CDRT1-203ENST00000395667 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
CDRT1-203ENST00000395667 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
CDRT1-203ENST00000395667 C9orf84Q5VXU9 1444 aa12.77□□□□□ -0.36
CDRT1-203ENST00000395667 TSHZ2Q9NRE2 1034 aa12.77□□□□□ -0.36
CDRT1-203ENST00000395667 NUP155O75694 1391 aa12.77□□□□□ -0.37
CDRT1-203ENST00000395667 ABCC10Q5T3U5 1492 aa12.77□□□□□ -0.37
CDRT1-203ENST00000395667 PTPRGP23470 1445 aa12.77□□□□□ -0.37
CDRT1-203ENST00000395667 KIF7Q2M1P5 1343 aa12.76□□□□□ -0.37
CDRT1-203ENST00000395667 PRKRIP1Q9H875 184 aaPredicted RBP12.76□□□□□ -0.37
CDRT1-203ENST00000395667 HNRNPMP52272 730 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDRT1-203ENST00000395667 SPATA31E1Q6ZUB1 1445 aa12.75□□□□□ -0.37
CDRT1-203ENST00000395667 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
CDRT1-203ENST00000395667 CCDC184Q52MB2 194 aa12.74□□□□□ -0.37
CDRT1-203ENST00000395667 MRS2Q9HD23 443 aa12.74□□□□□ -0.37
CDRT1-203ENST00000395667 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
CDRT1-203ENST00000395667 FAM9BQ8IZU0 186 aa12.73□□□□□ -0.37
CDRT1-203ENST00000395667 USP47Q96K76 1375 aa12.72□□□□□ -0.37
CDRT1-203ENST00000395667 KIF15Q9NS87 1388 aa12.72□□□□□ -0.37
CDRT1-203ENST00000395667 MBD5Q9P267 1494 aa12.71□□□□□ -0.37
CDRT1-203ENST00000395667 CNGB1Q14028 1251 aaPredicted RBP12.7□□□□□ -0.38
CDRT1-203ENST00000395667 POLR1AO95602 1720 aaPredicted RBP12.69□□□□□ -0.38
CDRT1-203ENST00000395667 KDM2AQ9Y2K7 1162 aa12.69□□□□□ -0.38
CDRT1-203ENST00000395667 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
CDRT1-203ENST00000395667 ARHGEF5Q12774 1597 aa12.67□□□□□ -0.38
CDRT1-203ENST00000395667 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
CDRT1-203ENST00000395667 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
CDRT1-203ENST00000395667 MYT1Q01538 1121 aa12.67□□□□□ -0.38
CDRT1-203ENST00000395667 RSPH4AQ5TD94 716 aa12.66□□□□□ -0.38
CDRT1-203ENST00000395667 CHD1O14646 1710 aa12.65□□□□□ -0.38
CDRT1-203ENST00000395667 KDM5DQ9BY66 1539 aa12.65□□□□□ -0.38
CDRT1-203ENST00000395667 DCAF11Q8TEB1 546 aa12.65□□□□□ -0.38
CDRT1-203ENST00000395667 SAMD9LQ8IVG5 1584 aa12.65□□□□□ -0.38
CDRT1-203ENST00000395667 UHRF1BP1Q6BDS2 1440 aa12.64□□□□□ -0.39
CDRT1-203ENST00000395667 PREX2Q70Z35 1606 aa12.64□□□□□ -0.39
CDRT1-203ENST00000395667 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
CDRT1-203ENST00000395667 RALGAPBQ86X10 1494 aa12.64□□□□□ -0.39
CDRT1-203ENST00000395667 BCORL1Q5H9F3 1711 aa12.64□□□□□ -0.39
CDRT1-203ENST00000395667 KDM5CP41229 1560 aa12.63□□□□□ -0.39
CDRT1-203ENST00000395667 ARID4BQ4LE39 1312 aaPredicted RBP12.63□□□□□ -0.39
CDRT1-203ENST00000395667 ARHGAP5Q13017 1502 aa12.63□□□□□ -0.39
CDRT1-203ENST00000395667 ARHGEF12Q9NZN5 1544 aa12.63□□□□□ -0.39
CDRT1-203ENST00000395667 ZBED9Q6R2W3 1325 aa12.63□□□□□ -0.39
CDRT1-203ENST00000395667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDRT1-203ENST00000395667 DHX29Q7Z478 1369 aaKnown RBP12.62□□□□□ -0.39
CDRT1-203ENST00000395667 SYCP2Q9BX26 1530 aa12.62□□□□□ -0.39
CDRT1-203ENST00000395667 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
CDRT1-203ENST00000395667 ST20-MTHFSA0A0A6YYL1 179 aa12.61□□□□□ -0.39
CDRT1-203ENST00000395667 ROCK2O75116 1388 aaKnown RBP12.6□□□□□ -0.39
CDRT1-203ENST00000395667 TTC37Q6PGP7 1564 aa12.6□□□□□ -0.39
CDRT1-203ENST00000395667 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
CDRT1-203ENST00000395667 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
CDRT1-203ENST00000395667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms