RNA–Protein interactions for RNA: ENST00000395522.6

SPECC1-202, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-202ENST00000395522 GRIN2BQ13224 1484 aa19.9■□□□□ 0.78
SPECC1-202ENST00000395522 KDM2AQ9Y2K7 1162 aa19.89■□□□□ 0.77
SPECC1-202ENST00000395522 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
SPECC1-202ENST00000395522 CCDC136Q96JN2 1154 aa19.86■□□□□ 0.77
SPECC1-202ENST00000395522 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
SPECC1-202ENST00000395522 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
SPECC1-202ENST00000395522 CUL7Q14999 1698 aa19.83■□□□□ 0.77
SPECC1-202ENST00000395522 EHBP1L1Q8N3D4 1523 aa19.83■□□□□ 0.76
SPECC1-202ENST00000395522 UGGT2Q9NYU1 1516 aa19.83■□□□□ 0.76
SPECC1-202ENST00000395522 NCOA1Q15788 1441 aa19.81■□□□□ 0.76
SPECC1-202ENST00000395522 DEKP35659 375 aaKnown RBP19.8■□□□□ 0.76
SPECC1-202ENST00000395522 FBLN2P98095 1184 aa19.8■□□□□ 0.76
SPECC1-202ENST00000395522 PDS5BQ9NTI5 1447 aa19.79■□□□□ 0.76
SPECC1-202ENST00000395522 TMC1Q8TDI8 760 aa19.78■□□□□ 0.76
SPECC1-202ENST00000395522 THOC2Q8NI27 1593 aaKnown RBP19.78■□□□□ 0.76
SPECC1-202ENST00000395522 EPRSP07814 1512 aaKnown RBP19.78■□□□□ 0.76
SPECC1-202ENST00000395522 ANKRD30BQ9BXX2 1392 aa19.77■□□□□ 0.76
SPECC1-202ENST00000395522 PKD2Q13563 968 aa19.77■□□□□ 0.76
SPECC1-202ENST00000395522 SAMD9Q5K651 1589 aa19.76■□□□□ 0.75
SPECC1-202ENST00000395522 NOP58Q9Y2X3 529 aaKnown RBP19.76■□□□□ 0.75
SPECC1-202ENST00000395522 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
SPECC1-202ENST00000395522 SKAP1Q86WV1 359 aa19.73■□□□□ 0.75
SPECC1-202ENST00000395522 USP47Q96K76 1375 aa19.72■□□□□ 0.75
SPECC1-202ENST00000395522 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
SPECC1-202ENST00000395522 NUDCQ9Y266 331 aa19.71■□□□□ 0.75
SPECC1-202ENST00000395522 DAPK1P53355 1430 aa19.7■□□□□ 0.74
SPECC1-202ENST00000395522 CARD11Q9BXL7 1154 aa19.7■□□□□ 0.74
SPECC1-202ENST00000395522 ABCC5O15440 1437 aa19.69■□□□□ 0.74
SPECC1-202ENST00000395522 RPRD2Q5VT52 1461 aaKnown RBP19.69■□□□□ 0.74
SPECC1-202ENST00000395522 HECW1Q76N89 1606 aa19.68■□□□□ 0.74
SPECC1-202ENST00000395522 ST20-MTHFSA0A0A6YYL1 179 aa19.67■□□□□ 0.74
SPECC1-202ENST00000395522 TEX14Q8IWB6 1497 aa19.66■□□□□ 0.74
SPECC1-202ENST00000395522 RGL3Q3MIN7 710 aa19.66■□□□□ 0.74
SPECC1-202ENST00000395522 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
SPECC1-202ENST00000395522 ERICH6BQ5W0A0 696 aa19.66■□□□□ 0.74
SPECC1-202ENST00000395522 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
SPECC1-202ENST00000395522 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
SPECC1-202ENST00000395522 PRG4Q92954 1404 aaPredicted RBP19.65■□□□□ 0.74
SPECC1-202ENST00000395522 ARHGEF11O15085 1522 aa19.65■□□□□ 0.74
SPECC1-202ENST00000395522 EXOC6Q8TAG9 804 aa19.65■□□□□ 0.74
SPECC1-202ENST00000395522 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
SPECC1-202ENST00000395522 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
SPECC1-202ENST00000395522 GCC2Q8IWJ2 1684 aa19.64■□□□□ 0.73
SPECC1-202ENST00000395522 DHX29Q7Z478 1369 aaKnown RBP19.64■□□□□ 0.73
SPECC1-202ENST00000395522 SPATA31E1Q6ZUB1 1445 aa19.63■□□□□ 0.73
SPECC1-202ENST00000395522 PLIN1O60240 522 aa19.63■□□□□ 0.73
SPECC1-202ENST00000395522 PNISRQ8TF01 805 aaKnown RBP19.62■□□□□ 0.73
SPECC1-202ENST00000395522 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
SPECC1-202ENST00000395522 IQGAP2Q13576 1575 aa19.59■□□□□ 0.73
SPECC1-202ENST00000395522 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
SPECC1-202ENST00000395522 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
SPECC1-202ENST00000395522 CDCA7LQ96GN5 454 aa19.59■□□□□ 0.73
SPECC1-202ENST00000395522 RTN4Q9NQC3 1192 aaKnown RBP19.58■□□□□ 0.73
SPECC1-202ENST00000395522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.57■□□□□ 0.72
SPECC1-202ENST00000395522 NUP155O75694 1391 aa19.57■□□□□ 0.72
SPECC1-202ENST00000395522 SMG6Q86US8 1419 aaKnown RBP19.57■□□□□ 0.72
SPECC1-202ENST00000395522 RTL5Q5HYW3 569 aaPredicted RBP19.56■□□□□ 0.72
SPECC1-202ENST00000395522 BCORL1Q5H9F3 1711 aa19.56■□□□□ 0.72
SPECC1-202ENST00000395522 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
SPECC1-202ENST00000395522 ZNF608Q9ULD9 1512 aaPredicted RBP19.55■□□□□ 0.72
SPECC1-202ENST00000395522 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
SPECC1-202ENST00000395522 WDR62O43379 1518 aa19.54■□□□□ 0.72
SPECC1-202ENST00000395522 PZPP20742 1482 aa19.54■□□□□ 0.72
SPECC1-202ENST00000395522 HNRNPMP52272 730 aaKnown RBP eCLIP19.53■□□□□ 0.72
SPECC1-202ENST00000395522 NUP153P49790 1475 aaKnown RBP19.51■□□□□ 0.71
SPECC1-202ENST00000395522 PLB1Q6P1J6 1458 aa19.5■□□□□ 0.71
SPECC1-202ENST00000395522 RCAN3Q9UKA8 241 aa19.5■□□□□ 0.71
SPECC1-202ENST00000395522 RRP1P56182 461 aaKnown RBP19.5■□□□□ 0.71
SPECC1-202ENST00000395522 NBPF1Q3BBV0 1214 aa19.5■□□□□ 0.71
SPECC1-202ENST00000395522 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
SPECC1-202ENST00000395522 ROCK1Q13464 1354 aa19.48■□□□□ 0.71
SPECC1-202ENST00000395522 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
SPECC1-202ENST00000395522 KIAA1107Q9UPP5 1409 aa19.48■□□□□ 0.71
SPECC1-202ENST00000395522 SLC4A3P48751 1232 aa19.46■□□□□ 0.71
SPECC1-202ENST00000395522 ROCK2O75116 1388 aaKnown RBP19.46■□□□□ 0.71
SPECC1-202ENST00000395522 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
SPECC1-202ENST00000395522 ANKRD50Q9ULJ7 1429 aa19.45■□□□□ 0.7
SPECC1-202ENST00000395522 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
SPECC1-202ENST00000395522 TSPY4P0CV99 314 aa19.44■□□□□ 0.7
SPECC1-202ENST00000395522 TSPY10P0CW01 314 aa19.44■□□□□ 0.7
SPECC1-202ENST00000395522 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
SPECC1-202ENST00000395522 PDE4AP27815 886 aa19.42■□□□□ 0.7
SPECC1-202ENST00000395522 IL27Q8NEV9 243 aa19.42■□□□□ 0.7
SPECC1-202ENST00000395522 ANKRD30AQ9BXX3 1397 aa19.42■□□□□ 0.7
SPECC1-202ENST00000395522 KIF15Q9NS87 1388 aa19.42■□□□□ 0.7
SPECC1-202ENST00000395522 NEFMP07197 916 aa19.42■□□□□ 0.7
SPECC1-202ENST00000395522 DISP1Q96F81 1524 aa19.42■□□□□ 0.7
SPECC1-202ENST00000395522 PBRM1Q86U86 1689 aa19.42■□□□□ 0.7
SPECC1-202ENST00000395522 RNF123Q5XPI4 1314 aa19.41■□□□□ 0.7
SPECC1-202ENST00000395522 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
SPECC1-202ENST00000395522 C20orf194Q5TEA3 1177 aa19.4■□□□□ 0.7
SPECC1-202ENST00000395522 KIF14Q15058 1648 aa19.4■□□□□ 0.7
SPECC1-202ENST00000395522 ADAMTS12P58397 1594 aa19.39■□□□□ 0.7
SPECC1-202ENST00000395522 CRBNQ96SW2 442 aa19.39■□□□□ 0.69
SPECC1-202ENST00000395522 GPATCH8Q9UKJ3 1502 aaKnown RBP19.39■□□□□ 0.69
SPECC1-202ENST00000395522 TROQ12816 1431 aaPredicted RBP19.37■□□□□ 0.69
SPECC1-202ENST00000395522 PANK3Q9H999 370 aa19.35■□□□□ 0.69
SPECC1-202ENST00000395522 KDM5CP41229 1560 aa19.35■□□□□ 0.69
SPECC1-202ENST00000395522 NLRP13Q86W25 1043 aa19.35■□□□□ 0.69
SPECC1-202ENST00000395522 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 261.3 ms