RNA–Protein interactions for RNA: ENST00000394825.5

NR4A1-204, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR4A1, Length 2,528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-204ENST00000394825 ARHGEF11O15085 1522 aa22.25■■□□□ 1.15
NR4A1-204ENST00000394825 MAGI3Q5TCQ9 1506 aa22.25■■□□□ 1.15
NR4A1-204ENST00000394825 NCOA2Q15596 1464 aa22.25■■□□□ 1.15
NR4A1-204ENST00000394825 PRG4Q92954 1404 aaPredicted RBP22.25■■□□□ 1.15
NR4A1-204ENST00000394825 CDK13Q14004 1512 aaKnown RBP22.24■■□□□ 1.15
NR4A1-204ENST00000394825 IRX6P78412 446 aaPredicted RBP22.24■■□□□ 1.15
NR4A1-204ENST00000394825 CLASP1Q7Z460 1538 aa22.23■■□□□ 1.15
NR4A1-204ENST00000394825 ABCA8O94911 1581 aa22.22■■□□□ 1.15
NR4A1-204ENST00000394825 FGD6Q6ZV73 1430 aa22.2■■□□□ 1.14
NR4A1-204ENST00000394825 PLB1Q6P1J6 1458 aa22.2■■□□□ 1.14
NR4A1-204ENST00000394825 MYOM3Q5VTT5 1437 aa22.19■■□□□ 1.14
NR4A1-204ENST00000394825 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.17■■□□□ 1.14
NR4A1-204ENST00000394825 TIMELESSQ9UNS1 1208 aa22.17■■□□□ 1.14
NR4A1-204ENST00000394825 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
NR4A1-204ENST00000394825 IPO9Q96P70 1041 aaKnown RBP22.15■■□□□ 1.14
NR4A1-204ENST00000394825 PTPRGP23470 1445 aa22.14■■□□□ 1.14
NR4A1-204ENST00000394825 HNRNPUQ00839 825 aaKnown RBP eCLIP22.14■■□□□ 1.143e-6■□□□□ 8.3
NR4A1-204ENST00000394825 RAB3GAP2Q9H2M9 1393 aa22.13■■□□□ 1.13
NR4A1-204ENST00000394825 C11orf95C9JLR9 678 aaPredicted RBP22.13■■□□□ 1.13
NR4A1-204ENST00000394825 RTN4Q9NQC3 1192 aaKnown RBP22.13■■□□□ 1.13
NR4A1-204ENST00000394825 FAM50AQ14320 339 aaKnown RBP22.1■■□□□ 1.13
NR4A1-204ENST00000394825 ADCY10Q96PN6 1610 aa22.1■■□□□ 1.13
NR4A1-204ENST00000394825 TROQ12816 1431 aaPredicted RBP22.09■■□□□ 1.13
NR4A1-204ENST00000394825 MIA2Q96PC5 1412 aa22.09■■□□□ 1.13
NR4A1-204ENST00000394825 ANP32AP39687 249 aaKnown RBP22.09■■□□□ 1.13
NR4A1-204ENST00000394825 PTPN23Q9H3S7 1636 aa22.09■■□□□ 1.13
NR4A1-204ENST00000394825 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
NR4A1-204ENST00000394825 B4GALNT3Q6L9W6 998 aa22.07■■□□□ 1.12
NR4A1-204ENST00000394825 ZBTB47Q9UFB7 747 aaPredicted RBP22.07■■□□□ 1.12
NR4A1-204ENST00000394825 ARID3CA6NKF2 412 aa22.04■■□□□ 1.12
NR4A1-204ENST00000394825 WASHC2CQ9Y4E1 1318 aa22.04■■□□□ 1.12
NR4A1-204ENST00000394825 UACAQ9BZF9 1416 aa22.04■■□□□ 1.12
NR4A1-204ENST00000394825 ATP10BO94823 1461 aa22.03■■□□□ 1.12
NR4A1-204ENST00000394825 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
NR4A1-204ENST00000394825 ERCC6L2Q5T890 1561 aa22.02■■□□□ 1.12
NR4A1-204ENST00000394825 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
NR4A1-204ENST00000394825 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
NR4A1-204ENST00000394825 ABCC2Q92887 1545 aa21.99■■□□□ 1.11
NR4A1-204ENST00000394825 SIN3AQ96ST3 1273 aa21.99■■□□□ 1.11
NR4A1-204ENST00000394825 KIF14Q15058 1648 aa21.98■■□□□ 1.11
NR4A1-204ENST00000394825 HIRIP3Q9BW71 556 aaPredicted RBP21.97■■□□□ 1.11
NR4A1-204ENST00000394825 PLEKHD1A6NEE1 506 aa21.97■■□□□ 1.11
NR4A1-204ENST00000394825 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
NR4A1-204ENST00000394825 HFM1A2PYH4 1435 aa21.9■■□□□ 1.1
NR4A1-204ENST00000394825 ABCC10Q5T3U5 1492 aa21.89■■□□□ 1.09
NR4A1-204ENST00000394825 AKNAQ7Z591 1439 aa21.89■■□□□ 1.09
NR4A1-204ENST00000394825 GPATCH8Q9UKJ3 1502 aaKnown RBP21.89■■□□□ 1.09
NR4A1-204ENST00000394825 PTPRKQ15262 1439 aa21.89■■□□□ 1.09
NR4A1-204ENST00000394825 OSCARQ8IYS5 282 aa21.88■■□□□ 1.09
NR4A1-204ENST00000394825 PKNOX2Q96KN3 472 aa21.87■■□□□ 1.09
NR4A1-204ENST00000394825 DNMT1P26358 1616 aaKnown RBP21.87■■□□□ 1.09
NR4A1-204ENST00000394825 CDC42BPAQ5VT25 1732 aa21.86■■□□□ 1.09
NR4A1-204ENST00000394825 ZBED9Q6R2W3 1325 aa21.85■■□□□ 1.09
NR4A1-204ENST00000394825 NEFMP07197 916 aa21.84■■□□□ 1.09
NR4A1-204ENST00000394825 GCC2Q8IWJ2 1684 aa21.84■■□□□ 1.09
NR4A1-204ENST00000394825 KDM5BQ9UGL1 1544 aa21.84■■□□□ 1.09
NR4A1-204ENST00000394825 EIF5BO60841 1220 aaKnown RBP21.84■■□□□ 1.09
NR4A1-204ENST00000394825 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.09
NR4A1-204ENST00000394825 CAMSAP2Q08AD1 1489 aa21.82■■□□□ 1.08
NR4A1-204ENST00000394825 CFDP1Q9UEE9 299 aaPredicted RBP21.81■■□□□ 1.08
NR4A1-204ENST00000394825 DAPK1P53355 1430 aa21.81■■□□□ 1.08
NR4A1-204ENST00000394825 NAIPQ13075 1403 aa21.81■■□□□ 1.08
NR4A1-204ENST00000394825 PPM1GO15355 546 aaPredicted RBP21.8■■□□□ 1.08
NR4A1-204ENST00000394825 ROCK1Q13464 1354 aa21.79■■□□□ 1.08
NR4A1-204ENST00000394825 RSPH6AQ9H0K4 717 aa21.79■■□□□ 1.08
NR4A1-204ENST00000394825 BRPF3Q9ULD4 1205 aa21.78■■□□□ 1.08
NR4A1-204ENST00000394825 PREX2Q70Z35 1606 aa21.77■■□□□ 1.08
NR4A1-204ENST00000394825 ABCC5O15440 1437 aa21.77■■□□□ 1.08
NR4A1-204ENST00000394825 CROCC2H7BZ55 1655 aa21.76■■□□□ 1.07
NR4A1-204ENST00000394825 ADGBQ8N7X0 1667 aa21.74■■□□□ 1.07
NR4A1-204ENST00000394825 RNF123Q5XPI4 1314 aa21.73■■□□□ 1.07
NR4A1-204ENST00000394825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.72■■□□□ 1.07
NR4A1-204ENST00000394825 ZNF644Q9H582 1327 aaPredicted RBP21.72■■□□□ 1.07
NR4A1-204ENST00000394825 GSE1Q14687 1217 aa21.72■■□□□ 1.07
NR4A1-204ENST00000394825 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
NR4A1-204ENST00000394825 TONSLQ96HA7 1378 aa21.71■■□□□ 1.07
NR4A1-204ENST00000394825 MYO5CQ9NQX4 1742 aa21.71■■□□□ 1.07
NR4A1-204ENST00000394825 LAS1LQ9Y4W2 734 aaKnown RBP21.71■■□□□ 1.07
NR4A1-204ENST00000394825 TTC37Q6PGP7 1564 aa21.7■■□□□ 1.06
NR4A1-204ENST00000394825 SMG6Q86US8 1419 aaKnown RBP21.7■■□□□ 1.06
NR4A1-204ENST00000394825 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
NR4A1-204ENST00000394825 ARHGEF5Q12774 1597 aa21.69■■□□□ 1.06
NR4A1-204ENST00000394825 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
NR4A1-204ENST00000394825 CCDC184Q52MB2 194 aa21.67■■□□□ 1.06
NR4A1-204ENST00000394825 CHIC2Q9UKJ5 165 aa21.67■■□□□ 1.06
NR4A1-204ENST00000394825 ZNF777Q9ULD5 760 aaPredicted RBP21.65■■□□□ 1.06
NR4A1-204ENST00000394825 SAMD9LQ8IVG5 1584 aa21.65■■□□□ 1.06
NR4A1-204ENST00000394825 RRP7BPQ9NSQ0 103 aa21.65■■□□□ 1.06
NR4A1-204ENST00000394825 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.05
NR4A1-204ENST00000394825 PLEKHH2Q8IVE3 1493 aa21.63■■□□□ 1.05
NR4A1-204ENST00000394825 FAM43AQ8N2R8 423 aa21.63■■□□□ 1.05
NR4A1-204ENST00000394825 ARHGAP5Q13017 1502 aa21.62■■□□□ 1.05
NR4A1-204ENST00000394825 WDR7Q9Y4E6 1490 aa21.62■■□□□ 1.05
NR4A1-204ENST00000394825 GLIPR1L2Q4G1C9 344 aa21.62■■□□□ 1.05
NR4A1-204ENST00000394825 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
NR4A1-204ENST00000394825 RSPH4AQ5TD94 716 aa21.61■■□□□ 1.05
NR4A1-204ENST00000394825 NCOA1Q15788 1441 aa21.61■■□□□ 1.05
NR4A1-204ENST00000394825 FAM9BQ8IZU0 186 aa21.61■■□□□ 1.05
NR4A1-204ENST00000394825 MBD5Q9P267 1494 aa21.6■■□□□ 1.05
NR4A1-204ENST00000394825 TCERG1O14776 1098 aaKnown RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms