RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 CAMSAP2Q08AD1 1489 aa25.34■■□□□ 1.65
SLC6A4-202ENST00000394821 ASXL2Q76L83 1435 aa25.33■■□□□ 1.65
SLC6A4-202ENST00000394821 WDR7Q9Y4E6 1490 aa25.32■■□□□ 1.64
SLC6A4-202ENST00000394821 RAB3GAP2Q9H2M9 1393 aa25.3■■□□□ 1.64
SLC6A4-202ENST00000394821 NPM1P06748 294 aaKnown RBP eCLIP25.29■■□□□ 1.64
SLC6A4-202ENST00000394821 PREX2Q70Z35 1606 aa25.29■■□□□ 1.64
SLC6A4-202ENST00000394821 ABCC5O15440 1437 aa25.28■■□□□ 1.64
SLC6A4-202ENST00000394821 SETD5Q9C0A6 1442 aa25.28■■□□□ 1.64
SLC6A4-202ENST00000394821 DAPK1P53355 1430 aa25.27■■□□□ 1.64
SLC6A4-202ENST00000394821 MYO5CQ9NQX4 1742 aa25.26■■□□□ 1.63
SLC6A4-202ENST00000394821 DNMT1P26358 1616 aaKnown RBP25.26■■□□□ 1.63
SLC6A4-202ENST00000394821 RRP7BPQ9NSQ0 103 aa25.25■■□□□ 1.63
SLC6A4-202ENST00000394821 SAMD9LQ8IVG5 1584 aa25.24■■□□□ 1.63
SLC6A4-202ENST00000394821 ARHGAP5Q13017 1502 aa25.23■■□□□ 1.63
SLC6A4-202ENST00000394821 HNRNPMP52272 730 aaKnown RBP eCLIP25.22■■□□□ 1.63
SLC6A4-202ENST00000394821 NAIPQ13075 1403 aa25.2■■□□□ 1.62
SLC6A4-202ENST00000394821 HFM1A2PYH4 1435 aa25.19■■□□□ 1.62
SLC6A4-202ENST00000394821 PLCH2O75038 1416 aa25.19■■□□□ 1.62
SLC6A4-202ENST00000394821 DHX57Q6P158 1386 aaKnown RBP25.17■■□□□ 1.62
SLC6A4-202ENST00000394821 ABCA9Q8IUA7 1624 aa25.15■■□□□ 1.62
SLC6A4-202ENST00000394821 KDM6BO15054 1643 aa25.15■■□□□ 1.62
SLC6A4-202ENST00000394821 MBD5Q9P267 1494 aa25.15■■□□□ 1.62
SLC6A4-202ENST00000394821 CROCC2H7BZ55 1655 aa25.14■■□□□ 1.62
SLC6A4-202ENST00000394821 SYCP2Q9BX26 1530 aa25.13■■□□□ 1.61
SLC6A4-202ENST00000394821 AKNAQ7Z591 1439 aa25.13■■□□□ 1.61
SLC6A4-202ENST00000394821 ARHGEF12Q9NZN5 1544 aa25.12■■□□□ 1.61
SLC6A4-202ENST00000394821 GCC2Q8IWJ2 1684 aa25.09■■□□□ 1.61
SLC6A4-202ENST00000394821 EFCAB2Q5VUJ9 269 aa25.09■■□□□ 1.61
SLC6A4-202ENST00000394821 ARHGEF5Q12774 1597 aa25.07■■□□□ 1.6
SLC6A4-202ENST00000394821 ROCK1Q13464 1354 aa25.06■■□□□ 1.6
SLC6A4-202ENST00000394821 MAPKBP1O60336 1514 aa25.06■■□□□ 1.6
SLC6A4-202ENST00000394821 NCOA1Q15788 1441 aa25.06■■□□□ 1.6
SLC6A4-202ENST00000394821 CLSPNQ9HAW4 1339 aa25.05■■□□□ 1.6
SLC6A4-202ENST00000394821 ADGBQ8N7X0 1667 aa25.05■■□□□ 1.6
SLC6A4-202ENST00000394821 C9orf84Q5VXU9 1444 aa25.04■■□□□ 1.6
SLC6A4-202ENST00000394821 FANCAO15360 1455 aa25.03■■□□□ 1.6
SLC6A4-202ENST00000394821 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
SLC6A4-202ENST00000394821 ABCC1P33527 1531 aa25.02■■□□□ 1.6
SLC6A4-202ENST00000394821 TSPY4P0CV99 314 aa25.02■■□□□ 1.6
SLC6A4-202ENST00000394821 TSPY10P0CW01 314 aa25.02■■□□□ 1.6
SLC6A4-202ENST00000394821 ARAP3Q8WWN8 1544 aa25.02■■□□□ 1.6
SLC6A4-202ENST00000394821 CD109Q6YHK3 1445 aa25.01■■□□□ 1.59
SLC6A4-202ENST00000394821 KIAA1107Q9UPP5 1409 aa25.01■■□□□ 1.59
SLC6A4-202ENST00000394821 TRAPPC8Q9Y2L5 1435 aa25.01■■□□□ 1.59
SLC6A4-202ENST00000394821 ADGRL2O95490 1459 aa25.01■■□□□ 1.59
SLC6A4-202ENST00000394821 SHANK2Q9UPX8 1470 aa25■■□□□ 1.59
SLC6A4-202ENST00000394821 PLEKHH2Q8IVE3 1493 aa24.98■■□□□ 1.59
SLC6A4-202ENST00000394821 AFAP1Q8N556 730 aa24.97■■□□□ 1.59
SLC6A4-202ENST00000394821 ANKRD30AQ9BXX3 1397 aa24.97■■□□□ 1.59
SLC6A4-202ENST00000394821 RSPH4AQ5TD94 716 aa24.94■■□□□ 1.58
SLC6A4-202ENST00000394821 TRIM52Q96A61 297 aa24.93■■□□□ 1.58
SLC6A4-202ENST00000394821 ADGRL1O94910 1474 aa24.92■■□□□ 1.58
SLC6A4-202ENST00000394821 FAM69CQ0P6D2 419 aa24.92■■□□□ 1.58
SLC6A4-202ENST00000394821 SCAPERQ9BY12 1400 aa24.91■■□□□ 1.58
SLC6A4-202ENST00000394821 KIF15Q9NS87 1388 aa24.91■■□□□ 1.58
SLC6A4-202ENST00000394821 DIP2BQ9P265 1576 aa24.9■■□□□ 1.58
SLC6A4-202ENST00000394821 MAP3K4Q9Y6R4 1608 aa24.9■■□□□ 1.58
SLC6A4-202ENST00000394821 MAST1Q9Y2H9 1570 aa24.89■■□□□ 1.58
SLC6A4-202ENST00000394821 ANKRD50Q9ULJ7 1429 aa24.88■■□□□ 1.57
SLC6A4-202ENST00000394821 DENND4BO75064 1496 aaPredicted RBP24.87■■□□□ 1.57
SLC6A4-202ENST00000394821 GLI2P10070 1586 aa24.86■■□□□ 1.57
SLC6A4-202ENST00000394821 SIN3AQ96ST3 1273 aa24.86■■□□□ 1.57
SLC6A4-202ENST00000394821 TSPOAP1O95153 1857 aa24.83■■□□□ 1.57
SLC6A4-202ENST00000394821 ZNF316A6NFI3 1004 aaPredicted RBP24.83■■□□□ 1.56
SLC6A4-202ENST00000394821 SPAG9O60271 1321 aaKnown RBP24.83■■□□□ 1.56
SLC6A4-202ENST00000394821 FOXD1Q16676 465 aa24.82■■□□□ 1.56
SLC6A4-202ENST00000394821 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
SLC6A4-202ENST00000394821 PLXNC1O60486 1568 aa24.8■■□□□ 1.56
SLC6A4-202ENST00000394821 ZFYVE16Q7Z3T8 1539 aa24.8■■□□□ 1.56
SLC6A4-202ENST00000394821 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
SLC6A4-202ENST00000394821 CFAP74Q9C0B2 1584 aa24.79■■□□□ 1.56
SLC6A4-202ENST00000394821 NEUROD1Q13562 356 aa24.78■■□□□ 1.56
SLC6A4-202ENST00000394821 RAPGEF3O95398 923 aa24.77■■□□□ 1.56
SLC6A4-202ENST00000394821 PPRC1Q5VV67 1664 aaKnown RBP24.77■■□□□ 1.56
SLC6A4-202ENST00000394821 PZPP20742 1482 aa24.76■■□□□ 1.55
SLC6A4-202ENST00000394821 DIEXFQ68CQ4 756 aaKnown RBP24.76■■□□□ 1.55
SLC6A4-202ENST00000394821 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
SLC6A4-202ENST00000394821 INO80Q9ULG1 1556 aaPredicted RBP24.75■■□□□ 1.55
SLC6A4-202ENST00000394821 NEO1Q92859 1461 aa24.75■■□□□ 1.55
SLC6A4-202ENST00000394821 ATP7AQ04656 1500 aa24.75■■□□□ 1.55
SLC6A4-202ENST00000394821 POGZQ7Z3K3 1410 aa24.74■■□□□ 1.55
SLC6A4-202ENST00000394821 SLC4A1APQ9BWU0 796 aaKnown RBP24.73■■□□□ 1.55
SLC6A4-202ENST00000394821 RTEL1-TNFRSF6BF6WH68 1400 aa24.73■■□□□ 1.55
SLC6A4-202ENST00000394821 ZNF518AQ6AHZ1 1483 aa24.72■■□□□ 1.55
SLC6A4-202ENST00000394821 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
SLC6A4-202ENST00000394821 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
SLC6A4-202ENST00000394821 NUP155O75694 1391 aa24.71■■□□□ 1.55
SLC6A4-202ENST00000394821 DNAJC5Q9H3Z4 198 aa24.71■■□□□ 1.55
SLC6A4-202ENST00000394821 KDM5CP41229 1560 aa24.68■■□□□ 1.54
SLC6A4-202ENST00000394821 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.68■■□□□ 1.54
SLC6A4-202ENST00000394821 RICTORQ6R327 1708 aa24.65■■□□□ 1.54
SLC6A4-202ENST00000394821 ERBINQ96RT1 1412 aa24.64■■□□□ 1.54
SLC6A4-202ENST00000394821 PKD2Q13563 968 aa24.63■■□□□ 1.53
SLC6A4-202ENST00000394821 UNC13BO14795 1591 aa24.62■■□□□ 1.53
SLC6A4-202ENST00000394821 FRMPD1Q5SYB0 1578 aa24.62■■□□□ 1.53
SLC6A4-202ENST00000394821 HECW2Q9P2P5 1572 aa24.61■■□□□ 1.53
SLC6A4-202ENST00000394821 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
SLC6A4-202ENST00000394821 MLH3Q9UHC1 1453 aa24.6■■□□□ 1.53
SLC6A4-202ENST00000394821 ANKRD30BQ9BXX2 1392 aa24.6■■□□□ 1.53
SLC6A4-202ENST00000394821 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms