RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 KDM6BO15054 1643 aa29.5■■■□□ 2.31
PRKCD-202ENST00000394729 CAMSAP2Q08AD1 1489 aa29.49■■■□□ 2.31
PRKCD-202ENST00000394729 OSCARQ8IYS5 282 aa29.49■■■□□ 2.31
PRKCD-202ENST00000394729 SHROOM2Q13796 1616 aa29.45■■■□□ 2.3
PRKCD-202ENST00000394729 CLASP1Q7Z460 1538 aa29.43■■■□□ 2.3
PRKCD-202ENST00000394729 MPHOSPH9Q99550 1183 aa29.39■■■□□ 2.29
PRKCD-202ENST00000394729 TSPY4P0CV99 314 aa29.37■■■□□ 2.29
PRKCD-202ENST00000394729 TSPY10P0CW01 314 aa29.37■■■□□ 2.29
PRKCD-202ENST00000394729 SLC4A1APQ9BWU0 796 aaKnown RBP29.36■■■□□ 2.29
PRKCD-202ENST00000394729 ABCC2Q92887 1545 aa29.34■■■□□ 2.29
PRKCD-202ENST00000394729 ABCC10Q5T3U5 1492 aa29.34■■■□□ 2.29
PRKCD-202ENST00000394729 TONSLQ96HA7 1378 aa29.32■■■□□ 2.28
PRKCD-202ENST00000394729 CDC42BPAQ5VT25 1732 aa29.31■■■□□ 2.28
PRKCD-202ENST00000394729 DNMT1P26358 1616 aaKnown RBP29.3■■■□□ 2.28
PRKCD-202ENST00000394729 ITSN2Q9NZM3 1697 aa29.27■■■□□ 2.28
PRKCD-202ENST00000394729 AKNAQ7Z591 1439 aa29.26■■■□□ 2.27
PRKCD-202ENST00000394729 YTHDC1Q96MU7 727 aaKnown RBP29.26■■■□□ 2.27
PRKCD-202ENST00000394729 ARHGAP5Q13017 1502 aa29.26■■■□□ 2.27
PRKCD-202ENST00000394729 TTC37Q6PGP7 1564 aa29.25■■■□□ 2.27
PRKCD-202ENST00000394729 ADCY10Q96PN6 1610 aa29.25■■■□□ 2.27
PRKCD-202ENST00000394729 NCOA1Q15788 1441 aa29.25■■■□□ 2.27
PRKCD-202ENST00000394729 MIER1Q8N108 512 aa29.25■■■□□ 2.27
PRKCD-202ENST00000394729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.25■■■□□ 2.27
PRKCD-202ENST00000394729 MYT1LQ9UL68 1186 aa29.25■■■□□ 2.27
PRKCD-202ENST00000394729 ANKRD30AQ9BXX3 1397 aa29.21■■■□□ 2.27
PRKCD-202ENST00000394729 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.21■■■□□ 2.27
PRKCD-202ENST00000394729 C9orf84Q5VXU9 1444 aa29.21■■■□□ 2.27
PRKCD-202ENST00000394729 DENND4BO75064 1496 aaPredicted RBP29.2■■■□□ 2.26
PRKCD-202ENST00000394729 ZCCHC11Q5TAX3 1644 aaKnown RBP29.2■■■□□ 2.26
PRKCD-202ENST00000394729 PPP1R15AO75807 674 aaPredicted RBP29.2■■■□□ 2.26
PRKCD-202ENST00000394729 ROCK1Q13464 1354 aa29.18■■■□□ 2.26
PRKCD-202ENST00000394729 GCC2Q8IWJ2 1684 aa29.18■■■□□ 2.26
PRKCD-202ENST00000394729 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
PRKCD-202ENST00000394729 NPM1P06748 294 aaKnown RBP eCLIP29.16■■■□□ 2.26
PRKCD-202ENST00000394729 PKD2Q13563 968 aa29.15■■■□□ 2.26
PRKCD-202ENST00000394729 AFAP1Q8N556 730 aa29.15■■■□□ 2.26
PRKCD-202ENST00000394729 ANKRD50Q9ULJ7 1429 aa29.14■■■□□ 2.26
PRKCD-202ENST00000394729 SYCP2Q9BX26 1530 aa29.14■■■□□ 2.26
PRKCD-202ENST00000394729 CDC42BPBQ9Y5S2 1711 aa29.14■■■□□ 2.26
PRKCD-202ENST00000394729 ZNF326Q5BKZ1 582 aaKnown RBP29.14■■■□□ 2.26
PRKCD-202ENST00000394729 KIF15Q9NS87 1388 aa29.14■■■□□ 2.25
PRKCD-202ENST00000394729 SAMD9LQ8IVG5 1584 aa29.12■■■□□ 2.25
PRKCD-202ENST00000394729 NUP155O75694 1391 aa29.12■■■□□ 2.25
PRKCD-202ENST00000394729 EFCAB2Q5VUJ9 269 aa29.1■■■□□ 2.25
PRKCD-202ENST00000394729 KDM5BQ9UGL1 1544 aa29.1■■■□□ 2.25
PRKCD-202ENST00000394729 L3MBTL2Q969R5 705 aa29.09■■■□□ 2.25
PRKCD-202ENST00000394729 MBD5Q9P267 1494 aa29.08■■■□□ 2.25
PRKCD-202ENST00000394729 DDX10Q13206 875 aaKnown RBP29.05■■■□□ 2.24
PRKCD-202ENST00000394729 PREX2Q70Z35 1606 aa29.04■■■□□ 2.24
PRKCD-202ENST00000394729 CCDC141Q6ZP82 1450 aa29.02■■■□□ 2.24
PRKCD-202ENST00000394729 ASXL2Q76L83 1435 aa29.01■■■□□ 2.23
PRKCD-202ENST00000394729 ARHGEF12Q9NZN5 1544 aa29.01■■■□□ 2.23
PRKCD-202ENST00000394729 UHRF1BP1LA0JNW5 1464 aa29.01■■■□□ 2.23
PRKCD-202ENST00000394729 PLCH2O75038 1416 aa28.98■■■□□ 2.23
PRKCD-202ENST00000394729 CROCC2H7BZ55 1655 aa28.97■■■□□ 2.23
PRKCD-202ENST00000394729 TRAPPC8Q9Y2L5 1435 aa28.97■■■□□ 2.23
PRKCD-202ENST00000394729 PZPP20742 1482 aa28.97■■■□□ 2.23
PRKCD-202ENST00000394729 WDR7Q9Y4E6 1490 aa28.97■■■□□ 2.23
PRKCD-202ENST00000394729 MYO5CQ9NQX4 1742 aa28.96■■■□□ 2.23
PRKCD-202ENST00000394729 ANKRD30BQ9BXX2 1392 aa28.96■■■□□ 2.23
PRKCD-202ENST00000394729 TIMELESSQ9UNS1 1208 aa28.95■■■□□ 2.22
PRKCD-202ENST00000394729 ADGBQ8N7X0 1667 aa28.95■■■□□ 2.22
PRKCD-202ENST00000394729 ADGRL2O95490 1459 aa28.94■■■□□ 2.22
PRKCD-202ENST00000394729 KDM2AQ9Y2K7 1162 aa28.94■■■□□ 2.22
PRKCD-202ENST00000394729 SPAG9O60271 1321 aaKnown RBP28.91■■■□□ 2.22
PRKCD-202ENST00000394729 RSPH4AQ5TD94 716 aa28.89■■■□□ 2.22
PRKCD-202ENST00000394729 NBPF8Q3BBV2 869 aa28.89■■■□□ 2.22
PRKCD-202ENST00000394729 RGL3Q3MIN7 710 aa28.89■■■□□ 2.21
PRKCD-202ENST00000394729 PLEKHH2Q8IVE3 1493 aa28.87■■■□□ 2.21
PRKCD-202ENST00000394729 SHANK2Q9UPX8 1470 aa28.86■■■□□ 2.21
PRKCD-202ENST00000394729 FANCAO15360 1455 aa28.85■■■□□ 2.21
PRKCD-202ENST00000394729 ARHGEF5Q12774 1597 aa28.83■■■□□ 2.21
PRKCD-202ENST00000394729 KIAA1107Q9UPP5 1409 aa28.82■■■□□ 2.2
PRKCD-202ENST00000394729 SCAPERQ9BY12 1400 aa28.81■■■□□ 2.2
PRKCD-202ENST00000394729 HSPA5P11021 654 aaKnown RBP28.8■■■□□ 2.2
PRKCD-202ENST00000394729 CNGB1Q14028 1251 aaPredicted RBP28.8■■■□□ 2.2
PRKCD-202ENST00000394729 POLR3GLQ9BT43 218 aa28.79■■■□□ 2.2
PRKCD-202ENST00000394729 RPRD2Q5VT52 1461 aaKnown RBP28.77■■■□□ 2.2
PRKCD-202ENST00000394729 RAPGEF3O95398 923 aa28.76■■■□□ 2.19
PRKCD-202ENST00000394729 KIF3BO15066 747 aa28.75■■■□□ 2.19
PRKCD-202ENST00000394729 ADGRL1O94910 1474 aa28.75■■■□□ 2.19
PRKCD-202ENST00000394729 DCAF11Q8TEB1 546 aa28.75■■■□□ 2.19
PRKCD-202ENST00000394729 ABCC1P33527 1531 aa28.74■■■□□ 2.19
PRKCD-202ENST00000394729 CD109Q6YHK3 1445 aa28.72■■■□□ 2.19
PRKCD-202ENST00000394729 EIF4G2P78344 907 aaKnown RBP eCLIP28.69■■■□□ 2.182e-6■■■■■ 35.1
PRKCD-202ENST00000394729 FAM135AQ9P2D6 1515 aa28.68■■■□□ 2.18
PRKCD-202ENST00000394729 TEX14Q8IWB6 1497 aa28.65■■■□□ 2.18
PRKCD-202ENST00000394729 C11orf95C9JLR9 678 aaPredicted RBP28.63■■■□□ 2.17
PRKCD-202ENST00000394729 FAM69CQ0P6D2 419 aa28.63■■■□□ 2.17
PRKCD-202ENST00000394729 GGT6Q6P531 493 aa28.63■■■□□ 2.17
PRKCD-202ENST00000394729 ABCA9Q8IUA7 1624 aa28.61■■■□□ 2.17
PRKCD-202ENST00000394729 ACIN1Q9UKV3 1341 aaKnown RBP28.61■■■□□ 2.17
PRKCD-202ENST00000394729 WASHC2AQ641Q2 1341 aa28.57■■■□□ 2.16
PRKCD-202ENST00000394729 CCDC144AA2RUR9 1427 aa28.57■■■□□ 2.16
PRKCD-202ENST00000394729 DUOX2Q9NRD8 1548 aa28.56■■■□□ 2.16
PRKCD-202ENST00000394729 CENPBP07199 599 aaPredicted RBP28.56■■■□□ 2.16
PRKCD-202ENST00000394729 SENP3Q9H4L4 574 aaPredicted RBP28.56■■■□□ 2.16
PRKCD-202ENST00000394729 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
PRKCD-202ENST00000394729 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
PRKCD-202ENST00000394729 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms