RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 MAPKBP1O60336 1514 aa22.15■■□□□ 1.14
CCT4-201ENST00000394440 CAMSAP2Q08AD1 1489 aa22.15■■□□□ 1.14
CCT4-201ENST00000394440 ZCCHC11Q5TAX3 1644 aaKnown RBP22.15■■□□□ 1.14
CCT4-201ENST00000394440 KDM5BQ9UGL1 1544 aa22.13■■□□□ 1.13
CCT4-201ENST00000394440 DAPK1P53355 1430 aa22.13■■□□□ 1.13
CCT4-201ENST00000394440 ABCC5O15440 1437 aa22.11■■□□□ 1.13
CCT4-201ENST00000394440 CROCC2H7BZ55 1655 aa22.1■■□□□ 1.13
CCT4-201ENST00000394440 ZNF644Q9H582 1327 aaPredicted RBP22.1■■□□□ 1.13
CCT4-201ENST00000394440 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
CCT4-201ENST00000394440 CFDP1Q9UEE9 299 aaPredicted RBP22.09■■□□□ 1.13
CCT4-201ENST00000394440 CDC42BPBQ9Y5S2 1711 aa22.08■■□□□ 1.13
CCT4-201ENST00000394440 ROCK1Q13464 1354 aa22.07■■□□□ 1.12
CCT4-201ENST00000394440 TTC37Q6PGP7 1564 aa22.06■■□□□ 1.12
CCT4-201ENST00000394440 ADGBQ8N7X0 1667 aa22.05■■□□□ 1.12
CCT4-201ENST00000394440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.05■■□□□ 1.123e-14■■■□□ 18.2
CCT4-201ENST00000394440 KDM6BO15054 1643 aa22.03■■□□□ 1.12
CCT4-201ENST00000394440 CHIC2Q9UKJ5 165 aa22.02■■□□□ 1.11
CCT4-201ENST00000394440 MYO5CQ9NQX4 1742 aa22.01■■□□□ 1.11
CCT4-201ENST00000394440 ADGRL2O95490 1459 aa22■■□□□ 1.11
CCT4-201ENST00000394440 SAMD9LQ8IVG5 1584 aa22■■□□□ 1.11
CCT4-201ENST00000394440 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
CCT4-201ENST00000394440 ARHGEF5Q12774 1597 aa21.98■■□□□ 1.11
CCT4-201ENST00000394440 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
CCT4-201ENST00000394440 SHANK2Q9UPX8 1470 aa21.97■■□□□ 1.11
CCT4-201ENST00000394440 ZNF777Q9ULD5 760 aaPredicted RBP21.95■■□□□ 1.1
CCT4-201ENST00000394440 MBD5Q9P267 1494 aa21.94■■□□□ 1.1
CCT4-201ENST00000394440 NCOA1Q15788 1441 aa21.93■■□□□ 1.1
CCT4-201ENST00000394440 ARHGAP5Q13017 1502 aa21.91■■□□□ 1.1
CCT4-201ENST00000394440 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
CCT4-201ENST00000394440 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.09
CCT4-201ENST00000394440 CCDC141Q6ZP82 1450 aa21.87■■□□□ 1.09
CCT4-201ENST00000394440 PLCH2O75038 1416 aa21.87■■□□□ 1.09
CCT4-201ENST00000394440 C9orf84Q5VXU9 1444 aa21.87■■□□□ 1.09
CCT4-201ENST00000394440 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
CCT4-201ENST00000394440 ARAP3Q8WWN8 1544 aa21.86■■□□□ 1.09
CCT4-201ENST00000394440 SYCP2Q9BX26 1530 aa21.86■■□□□ 1.09
CCT4-201ENST00000394440 ANKRD30AQ9BXX3 1397 aa21.85■■□□□ 1.09
CCT4-201ENST00000394440 MAST1Q9Y2H9 1570 aa21.84■■□□□ 1.09
CCT4-201ENST00000394440 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
CCT4-201ENST00000394440 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
CCT4-201ENST00000394440 PLEKHH2Q8IVE3 1493 aa21.84■■□□□ 1.09
CCT4-201ENST00000394440 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
CCT4-201ENST00000394440 HNRNPMP52272 730 aaKnown RBP eCLIP21.81■■□□□ 1.08
CCT4-201ENST00000394440 SIN3AQ96ST3 1273 aa21.81■■□□□ 1.08
CCT4-201ENST00000394440 RSPH4AQ5TD94 716 aa21.8■■□□□ 1.08
CCT4-201ENST00000394440 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
CCT4-201ENST00000394440 ABCC1P33527 1531 aa21.8■■□□□ 1.08
CCT4-201ENST00000394440 TIMELESSQ9UNS1 1208 aa21.79■■□□□ 1.08
CCT4-201ENST00000394440 ARHGEF12Q9NZN5 1544 aa21.78■■□□□ 1.08
CCT4-201ENST00000394440 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
CCT4-201ENST00000394440 ANKRD50Q9ULJ7 1429 aa21.77■■□□□ 1.08
CCT4-201ENST00000394440 TSPY4P0CV99 314 aa21.77■■□□□ 1.08
CCT4-201ENST00000394440 TSPY10P0CW01 314 aa21.77■■□□□ 1.08
CCT4-201ENST00000394440 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
CCT4-201ENST00000394440 PLXNC1O60486 1568 aa21.75■■□□□ 1.07
CCT4-201ENST00000394440 PZPP20742 1482 aa21.75■■□□□ 1.07
CCT4-201ENST00000394440 MPHOSPH9Q99550 1183 aa21.74■■□□□ 1.07
CCT4-201ENST00000394440 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
CCT4-201ENST00000394440 KIF15Q9NS87 1388 aa21.73■■□□□ 1.07
CCT4-201ENST00000394440 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
CCT4-201ENST00000394440 KDM5DQ9BY66 1539 aa21.71■■□□□ 1.07
CCT4-201ENST00000394440 NPM1P06748 294 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCT4-201ENST00000394440 FANCAO15360 1455 aa21.67■■□□□ 1.06
CCT4-201ENST00000394440 TRAPPC8Q9Y2L5 1435 aa21.66■■□□□ 1.06
CCT4-201ENST00000394440 ANKRD30BQ9BXX2 1392 aa21.65■■□□□ 1.06
CCT4-201ENST00000394440 TONSLQ96HA7 1378 aa21.64■■□□□ 1.05
CCT4-201ENST00000394440 UNC13BO14795 1591 aa21.63■■□□□ 1.05
CCT4-201ENST00000394440 SLC4A1APQ9BWU0 796 aaKnown RBP21.63■■□□□ 1.05
CCT4-201ENST00000394440 PPP1R15AO75807 674 aaPredicted RBP21.62■■□□□ 1.05
CCT4-201ENST00000394440 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
CCT4-201ENST00000394440 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
CCT4-201ENST00000394440 ZFYVE16Q7Z3T8 1539 aa21.61■■□□□ 1.05
CCT4-201ENST00000394440 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
CCT4-201ENST00000394440 DIEXFQ68CQ4 756 aaKnown RBP21.6■■□□□ 1.05
CCT4-201ENST00000394440 RTEL1-TNFRSF6BF6WH68 1400 aa21.6■■□□□ 1.05
CCT4-201ENST00000394440 INO80Q9ULG1 1556 aaPredicted RBP21.6■■□□□ 1.05
CCT4-201ENST00000394440 FOXD1Q16676 465 aa21.59■■□□□ 1.05
CCT4-201ENST00000394440 CFAP74Q9C0B2 1584 aa21.58■■□□□ 1.05
CCT4-201ENST00000394440 ADGRL1O94910 1474 aa21.58■■□□□ 1.05
CCT4-201ENST00000394440 ERBINQ96RT1 1412 aa21.57■■□□□ 1.04
CCT4-201ENST00000394440 NUP155O75694 1391 aa21.57■■□□□ 1.04
CCT4-201ENST00000394440 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
CCT4-201ENST00000394440 FAM135AQ9P2D6 1515 aa21.54■■□□□ 1.04
CCT4-201ENST00000394440 CD109Q6YHK3 1445 aa21.54■■□□□ 1.04
CCT4-201ENST00000394440 IQGAP3Q86VI3 1631 aa21.54■■□□□ 1.04
CCT4-201ENST00000394440 ATP7AQ04656 1500 aa21.53■■□□□ 1.04
CCT4-201ENST00000394440 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
CCT4-201ENST00000394440 TEX14Q8IWB6 1497 aa21.53■■□□□ 1.04
CCT4-201ENST00000394440 PKD2Q13563 968 aa21.51■■□□□ 1.03
CCT4-201ENST00000394440 AFAP1Q8N556 730 aa21.51■■□□□ 1.03
CCT4-201ENST00000394440 SPAG9O60271 1321 aaKnown RBP21.51■■□□□ 1.03
CCT4-201ENST00000394440 MAP3K4Q9Y6R4 1608 aa21.5■■□□□ 1.03
CCT4-201ENST00000394440 DIP2BQ9P265 1576 aa21.49■■□□□ 1.03
CCT4-201ENST00000394440 GLI2P10070 1586 aa21.48■■□□□ 1.03
CCT4-201ENST00000394440 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
CCT4-201ENST00000394440 KDM5CP41229 1560 aa21.47■■□□□ 1.03
CCT4-201ENST00000394440 DEPDC5O75140 1603 aa21.47■■□□□ 1.03
CCT4-201ENST00000394440 ZNF518AQ6AHZ1 1483 aa21.46■■□□□ 1.03
CCT4-201ENST00000394440 NEO1Q92859 1461 aa21.45■■□□□ 1.02
CCT4-201ENST00000394440 EIF2AK4Q9P2K8 1649 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms