RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RTL5Q5HYW3 569 aaPredicted RBP25.78■■□□□ 1.72
HOXC6-202ENST00000394331 GCC2Q8IWJ2 1684 aa25.78■■□□□ 1.72
HOXC6-202ENST00000394331 CHIC2Q9UKJ5 165 aa25.77■■□□□ 1.72
HOXC6-202ENST00000394331 PAK3O75914 559 aaPredicted RBP25.77■■□□□ 1.72
HOXC6-202ENST00000394331 HIRIP3Q9BW71 556 aaPredicted RBP25.76■■□□□ 1.71
HOXC6-202ENST00000394331 HNRNPUQ00839 825 aaKnown RBP eCLIP25.75■■□□□ 1.71
HOXC6-202ENST00000394331 IRX6P78412 446 aaPredicted RBP25.73■■□□□ 1.71
HOXC6-202ENST00000394331 KIAA0556O60303 1618 aa25.72■■□□□ 1.71
HOXC6-202ENST00000394331 DISP1Q96F81 1524 aa25.72■■□□□ 1.71
HOXC6-202ENST00000394331 IPO9Q96P70 1041 aaKnown RBP25.71■■□□□ 1.71
HOXC6-202ENST00000394331 WASHC2AQ641Q2 1341 aa25.71■■□□□ 1.71
HOXC6-202ENST00000394331 GRIN2AQ12879 1464 aa25.7■■□□□ 1.7
HOXC6-202ENST00000394331 ARID3CA6NKF2 412 aa25.69■■□□□ 1.7
HOXC6-202ENST00000394331 KDM5BQ9UGL1 1544 aa25.68■■□□□ 1.7
HOXC6-202ENST00000394331 ROCK1Q13464 1354 aa25.67■■□□□ 1.7
HOXC6-202ENST00000394331 C11orf95C9JLR9 678 aaPredicted RBP25.67■■□□□ 1.7
HOXC6-202ENST00000394331 IL27Q8NEV9 243 aa25.66■■□□□ 1.7
HOXC6-202ENST00000394331 MPHOSPH9Q99550 1183 aa25.65■■□□□ 1.7
HOXC6-202ENST00000394331 NUP153P49790 1475 aaKnown RBP25.65■■□□□ 1.7
HOXC6-202ENST00000394331 DENND4BO75064 1496 aaPredicted RBP25.65■■□□□ 1.7
HOXC6-202ENST00000394331 ANP32AP39687 249 aaKnown RBP25.65■■□□□ 1.7
HOXC6-202ENST00000394331 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
HOXC6-202ENST00000394331 DAPK1P53355 1430 aa25.63■■□□□ 1.69
HOXC6-202ENST00000394331 RAPGEF6Q8TEU7 1601 aa25.62■■□□□ 1.69
HOXC6-202ENST00000394331 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
HOXC6-202ENST00000394331 KDM6BO15054 1643 aa25.61■■□□□ 1.69
HOXC6-202ENST00000394331 USP35Q9P2H5 1018 aa25.61■■□□□ 1.69
HOXC6-202ENST00000394331 CCDC136Q96JN2 1154 aa25.59■■□□□ 1.69
HOXC6-202ENST00000394331 ABCC5O15440 1437 aa25.58■■□□□ 1.69
HOXC6-202ENST00000394331 B4GALNT3Q6L9W6 998 aa25.58■■□□□ 1.69
HOXC6-202ENST00000394331 ZBTB47Q9UFB7 747 aaPredicted RBP25.58■■□□□ 1.69
HOXC6-202ENST00000394331 DNMT1P26358 1616 aaKnown RBP25.57■■□□□ 1.68
HOXC6-202ENST00000394331 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
HOXC6-202ENST00000394331 WASHC2CQ9Y4E1 1318 aa25.56■■□□□ 1.68
HOXC6-202ENST00000394331 CHMP7Q8WUX9 453 aaPredicted RBP25.56■■□□□ 1.68
HOXC6-202ENST00000394331 TROQ12816 1431 aaPredicted RBP25.54■■□□□ 1.68
HOXC6-202ENST00000394331 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
HOXC6-202ENST00000394331 ZBED9Q6R2W3 1325 aa25.52■■□□□ 1.68
HOXC6-202ENST00000394331 EIF4G2P78344 907 aaKnown RBP eCLIP25.51■■□□□ 1.67
HOXC6-202ENST00000394331 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.67
HOXC6-202ENST00000394331 ZNF644Q9H582 1327 aaPredicted RBP25.5■■□□□ 1.67
HOXC6-202ENST00000394331 L3MBTL2Q969R5 705 aa25.5■■□□□ 1.67
HOXC6-202ENST00000394331 ANKRD30BQ9BXX2 1392 aa25.49■■□□□ 1.67
HOXC6-202ENST00000394331 CARMIL2Q6F5E8 1435 aa25.48■■□□□ 1.67
HOXC6-202ENST00000394331 PRG4Q92954 1404 aaPredicted RBP25.47■■□□□ 1.67
HOXC6-202ENST00000394331 CEP170Q5SW79 1584 aa25.47■■□□□ 1.67
HOXC6-202ENST00000394331 CFDP1Q9UEE9 299 aaPredicted RBP25.46■■□□□ 1.67
HOXC6-202ENST00000394331 RPRD2Q5VT52 1461 aaKnown RBP25.46■■□□□ 1.67
HOXC6-202ENST00000394331 FOXD1Q16676 465 aa25.44■■□□□ 1.66
HOXC6-202ENST00000394331 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
HOXC6-202ENST00000394331 PLB1Q6P1J6 1458 aa25.43■■□□□ 1.66
HOXC6-202ENST00000394331 NUP160Q12769 1436 aa25.43■■□□□ 1.66
HOXC6-202ENST00000394331 JPH4Q96JJ6 628 aa25.42■■□□□ 1.66
HOXC6-202ENST00000394331 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.42■■□□□ 1.66
HOXC6-202ENST00000394331 CAMSAP2Q08AD1 1489 aa25.42■■□□□ 1.66
HOXC6-202ENST00000394331 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
HOXC6-202ENST00000394331 GPATCH8Q9UKJ3 1502 aaKnown RBP25.41■■□□□ 1.66
HOXC6-202ENST00000394331 FBLN2P98095 1184 aa25.41■■□□□ 1.66
HOXC6-202ENST00000394331 RTN4Q9NQC3 1192 aaKnown RBP25.41■■□□□ 1.66
HOXC6-202ENST00000394331 RNF123Q5XPI4 1314 aa25.39■■□□□ 1.66
HOXC6-202ENST00000394331 ADCY10Q96PN6 1610 aa25.38■■□□□ 1.65
HOXC6-202ENST00000394331 NCOA1Q15788 1441 aa25.38■■□□□ 1.65
HOXC6-202ENST00000394331 SMG6Q86US8 1419 aaKnown RBP25.37■■□□□ 1.65
HOXC6-202ENST00000394331 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
HOXC6-202ENST00000394331 TEX14Q8IWB6 1497 aa25.37■■□□□ 1.65
HOXC6-202ENST00000394331 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
HOXC6-202ENST00000394331 PPM1GO15355 546 aaPredicted RBP25.33■■□□□ 1.64
HOXC6-202ENST00000394331 PLEKHD1A6NEE1 506 aa25.32■■□□□ 1.64
HOXC6-202ENST00000394331 PZPP20742 1482 aa25.32■■□□□ 1.64
HOXC6-202ENST00000394331 ANKRD30AQ9BXX3 1397 aa25.31■■□□□ 1.64
HOXC6-202ENST00000394331 ADGBQ8N7X0 1667 aa25.31■■□□□ 1.64
HOXC6-202ENST00000394331 ZNF777Q9ULD5 760 aaPredicted RBP25.31■■□□□ 1.64
HOXC6-202ENST00000394331 KIF14Q15058 1648 aa25.31■■□□□ 1.64
HOXC6-202ENST00000394331 NBPF8Q3BBV2 869 aa25.31■■□□□ 1.64
HOXC6-202ENST00000394331 CCDC7Q96M83 1385 aa25.3■■□□□ 1.64
HOXC6-202ENST00000394331 NEFMP07197 916 aa25.29■■□□□ 1.64
HOXC6-202ENST00000394331 ABCA8O94911 1581 aa25.27■■□□□ 1.64
HOXC6-202ENST00000394331 KIAA1107Q9UPP5 1409 aa25.27■■□□□ 1.64
HOXC6-202ENST00000394331 CROCC2H7BZ55 1655 aa25.25■■□□□ 1.63
HOXC6-202ENST00000394331 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
HOXC6-202ENST00000394331 ATP10BO94823 1461 aa25.22■■□□□ 1.63
HOXC6-202ENST00000394331 ANKRD50Q9ULJ7 1429 aa25.22■■□□□ 1.63
HOXC6-202ENST00000394331 PRKRIP1Q9H875 184 aaPredicted RBP25.22■■□□□ 1.63
HOXC6-202ENST00000394331 ABCC10Q5T3U5 1492 aa25.21■■□□□ 1.63
HOXC6-202ENST00000394331 SHANK2Q9UPX8 1470 aa25.21■■□□□ 1.63
HOXC6-202ENST00000394331 RSPH6AQ9H0K4 717 aa25.21■■□□□ 1.63
HOXC6-202ENST00000394331 CCDC184Q52MB2 194 aa25.19■■□□□ 1.62
HOXC6-202ENST00000394331 PKD2Q13563 968 aa25.19■■□□□ 1.62
HOXC6-202ENST00000394331 NUDCQ9Y266 331 aa25.16■■□□□ 1.62
HOXC6-202ENST00000394331 KIF7Q2M1P5 1343 aa25.16■■□□□ 1.62
HOXC6-202ENST00000394331 MBD5Q9P267 1494 aa25.16■■□□□ 1.62
HOXC6-202ENST00000394331 TCERG1O14776 1098 aaKnown RBP25.16■■□□□ 1.62
HOXC6-202ENST00000394331 GSE1Q14687 1217 aa25.16■■□□□ 1.62
HOXC6-202ENST00000394331 POLR1AO95602 1720 aaPredicted RBP25.16■■□□□ 1.62
HOXC6-202ENST00000394331 C9orf84Q5VXU9 1444 aa25.16■■□□□ 1.62
HOXC6-202ENST00000394331 TSPY4P0CV99 314 aa25.16■■□□□ 1.62
HOXC6-202ENST00000394331 TSPY10P0CW01 314 aa25.16■■□□□ 1.62
HOXC6-202ENST00000394331 MRS2Q9HD23 443 aa25.15■■□□□ 1.62
HOXC6-202ENST00000394331 CDC42BPAQ5VT25 1732 aa25.15■■□□□ 1.62
HOXC6-202ENST00000394331 FAM9BQ8IZU0 186 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms