RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
GAPVD1-206ENST00000394104 FOXD4L1Q9NU39 408 aa7.17□□□□□ -1.26
GAPVD1-206ENST00000394104 SLKQ9H2G2 1235 aaPredicted RBP7.17□□□□□ -1.26
GAPVD1-206ENST00000394104 ZCCHC6Q5VYS8 1495 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-206ENST00000394104 PLEKHD1A6NEE1 506 aa7.17□□□□□ -1.26
GAPVD1-206ENST00000394104 SRPK2P78362 688 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-206ENST00000394104 NOL8Q76FK4 1167 aaKnown RBP7.17□□□□□ -1.26
GAPVD1-206ENST00000394104 RASSF8Q8NHQ8 419 aa7.16□□□□□ -1.26
GAPVD1-206ENST00000394104 CHMP3Q9Y3E7 222 aa7.16□□□□□ -1.26
GAPVD1-206ENST00000394104 PTMSP20962 102 aa7.16□□□□□ -1.26
GAPVD1-206ENST00000394104 VPS53Q5VIR6 699 aa7.16□□□□□ -1.26
GAPVD1-206ENST00000394104 RSF1Q96T23 1441 aaPredicted RBP7.16□□□□□ -1.26
GAPVD1-206ENST00000394104 HTATSF1O43719 755 aaKnown RBP7.15□□□□□ -1.26
GAPVD1-206ENST00000394104 MORC1Q86VD1 984 aa7.15□□□□□ -1.26
GAPVD1-206ENST00000394104 ITPRIPQ8IWB1 547 aa7.15□□□□□ -1.26
GAPVD1-206ENST00000394104 SYAP1Q96A49 352 aaPredicted RBP7.15□□□□□ -1.26
GAPVD1-206ENST00000394104 SETQ01105 290 aaPredicted RBP7.15□□□□□ -1.26
GAPVD1-206ENST00000394104 WWC1Q8IX03 1113 aa7.15□□□□□ -1.26
GAPVD1-206ENST00000394104 SIN3AQ96ST3 1273 aa7.15□□□□□ -1.26
GAPVD1-206ENST00000394104 CLIP1P30622 1438 aa7.15□□□□□ -1.27
GAPVD1-206ENST00000394104 FOXD4L5Q5VV16 416 aaPredicted RBP7.15□□□□□ -1.27
GAPVD1-206ENST00000394104 FOXD4L4Q8WXT5 416 aaPredicted RBP7.15□□□□□ -1.27
GAPVD1-206ENST00000394104 TMX4Q9H1E5 349 aaPredicted RBP7.15□□□□□ -1.27
GAPVD1-206ENST00000394104 TRIM6-TRIM34B2RNG4 842 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 PAK3O75914 559 aaPredicted RBP7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 MFAP1P55081 439 aaKnown RBP7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 GORABQ5T7V8 394 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 CFAP44Q96MT7 982 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 CEP89Q96ST8 783 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 MLECQ14165 292 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 CFDP1Q9UEE9 299 aaPredicted RBP7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 TMF1P82094 1093 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 GOLGA6L3A6NEY3 463 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 G3V3G9 751 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 DCAF8Q5TAQ9 597 aa7.14□□□□□ -1.27
GAPVD1-206ENST00000394104 PES1O00541 588 aaKnown RBP7.13□□□□□ -1.27
GAPVD1-206ENST00000394104 TAF7LQ5H9L4 462 aa7.13□□□□□ -1.27
GAPVD1-206ENST00000394104 STK26Q9P289 416 aa7.13□□□□□ -1.27
GAPVD1-206ENST00000394104 RBM19Q9Y4C8 960 aaKnown RBP7.13□□□□□ -1.27
GAPVD1-206ENST00000394104 CSB-PGBD3P0DP91 1061 aa7.12□□□□□ -1.27
GAPVD1-206ENST00000394104 NACADO15069 1562 aa7.12□□□□□ -1.27
GAPVD1-206ENST00000394104 TPM3P06753 285 aa7.12□□□□□ -1.27
GAPVD1-206ENST00000394104 DCAF11Q8TEB1 546 aa7.12□□□□□ -1.27
GAPVD1-206ENST00000394104 MARCH6O60337 910 aa7.12□□□□□ -1.27
GAPVD1-206ENST00000394104 GPATCH3Q96I76 525 aa7.12□□□□□ -1.27
GAPVD1-206ENST00000394104 CCAR2Q8N163 923 aaKnown RBP7.11□□□□□ -1.27
GAPVD1-206ENST00000394104 CCDC9Q9Y3X0 531 aaKnown RBP7.11□□□□□ -1.27
GAPVD1-206ENST00000394104 TPD52L1Q16890 204 aaPredicted RBP7.11□□□□□ -1.27
GAPVD1-206ENST00000394104 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
GAPVD1-206ENST00000394104 CSPP1Q1MSJ5 1256 aa7.11□□□□□ -1.27
GAPVD1-206ENST00000394104 TOMM22Q9NS69 142 aa7.1□□□□□ -1.27
GAPVD1-206ENST00000394104 CALD1Q05682 793 aaKnown RBP7.1□□□□□ -1.27
GAPVD1-206ENST00000394104 KRI1Q8N9T8 703 aaKnown RBP7.1□□□□□ -1.27
GAPVD1-206ENST00000394104 USP35Q9P2H5 1018 aa7.1□□□□□ -1.27
GAPVD1-206ENST00000394104 RWDD1Q9H446 243 aaPredicted RBP7.09□□□□□ -1.27
GAPVD1-206ENST00000394104 CALRP27797 417 aaKnown RBP7.09□□□□□ -1.27
GAPVD1-206ENST00000394104 CCDC34Q96HJ3 373 aa7.09□□□□□ -1.27
GAPVD1-206ENST00000394104 SLC4A10Q6U841 1118 aa7.09□□□□□ -1.28
GAPVD1-206ENST00000394104 SF3A1Q15459 793 aaKnown RBP7.08□□□□□ -1.28
GAPVD1-206ENST00000394104 HDGFL2Q7Z4V5 671 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-206ENST00000394104 TRHP20396 242 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-206ENST00000394104 FOXD4L6Q3SYB3 417 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-206ENST00000394104 FOXD4L3Q6VB84 417 aaPredicted RBP7.08□□□□□ -1.28
GAPVD1-206ENST00000394104 KANK1Q14678 1352 aa7.08□□□□□ -1.28
GAPVD1-206ENST00000394104 ZNF771Q7L3S4 317 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 FRAT2O75474 233 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 PHF14O94880 888 aa7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 H3BQV1 296 aa7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 U2AF1L5P0DN76 240 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 U2AF1Q01081 240 aaKnown RBP eCLIP7.07□□□□□ -1.282e-9■□□□□ 11.3
GAPVD1-206ENST00000394104 TSR1Q2NL82 804 aaKnown RBP7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 IFFO2Q5TF58 517 aa7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 PMFBP1Q8TBY8 1022 aa7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 RCAN3Q9UKA8 241 aa7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 HSP90AA2PQ14568 343 aaPredicted RBP7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 ZNF592Q92610 1267 aa7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 KIF16BQ96L93 1317 aa7.07□□□□□ -1.28
GAPVD1-206ENST00000394104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 KTN1Q86UP2 1357 aaKnown RBP7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 GOLGA3Q08378 1498 aa7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 CEP162Q5TB80 1403 aa7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 TPM2P07951 284 aa7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 HDGFP51858 240 aaKnown RBP7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 SMC4Q9NTJ3 1288 aa7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 ERCC6Q03468 1493 aa7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 RAD21O60216 631 aa7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 PCMTD1Q96MG8 357 aaPredicted RBP7.06□□□□□ -1.28
GAPVD1-206ENST00000394104 CCDC146Q8IYE0 955 aa7.05□□□□□ -1.28
GAPVD1-206ENST00000394104 STK31Q9BXU1 1019 aa7.05□□□□□ -1.28
GAPVD1-206ENST00000394104 SPAG9O60271 1321 aaKnown RBP7.05□□□□□ -1.28
GAPVD1-206ENST00000394104 EIF4G1Q04637 1599 aaKnown RBP7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 CCDC70Q6NSX1 233 aa7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 GOLGA6L19H0YKK7 550 aa7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 HSPA5P11021 654 aaKnown RBP7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 CNKSR2Q8WXI2 1034 aa7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 TCEAL9Q9UHQ7 104 aa7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 TCERG1O14776 1098 aaKnown RBP7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 RILPL2Q969X0 211 aa7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 BCL11BQ9C0K0 894 aaPredicted RBP7.04□□□□□ -1.28
GAPVD1-206ENST00000394104 FAM184AQ8NB25 1140 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms