RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 SMG6Q86US8 1419 aaKnown RBP11.19□□□□□ -0.62
GABRA1-202ENST00000393943 NLRP13Q86W25 1043 aa11.19□□□□□ -0.62
GABRA1-202ENST00000393943 CFTRP13569 1480 aa11.19□□□□□ -0.62
GABRA1-202ENST00000393943 MYBBP1AQ9BQG0 1328 aaKnown RBP11.19□□□□□ -0.62
GABRA1-202ENST00000393943 MAPKBP1O60336 1514 aa11.18□□□□□ -0.62
GABRA1-202ENST00000393943 WASHC2AQ641Q2 1341 aa11.17□□□□□ -0.62
GABRA1-202ENST00000393943 RSPH6AQ9H0K4 717 aa11.17□□□□□ -0.62
GABRA1-202ENST00000393943 KDM2AQ9Y2K7 1162 aa11.17□□□□□ -0.62
GABRA1-202ENST00000393943 EHBP1L1Q8N3D4 1523 aa11.16□□□□□ -0.62
GABRA1-202ENST00000393943 ARID3CA6NKF2 412 aa11.16□□□□□ -0.62
GABRA1-202ENST00000393943 PDE4AP27815 886 aa11.16□□□□□ -0.62
GABRA1-202ENST00000393943 RRP1P56182 461 aaKnown RBP11.16□□□□□ -0.62
GABRA1-202ENST00000393943 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
GABRA1-202ENST00000393943 ANKRD30AQ9BXX3 1397 aa11.15□□□□□ -0.62
GABRA1-202ENST00000393943 HSP90AA1P07900 732 aaKnown RBP11.15□□□□□ -0.62
GABRA1-202ENST00000393943 TRIM44Q96DX7 344 aaPredicted RBP11.15□□□□□ -0.62
GABRA1-202ENST00000393943 GSE1Q14687 1217 aa11.15□□□□□ -0.63
GABRA1-202ENST00000393943 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
GABRA1-202ENST00000393943 TMF1P82094 1093 aa11.14□□□□□ -0.63
GABRA1-202ENST00000393943 PTMSP20962 102 aa11.14□□□□□ -0.63
GABRA1-202ENST00000393943 MIA2Q96PC5 1412 aa11.14□□□□□ -0.63
GABRA1-202ENST00000393943 PLEKHD1A6NEE1 506 aa11.13□□□□□ -0.63
GABRA1-202ENST00000393943 BRD4O60885 1362 aaPredicted RBP11.13□□□□□ -0.63
GABRA1-202ENST00000393943 GOLGA6L22H0YM25 854 aa11.13□□□□□ -0.63
GABRA1-202ENST00000393943 MSH5O43196 834 aa11.13□□□□□ -0.63
GABRA1-202ENST00000393943 CENPQQ7L2Z9 268 aaPredicted RBP11.13□□□□□ -0.63
GABRA1-202ENST00000393943 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
GABRA1-202ENST00000393943 USP47Q96K76 1375 aa11.12□□□□□ -0.63
GABRA1-202ENST00000393943 KIF7Q2M1P5 1343 aa11.11□□□□□ -0.63
GABRA1-202ENST00000393943 SUPT6HQ7KZ85 1726 aaKnown RBP11.11□□□□□ -0.63
GABRA1-202ENST00000393943 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
GABRA1-202ENST00000393943 PKD2Q13563 968 aa11.1□□□□□ -0.63
GABRA1-202ENST00000393943 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
GABRA1-202ENST00000393943 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
GABRA1-202ENST00000393943 PCF11O94913 1555 aaKnown RBP11.09□□□□□ -0.63
GABRA1-202ENST00000393943 NAIPQ13075 1403 aa11.08□□□□□ -0.64
GABRA1-202ENST00000393943 FANCD2Q9BXW9 1451 aa11.08□□□□□ -0.64
GABRA1-202ENST00000393943 EIF3AQ14152 1382 aaKnown RBP11.08□□□□□ -0.64
GABRA1-202ENST00000393943 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
GABRA1-202ENST00000393943 PDS5BQ9NTI5 1447 aa11.07□□□□□ -0.64
GABRA1-202ENST00000393943 RGS3P49796 1198 aa11.07□□□□□ -0.64
GABRA1-202ENST00000393943 WASHC2CQ9Y4E1 1318 aa11.07□□□□□ -0.64
GABRA1-202ENST00000393943 DCAF11Q8TEB1 546 aa11.06□□□□□ -0.64
GABRA1-202ENST00000393943 MAPK8IP3Q9UPT6 1336 aa11.06□□□□□ -0.64
GABRA1-202ENST00000393943 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
GABRA1-202ENST00000393943 CFAP43Q8NDM7 1665 aa11.06□□□□□ -0.64
GABRA1-202ENST00000393943 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
GABRA1-202ENST00000393943 NAP1L5Q96NT1 182 aaPredicted RBP11.06□□□□□ -0.64
GABRA1-202ENST00000393943 CUL7Q14999 1698 aa11.06□□□□□ -0.64
GABRA1-202ENST00000393943 NCOA1Q15788 1441 aa11.06□□□□□ -0.64
GABRA1-202ENST00000393943 PTPN23Q9H3S7 1636 aa11.05□□□□□ -0.64
GABRA1-202ENST00000393943 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
GABRA1-202ENST00000393943 AAMPQ13685 434 aa11.05□□□□□ -0.64
GABRA1-202ENST00000393943 BICRAQ9NZM4 1560 aa11.05□□□□□ -0.64
GABRA1-202ENST00000393943 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
GABRA1-202ENST00000393943 ROCK1Q13464 1354 aa11.04□□□□□ -0.64
GABRA1-202ENST00000393943 EXOC6Q8TAG9 804 aa11.04□□□□□ -0.64
GABRA1-202ENST00000393943 GOLGA2Q08379 1002 aa11.04□□□□□ -0.64
GABRA1-202ENST00000393943 PMFBP1Q8TBY8 1022 aa11.04□□□□□ -0.64
GABRA1-202ENST00000393943 NUP155O75694 1391 aa11.04□□□□□ -0.64
GABRA1-202ENST00000393943 FOXD1Q16676 465 aa11.03□□□□□ -0.64
GABRA1-202ENST00000393943 CC2D2AQ9P2K1 1620 aa11.03□□□□□ -0.64
GABRA1-202ENST00000393943 FBLN2P98095 1184 aa11.03□□□□□ -0.64
GABRA1-202ENST00000393943 PNNQ9H307 717 aaKnown RBP11.03□□□□□ -0.64
GABRA1-202ENST00000393943 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
GABRA1-202ENST00000393943 UNC13AQ9UPW8 1703 aa11.02□□□□□ -0.64
GABRA1-202ENST00000393943 CC2D1BQ5T0F9 858 aaKnown RBP11.02□□□□□ -0.65
GABRA1-202ENST00000393943 BACH2Q9BYV9 841 aa11.02□□□□□ -0.65
GABRA1-202ENST00000393943 HSCBQ8IWL3 235 aa11.02□□□□□ -0.65
GABRA1-202ENST00000393943 CARMIL2Q6F5E8 1435 aa11.01□□□□□ -0.65
GABRA1-202ENST00000393943 GOLGA6L3A6NEY3 463 aa11.01□□□□□ -0.65
GABRA1-202ENST00000393943 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
GABRA1-202ENST00000393943 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
GABRA1-202ENST00000393943 MYH16Q9H6N6 1097 aa11.01□□□□□ -0.65
GABRA1-202ENST00000393943 CGNL1Q0VF96 1302 aa11.01□□□□□ -0.65
GABRA1-202ENST00000393943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11□□□□□ -0.65
GABRA1-202ENST00000393943 PLEKHH2Q8IVE3 1493 aa11□□□□□ -0.65
GABRA1-202ENST00000393943 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
GABRA1-202ENST00000393943 RWDD1Q9H446 243 aaPredicted RBP11□□□□□ -0.65
GABRA1-202ENST00000393943 PNISRQ8TF01 805 aaKnown RBP10.99□□□□□ -0.65
GABRA1-202ENST00000393943 GAPVD1Q14C86 1478 aa10.99□□□□□ -0.65
GABRA1-202ENST00000393943 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
GABRA1-202ENST00000393943 RGL3Q3MIN7 710 aa10.99□□□□□ -0.65
GABRA1-202ENST00000393943 NFKBIBQ15653 356 aa10.99□□□□□ -0.65
GABRA1-202ENST00000393943 ABCA10Q8WWZ4 1543 aa10.98□□□□□ -0.65
GABRA1-202ENST00000393943 TDRD9Q8NDG6 1382 aaKnown RBP10.98□□□□□ -0.65
GABRA1-202ENST00000393943 FAM43AQ8N2R8 423 aa10.98□□□□□ -0.65
GABRA1-202ENST00000393943 DNMBPQ6XZF7 1577 aa10.97□□□□□ -0.65
GABRA1-202ENST00000393943 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
GABRA1-202ENST00000393943 KIAA1107Q9UPP5 1409 aa10.97□□□□□ -0.65
GABRA1-202ENST00000393943 DDX11L8A8MPP1 907 aa10.97□□□□□ -0.65
GABRA1-202ENST00000393943 STAC3Q96MF2 364 aa10.97□□□□□ -0.65
GABRA1-202ENST00000393943 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
GABRA1-202ENST00000393943 RPRD2Q5VT52 1461 aaKnown RBP10.97□□□□□ -0.65
GABRA1-202ENST00000393943 CCDC144AA2RUR9 1427 aa10.96□□□□□ -0.66
GABRA1-202ENST00000393943 TNNT2P45379 298 aaPredicted RBP10.96□□□□□ -0.66
GABRA1-202ENST00000393943 NINLQ9Y2I6 1382 aa10.96□□□□□ -0.66
GABRA1-202ENST00000393943 ARXQ96QS3 562 aa10.96□□□□□ -0.66
GABRA1-202ENST00000393943 E9PSI1 815 aa10.95□□□□□ -0.66
GABRA1-202ENST00000393943 ANKRD30BQ9BXX2 1392 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms