RNA–Protein interactions for RNA: ENST00000393883.6

ZNF559-202, Transcript of zinc finger protein 559, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF559, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-202ENST00000393883 NUP155O75694 1391 aa18.8■□□□□ 0.6
ZNF559-202ENST00000393883 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
ZNF559-202ENST00000393883 CC2D1BQ5T0F9 858 aaKnown RBP18.79■□□□□ 0.6
ZNF559-202ENST00000393883 STK26Q9P289 416 aa18.79■□□□□ 0.6
ZNF559-202ENST00000393883 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
ZNF559-202ENST00000393883 TMX4Q9H1E5 349 aaPredicted RBP18.78■□□□□ 0.6
ZNF559-202ENST00000393883 PAK3O75914 559 aaPredicted RBP18.77■□□□□ 0.6
ZNF559-202ENST00000393883 SIN3AQ96ST3 1273 aa18.77■□□□□ 0.6
ZNF559-202ENST00000393883 MIER1Q8N108 512 aa18.77■□□□□ 0.59
ZNF559-202ENST00000393883 SAFB2Q14151 953 aaKnown RBP eCLIP18.76■□□□□ 0.59
ZNF559-202ENST00000393883 SOX12O15370 315 aa18.75■□□□□ 0.59
ZNF559-202ENST00000393883 TERF2IPQ9NYB0 399 aa18.75■□□□□ 0.59
ZNF559-202ENST00000393883 ATAD2BQ9ULI0 1458 aa18.74■□□□□ 0.59
ZNF559-202ENST00000393883 HDAC5Q9UQL6 1122 aa18.74■□□□□ 0.59
ZNF559-202ENST00000393883 FGD1P98174 961 aa18.74■□□□□ 0.59
ZNF559-202ENST00000393883 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
ZNF559-202ENST00000393883 KCNJ4P48050 445 aa18.71■□□□□ 0.59
ZNF559-202ENST00000393883 PTPRGP23470 1445 aa18.71■□□□□ 0.59
ZNF559-202ENST00000393883 KTN1Q86UP2 1357 aaKnown RBP18.7■□□□□ 0.58
ZNF559-202ENST00000393883 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
ZNF559-202ENST00000393883 CCDC9Q9Y3X0 531 aaKnown RBP18.7■□□□□ 0.58
ZNF559-202ENST00000393883 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
ZNF559-202ENST00000393883 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
ZNF559-202ENST00000393883 GLIPR1L2Q4G1C9 344 aa18.68■□□□□ 0.58
ZNF559-202ENST00000393883 UACAQ9BZF9 1416 aa18.67■□□□□ 0.58
ZNF559-202ENST00000393883 NGDNQ8NEJ9 315 aaKnown RBP18.67■□□□□ 0.58
ZNF559-202ENST00000393883 MPHOSPH9Q99550 1183 aa18.67■□□□□ 0.58
ZNF559-202ENST00000393883 IRX6P78412 446 aaPredicted RBP18.66■□□□□ 0.58
ZNF559-202ENST00000393883 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.58
ZNF559-202ENST00000393883 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
ZNF559-202ENST00000393883 MCCP23508 829 aa18.64■□□□□ 0.57
ZNF559-202ENST00000393883 RALBP1Q15311 655 aa18.63■□□□□ 0.57
ZNF559-202ENST00000393883 LMOD3Q0VAK6 560 aa18.61■□□□□ 0.57
ZNF559-202ENST00000393883 NBR1Q14596 966 aa18.59■□□□□ 0.57
ZNF559-202ENST00000393883 VGFO15240 615 aaPredicted RBP18.59■□□□□ 0.57
ZNF559-202ENST00000393883 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
ZNF559-202ENST00000393883 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
ZNF559-202ENST00000393883 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
ZNF559-202ENST00000393883 STK31Q9BXU1 1019 aa18.59■□□□□ 0.57
ZNF559-202ENST00000393883 FHOD3Q2V2M9 1422 aa18.58■□□□□ 0.56
ZNF559-202ENST00000393883 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
ZNF559-202ENST00000393883 HSPA5P11021 654 aaKnown RBP18.57■□□□□ 0.56
ZNF559-202ENST00000393883 PPP4R2Q9NY27 417 aa18.57■□□□□ 0.56
ZNF559-202ENST00000393883 TRIM44Q96DX7 344 aaPredicted RBP18.56■□□□□ 0.56
ZNF559-202ENST00000393883 AMPHP49418 695 aa18.55■□□□□ 0.56
ZNF559-202ENST00000393883 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
ZNF559-202ENST00000393883 GOLGA6L6A8MZA4 724 aa18.55■□□□□ 0.56
ZNF559-202ENST00000393883 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
ZNF559-202ENST00000393883 NAP1L2Q9ULW6 460 aaPredicted RBP18.54■□□□□ 0.56
ZNF559-202ENST00000393883 NRDCO43847 1150 aa18.54■□□□□ 0.56
ZNF559-202ENST00000393883 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
ZNF559-202ENST00000393883 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
ZNF559-202ENST00000393883 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.52■□□□□ 0.56
ZNF559-202ENST00000393883 RGS3P49796 1198 aa18.51■□□□□ 0.55
ZNF559-202ENST00000393883 KIAA1211Q6ZU35 1233 aa18.5■□□□□ 0.55
ZNF559-202ENST00000393883 ISY1Q9ULR0 285 aaKnown RBP18.5■□□□□ 0.55
ZNF559-202ENST00000393883 WIZO95785 1651 aa18.5■□□□□ 0.55
ZNF559-202ENST00000393883 HSP90AB1P08238 724 aaKnown RBP18.5■□□□□ 0.55
ZNF559-202ENST00000393883 PTMAP06454 111 aaKnown RBP18.5■□□□□ 0.55
ZNF559-202ENST00000393883 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
ZNF559-202ENST00000393883 GOLGA6L4A6NEF3 574 aa18.49■□□□□ 0.55
ZNF559-202ENST00000393883 RAB3GAP2Q9H2M9 1393 aa18.49■□□□□ 0.55
ZNF559-202ENST00000393883 TAF7LQ5H9L4 462 aa18.49■□□□□ 0.55
ZNF559-202ENST00000393883 TULP1O00294 542 aaPredicted RBP18.48■□□□□ 0.55
ZNF559-202ENST00000393883 GAPVD1Q14C86 1478 aa18.48■□□□□ 0.55
ZNF559-202ENST00000393883 G3V3G9 751 aa18.48■□□□□ 0.55
ZNF559-202ENST00000393883 DCAF8Q5TAQ9 597 aa18.48■□□□□ 0.55
ZNF559-202ENST00000393883 GPATCH3Q96I76 525 aa18.48■□□□□ 0.55
ZNF559-202ENST00000393883 HMMRO75330 724 aa18.47■□□□□ 0.55
ZNF559-202ENST00000393883 GORABQ5T7V8 394 aa18.47■□□□□ 0.55
ZNF559-202ENST00000393883 FAM69CQ0P6D2 419 aa18.47■□□□□ 0.55
ZNF559-202ENST00000393883 FOXD1Q16676 465 aa18.47■□□□□ 0.55
ZNF559-202ENST00000393883 STAC3Q96MF2 364 aa18.46■□□□□ 0.55
ZNF559-202ENST00000393883 PHLDB1Q86UU1 1377 aa18.44■□□□□ 0.54
ZNF559-202ENST00000393883 GTF2E1P29083 439 aaPredicted RBP18.44■□□□□ 0.54
ZNF559-202ENST00000393883 EVC2Q86UK5 1308 aa18.44■□□□□ 0.54
ZNF559-202ENST00000393883 HSCBQ8IWL3 235 aa18.43■□□□□ 0.54
ZNF559-202ENST00000393883 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
ZNF559-202ENST00000393883 EVA1CP58658 441 aa18.43■□□□□ 0.54
ZNF559-202ENST00000393883 RWDD1Q9H446 243 aaPredicted RBP18.43■□□□□ 0.54
ZNF559-202ENST00000393883 GNL2Q13823 731 aaKnown RBP18.41■□□□□ 0.54
ZNF559-202ENST00000393883 COG3Q96JB2 828 aa18.41■□□□□ 0.54
ZNF559-202ENST00000393883 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.53
ZNF559-202ENST00000393883 C1orf141Q5JVX7 400 aa18.39■□□□□ 0.53
ZNF559-202ENST00000393883 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
ZNF559-202ENST00000393883 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
ZNF559-202ENST00000393883 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
ZNF559-202ENST00000393883 HTATSF1O43719 755 aaKnown RBP18.38■□□□□ 0.53
ZNF559-202ENST00000393883 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
ZNF559-202ENST00000393883 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
ZNF559-202ENST00000393883 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
ZNF559-202ENST00000393883 ITPRIPQ8IWB1 547 aa18.36■□□□□ 0.53
ZNF559-202ENST00000393883 CGNL1Q0VF96 1302 aa18.35■□□□□ 0.53
ZNF559-202ENST00000393883 FGD5Q6ZNL6 1462 aa18.35■□□□□ 0.53
ZNF559-202ENST00000393883 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
ZNF559-202ENST00000393883 CCDC34Q96HJ3 373 aa18.35■□□□□ 0.53
ZNF559-202ENST00000393883 L1TD1Q5T7N2 865 aaKnown RBP18.35■□□□□ 0.53
ZNF559-202ENST00000393883 ERICH6BQ5W0A0 696 aa18.35■□□□□ 0.53
ZNF559-202ENST00000393883 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
ZNF559-202ENST00000393883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.537e-6■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms