RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 PTMAP06454 111 aaKnown RBP9.18□□□□□ -0.94
DDX60-201ENST00000393743 SENP3Q9H4L4 574 aaPredicted RBP9.18□□□□□ -0.94
DDX60-201ENST00000393743 PPP4R2Q9NY27 417 aa9.18□□□□□ -0.94
DDX60-201ENST00000393743 TERF2IPQ9NYB0 399 aa9.18□□□□□ -0.94
DDX60-201ENST00000393743 KTN1Q86UP2 1357 aaKnown RBP9.17□□□□□ -0.94
DDX60-201ENST00000393743 SMARCA4P51532 1647 aa9.17□□□□□ -0.94
DDX60-201ENST00000393743 HIRIP3Q9BW71 556 aaPredicted RBP9.17□□□□□ -0.94
DDX60-201ENST00000393743 CCER2I3L3R5 266 aa9.17□□□□□ -0.94
DDX60-201ENST00000393743 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
DDX60-201ENST00000393743 RALBP1Q15311 655 aa9.16□□□□□ -0.94
DDX60-201ENST00000393743 FRAT1Q92837 279 aaPredicted RBP9.16□□□□□ -0.94
DDX60-201ENST00000393743 SPAG9O60271 1321 aaKnown RBP9.16□□□□□ -0.94
DDX60-201ENST00000393743 CCDC18Q5T9S5 1454 aa9.16□□□□□ -0.94
DDX60-201ENST00000393743 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
DDX60-201ENST00000393743 LMOD3Q0VAK6 560 aa9.16□□□□□ -0.94
DDX60-201ENST00000393743 PKD2Q13563 968 aa9.16□□□□□ -0.94
DDX60-201ENST00000393743 GOLGA6L4A6NEF3 574 aa9.15□□□□□ -0.94
DDX60-201ENST00000393743 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.95
DDX60-201ENST00000393743 UACAQ9BZF9 1416 aa9.15□□□□□ -0.95
DDX60-201ENST00000393743 PTMSP20962 102 aa9.14□□□□□ -0.95
DDX60-201ENST00000393743 NUP155O75694 1391 aa9.14□□□□□ -0.95
DDX60-201ENST00000393743 HSP90AB1P08238 724 aaKnown RBP9.14□□□□□ -0.95
DDX60-201ENST00000393743 ERICH6BQ5W0A0 696 aa9.14□□□□□ -0.95
DDX60-201ENST00000393743 TNNT2P45379 298 aaPredicted RBP9.13□□□□□ -0.95
DDX60-201ENST00000393743 HTATSF1O43719 755 aaKnown RBP9.13□□□□□ -0.95
DDX60-201ENST00000393743 WIZO95785 1651 aa9.13□□□□□ -0.95
DDX60-201ENST00000393743 ROCK2O75116 1388 aaKnown RBP9.13□□□□□ -0.95
DDX60-201ENST00000393743 KIAA1211Q6ZU35 1233 aa9.12□□□□□ -0.95
DDX60-201ENST00000393743 CCDC34Q96HJ3 373 aa9.12□□□□□ -0.95
DDX60-201ENST00000393743 STK31Q9BXU1 1019 aa9.12□□□□□ -0.95
DDX60-201ENST00000393743 HSCBQ8IWL3 235 aa9.12□□□□□ -0.95
DDX60-201ENST00000393743 NBR1Q14596 966 aa9.11□□□□□ -0.95
DDX60-201ENST00000393743 RAPGEF2Q9Y4G8 1499 aa9.11□□□□□ -0.95
DDX60-201ENST00000393743 KIF3BO15066 747 aa9.11□□□□□ -0.95
DDX60-201ENST00000393743 GPATCH3Q96I76 525 aa9.11□□□□□ -0.95
DDX60-201ENST00000393743 WASHC2CQ9Y4E1 1318 aa9.11□□□□□ -0.95
DDX60-201ENST00000393743 TDRD9Q8NDG6 1382 aaKnown RBP9.11□□□□□ -0.95
DDX60-201ENST00000393743 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
DDX60-201ENST00000393743 SIN3AQ96ST3 1273 aa9.11□□□□□ -0.95
DDX60-201ENST00000393743 HMMRO75330 724 aa9.1□□□□□ -0.95
DDX60-201ENST00000393743 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
DDX60-201ENST00000393743 IRX6P78412 446 aaPredicted RBP9.1□□□□□ -0.95
DDX60-201ENST00000393743 CHMP4CQ96CF2 233 aa9.1□□□□□ -0.95
DDX60-201ENST00000393743 PHLDB1Q86UU1 1377 aa9.1□□□□□ -0.95
DDX60-201ENST00000393743 STK26Q9P289 416 aa9.1□□□□□ -0.95
DDX60-201ENST00000393743 NAP1L2Q9ULW6 460 aaPredicted RBP9.09□□□□□ -0.95
DDX60-201ENST00000393743 RWDD1Q9H446 243 aaPredicted RBP9.09□□□□□ -0.95
DDX60-201ENST00000393743 CHAF1AQ13111 956 aaPredicted RBP9.09□□□□□ -0.95
DDX60-201ENST00000393743 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
DDX60-201ENST00000393743 MPHOSPH9Q99550 1183 aa9.09□□□□□ -0.95
DDX60-201ENST00000393743 SUPT16HQ9Y5B9 1047 aaKnown RBP9.09□□□□□ -0.95
DDX60-201ENST00000393743 JPH4Q96JJ6 628 aa9.08□□□□□ -0.96
DDX60-201ENST00000393743 NGDNQ8NEJ9 315 aaKnown RBP9.08□□□□□ -0.96
DDX60-201ENST00000393743 U2AF1L5P0DN76 240 aaPredicted RBP9.08□□□□□ -0.96
DDX60-201ENST00000393743 U2AF1Q01081 240 aaKnown RBP eCLIP9.08□□□□□ -0.96
DDX60-201ENST00000393743 DNTTIP2Q5QJE6 756 aaKnown RBP9.08□□□□□ -0.96
DDX60-201ENST00000393743 RGS3P49796 1198 aa9.08□□□□□ -0.96
DDX60-201ENST00000393743 GNL2Q13823 731 aaKnown RBP9.08□□□□□ -0.96
DDX60-201ENST00000393743 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
DDX60-201ENST00000393743 SOX12O15370 315 aa9.07□□□□□ -0.96
DDX60-201ENST00000393743 SAFB2Q14151 953 aaKnown RBP eCLIP9.06□□□□□ -0.96
DDX60-201ENST00000393743 CCDC9Q9Y3X0 531 aaKnown RBP9.06□□□□□ -0.96
DDX60-201ENST00000393743 PDE3BQ13370 1112 aa9.06□□□□□ -0.96
DDX60-201ENST00000393743 HSPA5P11021 654 aaKnown RBP9.06□□□□□ -0.96
DDX60-201ENST00000393743 GORABQ5T7V8 394 aa9.06□□□□□ -0.96
DDX60-201ENST00000393743 PMFBP1Q8TBY8 1022 aa9.06□□□□□ -0.96
DDX60-201ENST00000393743 OSCARQ8IYS5 282 aa9.06□□□□□ -0.96
DDX60-201ENST00000393743 TAF7LQ5H9L4 462 aa9.05□□□□□ -0.96
DDX60-201ENST00000393743 ISY1Q9ULR0 285 aaKnown RBP9.05□□□□□ -0.96
DDX60-201ENST00000393743 KIAA2012Q0VF49 1180 aa9.05□□□□□ -0.96
DDX60-201ENST00000393743 PTPRGP23470 1445 aa9.05□□□□□ -0.96
DDX60-201ENST00000393743 AMPHP49418 695 aa9.04□□□□□ -0.96
DDX60-201ENST00000393743 KIF3AQ9Y496 699 aa9.04□□□□□ -0.96
DDX60-201ENST00000393743 G3V3G9 751 aa9.04□□□□□ -0.96
DDX60-201ENST00000393743 DCAF8Q5TAQ9 597 aa9.04□□□□□ -0.96
DDX60-201ENST00000393743 NGEFQ8N5V2 710 aa9.04□□□□□ -0.96
DDX60-201ENST00000393743 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.04□□□□□ -0.96
DDX60-201ENST00000393743 TULP1O00294 542 aaPredicted RBP9.04□□□□□ -0.96
DDX60-201ENST00000393743 ANO8Q9HCE9 1232 aaPredicted RBP9.03□□□□□ -0.96
DDX60-201ENST00000393743 CSPP1Q1MSJ5 1256 aa9.03□□□□□ -0.96
DDX60-201ENST00000393743 LRRFIP1Q32MZ4 808 aaKnown RBP9.02□□□□□ -0.96
DDX60-201ENST00000393743 NLRP13Q86W25 1043 aa9.02□□□□□ -0.97
DDX60-201ENST00000393743 SYAP1Q96A49 352 aaPredicted RBP9.02□□□□□ -0.97
DDX60-201ENST00000393743 TPM4P67936 248 aa9.02□□□□□ -0.97
DDX60-201ENST00000393743 GBP4Q96PP9 640 aa9.02□□□□□ -0.97
DDX60-201ENST00000393743 CCDC144AA2RUR9 1427 aa9.01□□□□□ -0.97
DDX60-201ENST00000393743 GTF2E1P29083 439 aaPredicted RBP9.01□□□□□ -0.97
DDX60-201ENST00000393743 PLCB2Q00722 1185 aa9.01□□□□□ -0.97
DDX60-201ENST00000393743 CLSTN1O94985 981 aa9□□□□□ -0.97
DDX60-201ENST00000393743 EVC2Q86UK5 1308 aa9□□□□□ -0.97
DDX60-201ENST00000393743 NCAPD3P42695 1498 aa9□□□□□ -0.97
DDX60-201ENST00000393743 HNRNPMP52272 730 aaKnown RBP eCLIP9□□□□□ -0.97
DDX60-201ENST00000393743 RAB3GAP2Q9H2M9 1393 aa9□□□□□ -0.97
DDX60-201ENST00000393743 ZNF330Q9Y3S2 320 aaPredicted RBP9□□□□□ -0.97
DDX60-201ENST00000393743 ITPRIPQ8IWB1 547 aa8.99□□□□□ -0.97
DDX60-201ENST00000393743 WWC1Q8IX03 1113 aa8.99□□□□□ -0.97
DDX60-201ENST00000393743 RCAN3Q9UKA8 241 aa8.99□□□□□ -0.97
DDX60-201ENST00000393743 FANCD2Q9BXW9 1451 aa8.99□□□□□ -0.97
DDX60-201ENST00000393743 C1orf141Q5JVX7 400 aa8.98□□□□□ -0.97
DDX60-201ENST00000393743 COG3Q96JB2 828 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms