RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 FOXD1Q16676 465 aa17.04■□□□□ 0.32
GSE1-202ENST00000393243 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
GSE1-202ENST00000393243 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
GSE1-202ENST00000393243 PRM3Q9NNZ6 103 aa17.03■□□□□ 0.32
GSE1-202ENST00000393243 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.32
GSE1-202ENST00000393243 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.31
GSE1-202ENST00000393243 TMF1P82094 1093 aa17.01■□□□□ 0.31
GSE1-202ENST00000393243 MS4A1P11836 297 aa17.01■□□□□ 0.31
GSE1-202ENST00000393243 FOXD4L5Q5VV16 416 aaPredicted RBP17.01■□□□□ 0.31
GSE1-202ENST00000393243 ITPRIPQ8IWB1 547 aa17.01■□□□□ 0.31
GSE1-202ENST00000393243 FOXD4L4Q8WXT5 416 aaPredicted RBP17.01■□□□□ 0.31
GSE1-202ENST00000393243 RTF1Q92541 710 aaKnown RBP17.01■□□□□ 0.31
GSE1-202ENST00000393243 CHMP4BQ9H444 224 aaKnown RBP17■□□□□ 0.31
GSE1-202ENST00000393243 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
GSE1-202ENST00000393243 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
GSE1-202ENST00000393243 CHMP3Q9Y3E7 222 aa16.98■□□□□ 0.31
GSE1-202ENST00000393243 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
GSE1-202ENST00000393243 GOLGA3Q08378 1498 aa16.96■□□□□ 0.31
GSE1-202ENST00000393243 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
GSE1-202ENST00000393243 HSPA5P11021 654 aaKnown RBP16.93■□□□□ 0.3
GSE1-202ENST00000393243 TRHP20396 242 aaPredicted RBP16.93■□□□□ 0.3
GSE1-202ENST00000393243 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
GSE1-202ENST00000393243 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
GSE1-202ENST00000393243 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
GSE1-202ENST00000393243 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.33e-7■□□□□ 9.6
GSE1-202ENST00000393243 GBP4Q96PP9 640 aa16.91■□□□□ 0.3
GSE1-202ENST00000393243 A0A0U1RQG5 324 aaPredicted RBP16.91■□□□□ 0.3
GSE1-202ENST00000393243 TNNT3P45378 269 aaPredicted RBP16.91■□□□□ 0.3
GSE1-202ENST00000393243 CLUAP1Q96AJ1 413 aa16.9■□□□□ 0.3
GSE1-202ENST00000393243 CSB-PGBD3P0DP91 1061 aa16.9■□□□□ 0.3
GSE1-202ENST00000393243 FOXD4L6Q3SYB3 417 aaPredicted RBP16.9■□□□□ 0.3
GSE1-202ENST00000393243 FOXD4L3Q6VB84 417 aaPredicted RBP16.9■□□□□ 0.3
GSE1-202ENST00000393243 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
GSE1-202ENST00000393243 RCAN3Q9UKA8 241 aa16.89■□□□□ 0.29
GSE1-202ENST00000393243 GGT6Q6P531 493 aa16.88■□□□□ 0.29
GSE1-202ENST00000393243 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
GSE1-202ENST00000393243 CCDC180Q9P1Z9 1646 aa16.88■□□□□ 0.29
GSE1-202ENST00000393243 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
GSE1-202ENST00000393243 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
GSE1-202ENST00000393243 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
GSE1-202ENST00000393243 EIF4G1Q04637 1599 aaKnown RBP16.85■□□□□ 0.29
GSE1-202ENST00000393243 RASSF8Q8NHQ8 419 aa16.85■□□□□ 0.29
GSE1-202ENST00000393243 GOLGA6L3A6NEY3 463 aa16.84■□□□□ 0.29
GSE1-202ENST00000393243 SLC4A3P48751 1232 aa16.83■□□□□ 0.28
GSE1-202ENST00000393243 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
GSE1-202ENST00000393243 IPO8O15397 1037 aaKnown RBP16.83■□□□□ 0.28
GSE1-202ENST00000393243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.82■□□□□ 0.28
GSE1-202ENST00000393243 SMC4Q9NTJ3 1288 aa16.82■□□□□ 0.28
GSE1-202ENST00000393243 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
GSE1-202ENST00000393243 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
GSE1-202ENST00000393243 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
GSE1-202ENST00000393243 VPS53Q5VIR6 699 aa16.81■□□□□ 0.28
GSE1-202ENST00000393243 RWDD1Q9H446 243 aaPredicted RBP16.81■□□□□ 0.28
GSE1-202ENST00000393243 TOMM22Q9NS69 142 aa16.81■□□□□ 0.28
GSE1-202ENST00000393243 PES1O00541 588 aaKnown RBP16.81■□□□□ 0.28
GSE1-202ENST00000393243 HDGFL2Q7Z4V5 671 aaPredicted RBP16.8■□□□□ 0.28
GSE1-202ENST00000393243 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
GSE1-202ENST00000393243 TPM4P67936 248 aa16.79■□□□□ 0.28
GSE1-202ENST00000393243 CALD1Q05682 793 aaKnown RBP16.78■□□□□ 0.28
GSE1-202ENST00000393243 KANK1Q14678 1352 aa16.78■□□□□ 0.28
GSE1-202ENST00000393243 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
GSE1-202ENST00000393243 PKD2Q13563 968 aa16.78■□□□□ 0.28
GSE1-202ENST00000393243 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
GSE1-202ENST00000393243 GOLGA6L1Q8N7Z2 621 aa16.77■□□□□ 0.28
GSE1-202ENST00000393243 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.27
GSE1-202ENST00000393243 RRP7AQ9Y3A4 280 aaKnown RBP16.76■□□□□ 0.27
GSE1-202ENST00000393243 CCAR2Q8N163 923 aaKnown RBP16.76■□□□□ 0.27
GSE1-202ENST00000393243 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
GSE1-202ENST00000393243 G3V3G9 751 aa16.75■□□□□ 0.27
GSE1-202ENST00000393243 DCAF8Q5TAQ9 597 aa16.75■□□□□ 0.27
GSE1-202ENST00000393243 BCL11BQ9C0K0 894 aaPredicted RBP16.75■□□□□ 0.27
GSE1-202ENST00000393243 HTATSF1O43719 755 aaKnown RBP16.74■□□□□ 0.27
GSE1-202ENST00000393243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
GSE1-202ENST00000393243 STK31Q9BXU1 1019 aa16.73■□□□□ 0.27
GSE1-202ENST00000393243 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.273e-6■■■■□ 26.6
GSE1-202ENST00000393243 BCL2L13Q9BXK5 485 aa16.73■□□□□ 0.27
GSE1-202ENST00000393243 FRAT2O75474 233 aaPredicted RBP16.72■□□□□ 0.27
GSE1-202ENST00000393243 IPO9Q96P70 1041 aaKnown RBP16.72■□□□□ 0.27
GSE1-202ENST00000393243 GPATCH3Q96I76 525 aa16.72■□□□□ 0.27
GSE1-202ENST00000393243 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
GSE1-202ENST00000393243 RILPL2Q969X0 211 aa16.72■□□□□ 0.27
GSE1-202ENST00000393243 ELL2O00472 640 aaPredicted RBP16.72■□□□□ 0.27
GSE1-202ENST00000393243 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
GSE1-202ENST00000393243 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
GSE1-202ENST00000393243 TCERG1O14776 1098 aaKnown RBP16.72■□□□□ 0.27
GSE1-202ENST00000393243 PLIN1O60240 522 aa16.71■□□□□ 0.27
GSE1-202ENST00000393243 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
GSE1-202ENST00000393243 MARCH6O60337 910 aa16.71■□□□□ 0.27
GSE1-202ENST00000393243 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
GSE1-202ENST00000393243 TMX4Q9H1E5 349 aaPredicted RBP16.7■□□□□ 0.26
GSE1-202ENST00000393243 PTMSP20962 102 aa16.7■□□□□ 0.26
GSE1-202ENST00000393243 BAZ1BQ9UIG0 1483 aaKnown RBP16.7■□□□□ 0.26
GSE1-202ENST00000393243 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
GSE1-202ENST00000393243 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
GSE1-202ENST00000393243 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
GSE1-202ENST00000393243 ZNF592Q92610 1267 aa16.68■□□□□ 0.26
GSE1-202ENST00000393243 RAD21O60216 631 aa16.68■□□□□ 0.26
GSE1-202ENST00000393243 NGEFQ8N5V2 710 aa16.68■□□□□ 0.26
GSE1-202ENST00000393243 TPD52L1Q16890 204 aaPredicted RBP16.67■□□□□ 0.26
GSE1-202ENST00000393243 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms