RNA–Protein interactions for RNA: ENST00000393203.2

PTGFRN-201, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTGFRN, Length 6,178 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-201ENST00000393203 RAB3GAP2Q9H2M9 1393 aa19.43■□□□□ 0.7
PTGFRN-201ENST00000393203 RB1CC1Q8TDY2 1594 aa19.42■□□□□ 0.7
PTGFRN-201ENST00000393203 CHAF1AQ13111 956 aaPredicted RBP19.4■□□□□ 0.7
PTGFRN-201ENST00000393203 KTN1Q86UP2 1357 aaKnown RBP19.4■□□□□ 0.7
PTGFRN-201ENST00000393203 GOLGA6L6A8MZA4 724 aa19.39■□□□□ 0.7
PTGFRN-201ENST00000393203 TCERG1O14776 1098 aaKnown RBP19.39■□□□□ 0.69
PTGFRN-201ENST00000393203 HAP1P54257 671 aaPredicted RBP19.39■□□□□ 0.69
PTGFRN-201ENST00000393203 PKD2Q13563 968 aa19.39■□□□□ 0.69
PTGFRN-201ENST00000393203 FOXD4L1Q9NU39 408 aa19.39■□□□□ 0.69
PTGFRN-201ENST00000393203 MFAP1P55081 439 aaKnown RBP19.38■□□□□ 0.69
PTGFRN-201ENST00000393203 CHMP4BQ9H444 224 aaKnown RBP19.38■□□□□ 0.69
PTGFRN-201ENST00000393203 TIMELESSQ9UNS1 1208 aa19.38■□□□□ 0.69
PTGFRN-201ENST00000393203 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
PTGFRN-201ENST00000393203 ITPRIPQ8IWB1 547 aa19.37■□□□□ 0.69
PTGFRN-201ENST00000393203 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
PTGFRN-201ENST00000393203 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
PTGFRN-201ENST00000393203 PNNQ9H307 717 aaKnown RBP19.36■□□□□ 0.69
PTGFRN-201ENST00000393203 SLC4A3P48751 1232 aa19.36■□□□□ 0.69
PTGFRN-201ENST00000393203 VPS8Q8N3P4 1428 aa19.36■□□□□ 0.69
PTGFRN-201ENST00000393203 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
PTGFRN-201ENST00000393203 CCDC146Q8IYE0 955 aa19.34■□□□□ 0.69
PTGFRN-201ENST00000393203 FHAD1B1AJZ9 1412 aa19.33■□□□□ 0.69
PTGFRN-201ENST00000393203 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
PTGFRN-201ENST00000393203 MCCP23508 829 aa19.32■□□□□ 0.68
PTGFRN-201ENST00000393203 CLUAP1Q96AJ1 413 aa19.32■□□□□ 0.68
PTGFRN-201ENST00000393203 GBP4Q96PP9 640 aa19.32■□□□□ 0.68
PTGFRN-201ENST00000393203 STK26Q9P289 416 aa19.31■□□□□ 0.68
PTGFRN-201ENST00000393203 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
PTGFRN-201ENST00000393203 GOLGA6L3A6NEY3 463 aa19.31■□□□□ 0.68
PTGFRN-201ENST00000393203 MPHOSPH9Q99550 1183 aa19.31■□□□□ 0.68
PTGFRN-201ENST00000393203 ROCK2O75116 1388 aaKnown RBP19.3■□□□□ 0.68
PTGFRN-201ENST00000393203 U2AF1L5P0DN76 240 aaPredicted RBP19.29■□□□□ 0.68
PTGFRN-201ENST00000393203 U2AF1Q01081 240 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTGFRN-201ENST00000393203 NRDCO43847 1150 aa19.29■□□□□ 0.68
PTGFRN-201ENST00000393203 CUX2O14529 1486 aa19.28■□□□□ 0.68
PTGFRN-201ENST00000393203 RWDD1Q9H446 243 aaPredicted RBP19.28■□□□□ 0.68
PTGFRN-201ENST00000393203 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.68
PTGFRN-201ENST00000393203 NOL8Q76FK4 1167 aaKnown RBP19.27■□□□□ 0.68
PTGFRN-201ENST00000393203 PLIN1O60240 522 aa19.26■□□□□ 0.67
PTGFRN-201ENST00000393203 RALBP1Q15311 655 aa19.25■□□□□ 0.67
PTGFRN-201ENST00000393203 L3MBTL2Q969R5 705 aa19.24■□□□□ 0.67
PTGFRN-201ENST00000393203 FOXD4L5Q5VV16 416 aaPredicted RBP19.23■□□□□ 0.67
PTGFRN-201ENST00000393203 FOXD4L4Q8WXT5 416 aaPredicted RBP19.23■□□□□ 0.67
PTGFRN-201ENST00000393203 KIAA2012Q0VF49 1180 aa19.22■□□□□ 0.67
PTGFRN-201ENST00000393203 IPO8O15397 1037 aaKnown RBP19.22■□□□□ 0.67
PTGFRN-201ENST00000393203 MLECQ14165 292 aa19.21■□□□□ 0.67
PTGFRN-201ENST00000393203 SMC4Q9NTJ3 1288 aa19.2■□□□□ 0.66
PTGFRN-201ENST00000393203 GOLGA2Q08379 1002 aa19.19■□□□□ 0.66
PTGFRN-201ENST00000393203 RTF1Q92541 710 aaKnown RBP19.19■□□□□ 0.66
PTGFRN-201ENST00000393203 NPHP1O15259 732 aa19.19■□□□□ 0.66
PTGFRN-201ENST00000393203 KIAA1211Q6ZU35 1233 aa19.19■□□□□ 0.66
PTGFRN-201ENST00000393203 PMFBP1Q8TBY8 1022 aa19.18■□□□□ 0.66
PTGFRN-201ENST00000393203 EXOC6Q8TAG9 804 aa19.18■□□□□ 0.66
PTGFRN-201ENST00000393203 PDE4AP27815 886 aa19.17■□□□□ 0.66
PTGFRN-201ENST00000393203 NUP155O75694 1391 aa19.16■□□□□ 0.66
PTGFRN-201ENST00000393203 GGT6Q6P531 493 aa19.16■□□□□ 0.66
PTGFRN-201ENST00000393203 GNL2Q13823 731 aaKnown RBP19.16■□□□□ 0.66
PTGFRN-201ENST00000393203 RRP7AQ9Y3A4 280 aaKnown RBP19.16■□□□□ 0.66
PTGFRN-201ENST00000393203 KANK1Q14678 1352 aa19.15■□□□□ 0.66
PTGFRN-201ENST00000393203 TRIM6-TRIM34B2RNG4 842 aa19.14■□□□□ 0.65
PTGFRN-201ENST00000393203 BCL2L13Q9BXK5 485 aa19.14■□□□□ 0.65
PTGFRN-201ENST00000393203 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
PTGFRN-201ENST00000393203 CALD1Q05682 793 aaKnown RBP19.13■□□□□ 0.65
PTGFRN-201ENST00000393203 CENPJQ9HC77 1338 aaPredicted RBP19.13■□□□□ 0.65
PTGFRN-201ENST00000393203 PTMSP20962 102 aa19.12■□□□□ 0.65
PTGFRN-201ENST00000393203 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
PTGFRN-201ENST00000393203 DHX57Q6P158 1386 aaKnown RBP19.11■□□□□ 0.65
PTGFRN-201ENST00000393203 GSE1Q14687 1217 aa19.11■□□□□ 0.65
PTGFRN-201ENST00000393203 HDGFL2Q7Z4V5 671 aaPredicted RBP19.11■□□□□ 0.65
PTGFRN-201ENST00000393203 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
PTGFRN-201ENST00000393203 FOXD4L6Q3SYB3 417 aaPredicted RBP19.1■□□□□ 0.65
PTGFRN-201ENST00000393203 SLC4A10Q6U841 1118 aa19.1■□□□□ 0.65
PTGFRN-201ENST00000393203 FOXD4L3Q6VB84 417 aaPredicted RBP19.1■□□□□ 0.65
PTGFRN-201ENST00000393203 CFAP44Q96MT7 982 aa19.1■□□□□ 0.65
PTGFRN-201ENST00000393203 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
PTGFRN-201ENST00000393203 SYAP1Q96A49 352 aaPredicted RBP19.09■□□□□ 0.65
PTGFRN-201ENST00000393203 HSP90B1P14625 803 aaKnown RBP19.08■□□□□ 0.65
PTGFRN-201ENST00000393203 HSP90AA2PQ14568 343 aaPredicted RBP19.08■□□□□ 0.65
PTGFRN-201ENST00000393203 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
PTGFRN-201ENST00000393203 CLSTN1O94985 981 aa19.07■□□□□ 0.64
PTGFRN-201ENST00000393203 ISY1Q9ULR0 285 aaKnown RBP19.07■□□□□ 0.64
PTGFRN-201ENST00000393203 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
PTGFRN-201ENST00000393203 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
PTGFRN-201ENST00000393203 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
PTGFRN-201ENST00000393203 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
PTGFRN-201ENST00000393203 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
PTGFRN-201ENST00000393203 ST20-MTHFSA0A0A6YYL1 179 aa19.04■□□□□ 0.64
PTGFRN-201ENST00000393203 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
PTGFRN-201ENST00000393203 PRKRIP1Q9H875 184 aaPredicted RBP19.03■□□□□ 0.64
PTGFRN-201ENST00000393203 PDE3BQ13370 1112 aa19.03■□□□□ 0.64
PTGFRN-201ENST00000393203 HNRNPMP52272 730 aaKnown RBP eCLIP19.02■□□□□ 0.64
PTGFRN-201ENST00000393203 PANK3Q9H999 370 aa19.02■□□□□ 0.64
PTGFRN-201ENST00000393203 NACADO15069 1562 aa19.02■□□□□ 0.64
PTGFRN-201ENST00000393203 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
PTGFRN-201ENST00000393203 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
PTGFRN-201ENST00000393203 MYBBP1AQ9BQG0 1328 aaKnown RBP19.01■□□□□ 0.63
PTGFRN-201ENST00000393203 CENPQQ7L2Z9 268 aaPredicted RBP19.01■□□□□ 0.63
PTGFRN-201ENST00000393203 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
PTGFRN-201ENST00000393203 COG6Q9Y2V7 657 aa19.01■□□□□ 0.63
PTGFRN-201ENST00000393203 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms