RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
CASP4-201ENST00000393150 MAP3K4Q9Y6R4 1608 aa13.62□□□□□ -0.23
CASP4-201ENST00000393150 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
CASP4-201ENST00000393150 WDR7Q9Y4E6 1490 aa13.61□□□□□ -0.23
CASP4-201ENST00000393150 ARID4BQ4LE39 1312 aaPredicted RBP13.6□□□□□ -0.23
CASP4-201ENST00000393150 LMTK3Q96Q04 1460 aa13.57□□□□□ -0.24
CASP4-201ENST00000393150 MAGI3Q5TCQ9 1506 aa13.57□□□□□ -0.24
CASP4-201ENST00000393150 ZCCHC11Q5TAX3 1644 aaKnown RBP13.55□□□□□ -0.24
CASP4-201ENST00000393150 PHLDB1Q86UU1 1377 aa13.54□□□□□ -0.24
CASP4-201ENST00000393150 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
CASP4-201ENST00000393150 MIER1Q8N108 512 aa13.52□□□□□ -0.25
CASP4-201ENST00000393150 PLCD3Q8N3E9 789 aa13.52□□□□□ -0.25
CASP4-201ENST00000393150 CHRDL2Q6WN34 429 aa13.51□□□□□ -0.25
CASP4-201ENST00000393150 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
CASP4-201ENST00000393150 PTPRMP28827 1452 aa13.51□□□□□ -0.25
CASP4-201ENST00000393150 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
CASP4-201ENST00000393150 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
CASP4-201ENST00000393150 UGGT2Q9NYU1 1516 aa13.51□□□□□ -0.25
CASP4-201ENST00000393150 CFAP43Q8NDM7 1665 aa13.51□□□□□ -0.25
CASP4-201ENST00000393150 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
CASP4-201ENST00000393150 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
CASP4-201ENST00000393150 KIF21BO75037 1637 aa13.47□□□□□ -0.25
CASP4-201ENST00000393150 ARAP3Q8WWN8 1544 aa13.47□□□□□ -0.25
CASP4-201ENST00000393150 DISP3Q9P2K9 1392 aa13.46□□□□□ -0.25
CASP4-201ENST00000393150 PKD2Q13563 968 aa13.46□□□□□ -0.25
CASP4-201ENST00000393150 CERKQ8TCT0 537 aa13.46□□□□□ -0.25
CASP4-201ENST00000393150 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
CASP4-201ENST00000393150 KIAA0556O60303 1618 aa13.46□□□□□ -0.25
CASP4-201ENST00000393150 SOCS7O14512 581 aa13.45□□□□□ -0.26
CASP4-201ENST00000393150 RAPGEF3O95398 923 aa13.45□□□□□ -0.26
CASP4-201ENST00000393150 PCF11O94913 1555 aaKnown RBP13.44□□□□□ -0.26
CASP4-201ENST00000393150 POGZQ7Z3K3 1410 aa13.43□□□□□ -0.26
CASP4-201ENST00000393150 ARID3CA6NKF2 412 aa13.42□□□□□ -0.26
CASP4-201ENST00000393150 HSPA2P54652 639 aa13.39□□□□□ -0.27
CASP4-201ENST00000393150 CLEC11AQ9Y240 323 aa13.39□□□□□ -0.27
CASP4-201ENST00000393150 ADAMTSL3P82987 1691 aa13.38□□□□□ -0.27
CASP4-201ENST00000393150 NEO1Q92859 1461 aa13.38□□□□□ -0.27
CASP4-201ENST00000393150 ABCA8O94911 1581 aa13.37□□□□□ -0.27
CASP4-201ENST00000393150 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
CASP4-201ENST00000393150 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
CASP4-201ENST00000393150 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
CASP4-201ENST00000393150 CREBZFQ9NS37 354 aa13.34□□□□□ -0.27
CASP4-201ENST00000393150 BCORL1Q5H9F3 1711 aa13.33□□□□□ -0.28
CASP4-201ENST00000393150 AKNAQ7Z591 1439 aa13.33□□□□□ -0.28
CASP4-201ENST00000393150 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
CASP4-201ENST00000393150 MLECQ14165 292 aa13.33□□□□□ -0.28
CASP4-201ENST00000393150 FANCAO15360 1455 aa13.33□□□□□ -0.28
CASP4-201ENST00000393150 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
CASP4-201ENST00000393150 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
CASP4-201ENST00000393150 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
CASP4-201ENST00000393150 DENND4BO75064 1496 aaPredicted RBP13.32□□□□□ -0.28
CASP4-201ENST00000393150 ATP10BO94823 1461 aa13.32□□□□□ -0.28
CASP4-201ENST00000393150 ILDR2Q71H61 639 aa13.31□□□□□ -0.28
CASP4-201ENST00000393150 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
CASP4-201ENST00000393150 ABCA9Q8IUA7 1624 aa13.29□□□□□ -0.28
CASP4-201ENST00000393150 CTTNBP2Q8WZ74 1663 aa13.29□□□□□ -0.28
CASP4-201ENST00000393150 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
CASP4-201ENST00000393150 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
CASP4-201ENST00000393150 MYT1LQ9UL68 1186 aa13.26□□□□□ -0.29
CASP4-201ENST00000393150 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
CASP4-201ENST00000393150 ARHGEF40Q8TER5 1519 aa13.23□□□□□ -0.29
CASP4-201ENST00000393150 MAGI2Q86UL8 1455 aa13.23□□□□□ -0.29
CASP4-201ENST00000393150 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
CASP4-201ENST00000393150 NUBP1P53384 320 aa13.23□□□□□ -0.29
CASP4-201ENST00000393150 EFCAB5A4FU69 1503 aa13.23□□□□□ -0.29
CASP4-201ENST00000393150 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
CASP4-201ENST00000393150 CFAP74Q9C0B2 1584 aa13.22□□□□□ -0.29
CASP4-201ENST00000393150 ECM2O94769 699 aaPredicted RBP13.21□□□□□ -0.29
CASP4-201ENST00000393150 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
CASP4-201ENST00000393150 UHRF1BP1Q6BDS2 1440 aa13.2□□□□□ -0.3
CASP4-201ENST00000393150 SLC24A1O60721 1099 aa13.19□□□□□ -0.3
CASP4-201ENST00000393150 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
CASP4-201ENST00000393150 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
CASP4-201ENST00000393150 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
CASP4-201ENST00000393150 FRMPD1Q5SYB0 1578 aa13.17□□□□□ -0.3
CASP4-201ENST00000393150 SPATA31D1Q6ZQQ2 1576 aa13.17□□□□□ -0.3
CASP4-201ENST00000393150 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
CASP4-201ENST00000393150 CEBPAP49715 358 aaPredicted RBP13.16□□□□□ -0.3
CASP4-201ENST00000393150 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
CASP4-201ENST00000393150 CDK11AQ9UQ88 783 aaPredicted RBP13.16□□□□□ -0.3
CASP4-201ENST00000393150 RGL2O15211 777 aa13.15□□□□□ -0.3
CASP4-201ENST00000393150 ATP10AO60312 1499 aa13.14□□□□□ -0.31
CASP4-201ENST00000393150 FER1L4A9Z1Z3 1794 aa13.14□□□□□ -0.31
CASP4-201ENST00000393150 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
CASP4-201ENST00000393150 SCAPERQ9BY12 1400 aa13.14□□□□□ -0.31
CASP4-201ENST00000393150 PTPRTO14522 1441 aa13.13□□□□□ -0.31
CASP4-201ENST00000393150 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
CASP4-201ENST00000393150 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
CASP4-201ENST00000393150 RICTORQ6R327 1708 aa13.13□□□□□ -0.31
CASP4-201ENST00000393150 PREX1Q8TCU6 1659 aa13.13□□□□□ -0.31
CASP4-201ENST00000393150 TTC37Q6PGP7 1564 aa13.13□□□□□ -0.31
CASP4-201ENST00000393150 ATP1B4Q9UN42 357 aaPredicted RBP13.13□□□□□ -0.31
CASP4-201ENST00000393150 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
CASP4-201ENST00000393150 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
CASP4-201ENST00000393150 PIP4P2Q8N4L2 257 aa13.12□□□□□ -0.31
CASP4-201ENST00000393150 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
CASP4-201ENST00000393150 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
CASP4-201ENST00000393150 RASEFQ8IZ41 740 aa13.09□□□□□ -0.31
CASP4-201ENST00000393150 PLCH2O75038 1416 aa13.08□□□□□ -0.32
CASP4-201ENST00000393150 GSE1Q14687 1217 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms