RNA–Protein interactions for RNA: ENST00000392995.7

PPM1D-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 2

Gene PPM1D, Length 2,996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-202ENST00000392995 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
PPM1D-202ENST00000392995 MYOM3Q5VTT5 1437 aa20.6■□□□□ 0.89
PPM1D-202ENST00000392995 CNGB1Q14028 1251 aaPredicted RBP20.6■□□□□ 0.89
PPM1D-202ENST00000392995 SUPT6HQ7KZ85 1726 aaKnown RBP20.6■□□□□ 0.89
PPM1D-202ENST00000392995 DEKP35659 375 aaKnown RBP20.59■□□□□ 0.89
PPM1D-202ENST00000392995 PTPRKQ15262 1439 aa20.58■□□□□ 0.88
PPM1D-202ENST00000392995 TONSLQ96HA7 1378 aa20.57■□□□□ 0.88
PPM1D-202ENST00000392995 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
PPM1D-202ENST00000392995 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
PPM1D-202ENST00000392995 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
PPM1D-202ENST00000392995 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
PPM1D-202ENST00000392995 PTPRGP23470 1445 aa20.53■□□□□ 0.88
PPM1D-202ENST00000392995 ZNF644Q9H582 1327 aaPredicted RBP20.53■□□□□ 0.88
PPM1D-202ENST00000392995 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
PPM1D-202ENST00000392995 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
PPM1D-202ENST00000392995 RRP7BPQ9NSQ0 103 aa20.48■□□□□ 0.87
PPM1D-202ENST00000392995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.48■□□□□ 0.87
PPM1D-202ENST00000392995 PPP4R2Q9NY27 417 aa20.47■□□□□ 0.87
PPM1D-202ENST00000392995 TIMELESSQ9UNS1 1208 aa20.46■□□□□ 0.87
PPM1D-202ENST00000392995 ATP10BO94823 1461 aa20.46■□□□□ 0.87
PPM1D-202ENST00000392995 ABCA8O94911 1581 aa20.46■□□□□ 0.87
PPM1D-202ENST00000392995 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
PPM1D-202ENST00000392995 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
PPM1D-202ENST00000392995 HSPA5P11021 654 aaKnown RBP20.44■□□□□ 0.86
PPM1D-202ENST00000392995 TROQ12816 1431 aaPredicted RBP20.44■□□□□ 0.86
PPM1D-202ENST00000392995 PLEKHD1A6NEE1 506 aa20.44■□□□□ 0.86
PPM1D-202ENST00000392995 KIF14Q15058 1648 aa20.42■□□□□ 0.86
PPM1D-202ENST00000392995 CFDP1Q9UEE9 299 aaPredicted RBP20.4■□□□□ 0.86
PPM1D-202ENST00000392995 SHROOM2Q13796 1616 aa20.39■□□□□ 0.86
PPM1D-202ENST00000392995 C11orf95C9JLR9 678 aaPredicted RBP20.39■□□□□ 0.85
PPM1D-202ENST00000392995 MRS2Q9HD23 443 aa20.37■□□□□ 0.85
PPM1D-202ENST00000392995 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
PPM1D-202ENST00000392995 NOP58Q9Y2X3 529 aaKnown RBP20.37■□□□□ 0.85
PPM1D-202ENST00000392995 MIA2Q96PC5 1412 aa20.37■□□□□ 0.85
PPM1D-202ENST00000392995 UACAQ9BZF9 1416 aa20.37■□□□□ 0.85
PPM1D-202ENST00000392995 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
PPM1D-202ENST00000392995 NAIPQ13075 1403 aa20.36■□□□□ 0.85
PPM1D-202ENST00000392995 FOXD1Q16676 465 aa20.35■□□□□ 0.85
PPM1D-202ENST00000392995 HFM1A2PYH4 1435 aa20.35■□□□□ 0.85
PPM1D-202ENST00000392995 ANO8Q9HCE9 1232 aaPredicted RBP20.34■□□□□ 0.85
PPM1D-202ENST00000392995 PRKCSHP14314 528 aaPredicted RBP20.34■□□□□ 0.85
PPM1D-202ENST00000392995 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
PPM1D-202ENST00000392995 ABCC5O15440 1437 aa20.29■□□□□ 0.84
PPM1D-202ENST00000392995 RTN4Q9NQC3 1192 aaKnown RBP20.28■□□□□ 0.84
PPM1D-202ENST00000392995 DAPK1P53355 1430 aa20.28■□□□□ 0.84
PPM1D-202ENST00000392995 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
PPM1D-202ENST00000392995 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.84
PPM1D-202ENST00000392995 CAMSAP2Q08AD1 1489 aa20.26■□□□□ 0.83
PPM1D-202ENST00000392995 KDM6BO15054 1643 aa20.26■□□□□ 0.83
PPM1D-202ENST00000392995 EIF4G2P78344 907 aaKnown RBP eCLIP20.26■□□□□ 0.83
PPM1D-202ENST00000392995 ABCC10Q5T3U5 1492 aa20.25■□□□□ 0.83
PPM1D-202ENST00000392995 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
PPM1D-202ENST00000392995 ABCC2Q92887 1545 aa20.23■□□□□ 0.83
PPM1D-202ENST00000392995 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
PPM1D-202ENST00000392995 AKNAQ7Z591 1439 aa20.23■□□□□ 0.83
PPM1D-202ENST00000392995 HNRNPMP52272 730 aaKnown RBP eCLIP20.22■□□□□ 0.83
PPM1D-202ENST00000392995 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
PPM1D-202ENST00000392995 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
PPM1D-202ENST00000392995 L3MBTL2Q969R5 705 aa20.21■□□□□ 0.83
PPM1D-202ENST00000392995 ERICH6BQ5W0A0 696 aa20.2■□□□□ 0.82
PPM1D-202ENST00000392995 CCDC136Q96JN2 1154 aa20.2■□□□□ 0.82
PPM1D-202ENST00000392995 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.82
PPM1D-202ENST00000392995 CDC42BPAQ5VT25 1732 aa20.19■□□□□ 0.82
PPM1D-202ENST00000392995 DNMT1P26358 1616 aaKnown RBP20.19■□□□□ 0.82
PPM1D-202ENST00000392995 ZBED9Q6R2W3 1325 aa20.17■□□□□ 0.82
PPM1D-202ENST00000392995 ITSN2Q9NZM3 1697 aa20.17■□□□□ 0.82
PPM1D-202ENST00000392995 KDM5BQ9UGL1 1544 aa20.16■□□□□ 0.82
PPM1D-202ENST00000392995 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
PPM1D-202ENST00000392995 ZBTB47Q9UFB7 747 aaPredicted RBP20.15■□□□□ 0.82
PPM1D-202ENST00000392995 ANP32AP39687 249 aaKnown RBP20.14■□□□□ 0.81
PPM1D-202ENST00000392995 CNTLNQ9NXG0 1405 aa20.14■□□□□ 0.81
PPM1D-202ENST00000392995 NBPF8Q3BBV2 869 aa20.13■□□□□ 0.81
PPM1D-202ENST00000392995 RTL5Q5HYW3 569 aaPredicted RBP20.13■□□□□ 0.81
PPM1D-202ENST00000392995 IPO9Q96P70 1041 aaKnown RBP20.13■□□□□ 0.81
PPM1D-202ENST00000392995 TTC37Q6PGP7 1564 aa20.13■□□□□ 0.81
PPM1D-202ENST00000392995 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
PPM1D-202ENST00000392995 ZCCHC11Q5TAX3 1644 aaKnown RBP20.12■□□□□ 0.81
PPM1D-202ENST00000392995 GCC2Q8IWJ2 1684 aa20.12■□□□□ 0.81
PPM1D-202ENST00000392995 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
PPM1D-202ENST00000392995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.12■□□□□ 0.81
PPM1D-202ENST00000392995 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
PPM1D-202ENST00000392995 DENND4BO75064 1496 aaPredicted RBP20.11■□□□□ 0.81
PPM1D-202ENST00000392995 ROCK1Q13464 1354 aa20.11■□□□□ 0.81
PPM1D-202ENST00000392995 CCDC7Q96M83 1385 aa20.11■□□□□ 0.81
PPM1D-202ENST00000392995 CDC42BPBQ9Y5S2 1711 aa20.08■□□□□ 0.81
PPM1D-202ENST00000392995 TSPY4P0CV99 314 aa20.08■□□□□ 0.8
PPM1D-202ENST00000392995 TSPY10P0CW01 314 aa20.08■□□□□ 0.8
PPM1D-202ENST00000392995 KIF7Q2M1P5 1343 aa20.08■□□□□ 0.8
PPM1D-202ENST00000392995 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
PPM1D-202ENST00000392995 UHRF1BP1LA0JNW5 1464 aa20.07■□□□□ 0.8
PPM1D-202ENST00000392995 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.07■□□□□ 0.8
PPM1D-202ENST00000392995 ARHGAP5Q13017 1502 aa20.07■□□□□ 0.8
PPM1D-202ENST00000392995 SAMD9LQ8IVG5 1584 aa20.05■□□□□ 0.8
PPM1D-202ENST00000392995 C9orf84Q5VXU9 1444 aa20.05■□□□□ 0.8
PPM1D-202ENST00000392995 MBD5Q9P267 1494 aa20.05■□□□□ 0.8
PPM1D-202ENST00000392995 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
PPM1D-202ENST00000392995 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
PPM1D-202ENST00000392995 SKAP1Q86WV1 359 aa20.03■□□□□ 0.8
PPM1D-202ENST00000392995 PREX2Q70Z35 1606 aa20.02■□□□□ 0.8
PPM1D-202ENST00000392995 NUDCQ9Y266 331 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms