RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.27
LCA5-202ENST00000392959 ARID4BQ4LE39 1312 aaPredicted RBP16.71■□□□□ 0.27
LCA5-202ENST00000392959 GOLGA6L4A6NEF3 574 aa16.71■□□□□ 0.27
LCA5-202ENST00000392959 NRDCO43847 1150 aa16.71■□□□□ 0.27
LCA5-202ENST00000392959 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.26
LCA5-202ENST00000392959 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
LCA5-202ENST00000392959 GOLGA6L6A8MZA4 724 aa16.7■□□□□ 0.26
LCA5-202ENST00000392959 HAP1P54257 671 aaPredicted RBP16.7■□□□□ 0.26
LCA5-202ENST00000392959 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
LCA5-202ENST00000392959 KANK1Q14678 1352 aa16.68■□□□□ 0.26
LCA5-202ENST00000392959 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
LCA5-202ENST00000392959 MCCP23508 829 aa16.68■□□□□ 0.26
LCA5-202ENST00000392959 LMOD2Q6P5Q4 547 aa16.68■□□□□ 0.26
LCA5-202ENST00000392959 SLKQ9H2G2 1235 aaPredicted RBP16.67■□□□□ 0.26
LCA5-202ENST00000392959 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
LCA5-202ENST00000392959 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
LCA5-202ENST00000392959 IPO9Q96P70 1041 aaKnown RBP16.67■□□□□ 0.26
LCA5-202ENST00000392959 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
LCA5-202ENST00000392959 TAOK2Q9UL54 1235 aa16.65■□□□□ 0.26
LCA5-202ENST00000392959 GBP4Q96PP9 640 aa16.65■□□□□ 0.26
LCA5-202ENST00000392959 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
LCA5-202ENST00000392959 NAP1L2Q9ULW6 460 aaPredicted RBP16.64■□□□□ 0.25
LCA5-202ENST00000392959 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
LCA5-202ENST00000392959 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
LCA5-202ENST00000392959 ABCC8Q09428 1581 aa16.63■□□□□ 0.25
LCA5-202ENST00000392959 U2AF1L5P0DN76 240 aaPredicted RBP16.63■□□□□ 0.25
LCA5-202ENST00000392959 U2AF1Q01081 240 aaKnown RBP eCLIP16.63■□□□□ 0.25
LCA5-202ENST00000392959 ROCK2O75116 1388 aaKnown RBP16.63■□□□□ 0.25
LCA5-202ENST00000392959 GZF1Q9H116 711 aaPredicted RBP16.62■□□□□ 0.25
LCA5-202ENST00000392959 NUP155O75694 1391 aa16.61■□□□□ 0.25
LCA5-202ENST00000392959 FMN1Q68DA7 1419 aa16.61■□□□□ 0.25
LCA5-202ENST00000392959 NLRP13Q86W25 1043 aa16.61■□□□□ 0.25
LCA5-202ENST00000392959 SOX12O15370 315 aa16.6■□□□□ 0.25
LCA5-202ENST00000392959 PDE3BQ13370 1112 aa16.6■□□□□ 0.25
LCA5-202ENST00000392959 APBB1O00213 710 aa16.6■□□□□ 0.25
LCA5-202ENST00000392959 PTMSP20962 102 aa16.59■□□□□ 0.25
LCA5-202ENST00000392959 GOLGA2Q08379 1002 aa16.59■□□□□ 0.25
LCA5-202ENST00000392959 ITPRIPQ8IWB1 547 aa16.59■□□□□ 0.25
LCA5-202ENST00000392959 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.25
LCA5-202ENST00000392959 PMFBP1Q8TBY8 1022 aa16.58■□□□□ 0.25
LCA5-202ENST00000392959 RTF1Q92541 710 aaKnown RBP16.57■□□□□ 0.24
LCA5-202ENST00000392959 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
LCA5-202ENST00000392959 CALD1Q05682 793 aaKnown RBP16.56■□□□□ 0.24
LCA5-202ENST00000392959 DRC7Q8IY82 874 aa16.56■□□□□ 0.24
LCA5-202ENST00000392959 KIAA1211Q6ZU35 1233 aa16.55■□□□□ 0.24
LCA5-202ENST00000392959 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
LCA5-202ENST00000392959 STK26Q9P289 416 aa16.55■□□□□ 0.24
LCA5-202ENST00000392959 HDGFP51858 240 aaKnown RBP16.55■□□□□ 0.24
LCA5-202ENST00000392959 GGT6Q6P531 493 aa16.55■□□□□ 0.24
LCA5-202ENST00000392959 MFAP1P55081 439 aaKnown RBP16.54■□□□□ 0.24
LCA5-202ENST00000392959 KIAA2012Q0VF49 1180 aa16.53■□□□□ 0.24
LCA5-202ENST00000392959 GOLGA6L3A6NEY3 463 aa16.53■□□□□ 0.24
LCA5-202ENST00000392959 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
LCA5-202ENST00000392959 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.23
LCA5-202ENST00000392959 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.23
LCA5-202ENST00000392959 ERCC6Q03468 1493 aa16.52■□□□□ 0.23
LCA5-202ENST00000392959 TULP1O00294 542 aaPredicted RBP16.51■□□□□ 0.23
LCA5-202ENST00000392959 CENPJQ9HC77 1338 aaPredicted RBP16.49■□□□□ 0.23
LCA5-202ENST00000392959 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
LCA5-202ENST00000392959 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
LCA5-202ENST00000392959 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
LCA5-202ENST00000392959 EFCAB2Q5VUJ9 269 aa16.47■□□□□ 0.23
LCA5-202ENST00000392959 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
LCA5-202ENST00000392959 MLECQ14165 292 aa16.47■□□□□ 0.23
LCA5-202ENST00000392959 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
LCA5-202ENST00000392959 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
LCA5-202ENST00000392959 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
LCA5-202ENST00000392959 TDRD9Q8NDG6 1382 aaKnown RBP16.46■□□□□ 0.23
LCA5-202ENST00000392959 EIF3AQ14152 1382 aaKnown RBP16.46■□□□□ 0.23
LCA5-202ENST00000392959 NPHP1O15259 732 aa16.46■□□□□ 0.23
LCA5-202ENST00000392959 PDE4AP27815 886 aa16.45■□□□□ 0.22
LCA5-202ENST00000392959 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
LCA5-202ENST00000392959 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
LCA5-202ENST00000392959 ST20-MTHFSA0A0A6YYL1 179 aa16.43■□□□□ 0.22
LCA5-202ENST00000392959 HMMRO75330 724 aa16.43■□□□□ 0.22
LCA5-202ENST00000392959 STK31Q9BXU1 1019 aa16.43■□□□□ 0.22
LCA5-202ENST00000392959 HTATSF1O43719 755 aaKnown RBP16.43■□□□□ 0.22
LCA5-202ENST00000392959 ZBED9Q6R2W3 1325 aa16.43■□□□□ 0.22
LCA5-202ENST00000392959 GNL2Q13823 731 aaKnown RBP16.43■□□□□ 0.22
LCA5-202ENST00000392959 FHOD3Q2V2M9 1422 aa16.42■□□□□ 0.22
LCA5-202ENST00000392959 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
LCA5-202ENST00000392959 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
LCA5-202ENST00000392959 TERF2IPQ9NYB0 399 aa16.41■□□□□ 0.22
LCA5-202ENST00000392959 RAPGEF2Q9Y4G8 1499 aa16.4■□□□□ 0.22
LCA5-202ENST00000392959 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
LCA5-202ENST00000392959 KIF3BO15066 747 aa16.4■□□□□ 0.22
LCA5-202ENST00000392959 EXOC6Q8TAG9 804 aa16.4■□□□□ 0.22
LCA5-202ENST00000392959 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
LCA5-202ENST00000392959 ARID3AQ99856 593 aa16.39■□□□□ 0.21
LCA5-202ENST00000392959 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
LCA5-202ENST00000392959 RSPH4AQ5TD94 716 aa16.39■□□□□ 0.21
LCA5-202ENST00000392959 SPAG9O60271 1321 aaKnown RBP16.39■□□□□ 0.21
LCA5-202ENST00000392959 RRP1P56182 461 aaKnown RBP16.38■□□□□ 0.21
LCA5-202ENST00000392959 FOXD4L1Q9NU39 408 aa16.38■□□□□ 0.21
LCA5-202ENST00000392959 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
LCA5-202ENST00000392959 PANK3Q9H999 370 aa16.38■□□□□ 0.21
LCA5-202ENST00000392959 PLIN1O60240 522 aa16.37■□□□□ 0.21
LCA5-202ENST00000392959 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
LCA5-202ENST00000392959 HDAC5Q9UQL6 1122 aa16.36■□□□□ 0.21
LCA5-202ENST00000392959 SMARCA2P51531 1590 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms