RNA–Protein interactions for RNA: ENST00000392687.4

CERS6-202, Transcript of ceramide synthase 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CERS6, Length 6,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERS6-202ENST00000392687 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
CERS6-202ENST00000392687 MLECQ14165 292 aa18.41■□□□□ 0.54
CERS6-202ENST00000392687 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
CERS6-202ENST00000392687 CCDC88BA6NC98 1476 aa18.4■□□□□ 0.54
CERS6-202ENST00000392687 SRPK2P78362 688 aaKnown RBP18.4■□□□□ 0.54
CERS6-202ENST00000392687 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
CERS6-202ENST00000392687 SLC4A3P48751 1232 aa18.39■□□□□ 0.53
CERS6-202ENST00000392687 FGD1P98174 961 aa18.39■□□□□ 0.53
CERS6-202ENST00000392687 CUX2O14529 1486 aa18.37■□□□□ 0.53
CERS6-202ENST00000392687 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
CERS6-202ENST00000392687 CARMIL1Q5VZK9 1371 aa18.36■□□□□ 0.53
CERS6-202ENST00000392687 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.53
CERS6-202ENST00000392687 PLIN1O60240 522 aa18.33■□□□□ 0.52
CERS6-202ENST00000392687 MFAP1P55081 439 aaKnown RBP18.33■□□□□ 0.52
CERS6-202ENST00000392687 NUTM2DQ5VT03 806 aaPredicted RBP18.32■□□□□ 0.52
CERS6-202ENST00000392687 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
CERS6-202ENST00000392687 ITPRIPQ8IWB1 547 aa18.32■□□□□ 0.52
CERS6-202ENST00000392687 MSNP26038 577 aaKnown RBP18.32■□□□□ 0.52
CERS6-202ENST00000392687 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
CERS6-202ENST00000392687 ARHGAP35Q9NRY4 1499 aa18.29■□□□□ 0.52
CERS6-202ENST00000392687 U2AF1L5P0DN76 240 aaPredicted RBP18.29■□□□□ 0.52
CERS6-202ENST00000392687 U2AF1Q01081 240 aaKnown RBP eCLIP18.29■□□□□ 0.52
CERS6-202ENST00000392687 GGT6Q6P531 493 aa18.29■□□□□ 0.52
CERS6-202ENST00000392687 NOL8Q76FK4 1167 aaKnown RBP18.29■□□□□ 0.52
CERS6-202ENST00000392687 DRC7Q8IY82 874 aa18.28■□□□□ 0.52
CERS6-202ENST00000392687 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
CERS6-202ENST00000392687 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
CERS6-202ENST00000392687 IPO9Q96P70 1041 aaKnown RBP18.27■□□□□ 0.51
CERS6-202ENST00000392687 GOLGA6L4A6NEF3 574 aa18.26■□□□□ 0.51
CERS6-202ENST00000392687 FOXD4L5Q5VV16 416 aaPredicted RBP18.26■□□□□ 0.51
CERS6-202ENST00000392687 FOXD4L4Q8WXT5 416 aaPredicted RBP18.26■□□□□ 0.51
CERS6-202ENST00000392687 FHAD1B1AJZ9 1412 aa18.26■□□□□ 0.51
CERS6-202ENST00000392687 L1TD1Q5T7N2 865 aaKnown RBP18.25■□□□□ 0.51
CERS6-202ENST00000392687 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
CERS6-202ENST00000392687 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
CERS6-202ENST00000392687 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
CERS6-202ENST00000392687 MS4A1P11836 297 aa18.21■□□□□ 0.51
CERS6-202ENST00000392687 TCERG1O14776 1098 aaKnown RBP18.21■□□□□ 0.51
CERS6-202ENST00000392687 NPHP1O15259 732 aa18.2■□□□□ 0.5
CERS6-202ENST00000392687 NUP155O75694 1391 aa18.19■□□□□ 0.5
CERS6-202ENST00000392687 BAZ1AQ9NRL2 1556 aaPredicted RBP18.18■□□□□ 0.5
CERS6-202ENST00000392687 EXOC6Q8TAG9 804 aa18.18■□□□□ 0.5
CERS6-202ENST00000392687 HNRNPMP52272 730 aaKnown RBP eCLIP18.17■□□□□ 0.54e-6■■■■□ 24.3
CERS6-202ENST00000392687 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
CERS6-202ENST00000392687 TIMELESSQ9UNS1 1208 aa18.17■□□□□ 0.5
CERS6-202ENST00000392687 FOXD4L6Q3SYB3 417 aaPredicted RBP18.16■□□□□ 0.5
CERS6-202ENST00000392687 FOXD4L3Q6VB84 417 aaPredicted RBP18.16■□□□□ 0.5
CERS6-202ENST00000392687 ZNF330Q9Y3S2 320 aaPredicted RBP18.16■□□□□ 0.5
CERS6-202ENST00000392687 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
CERS6-202ENST00000392687 NUTM2FA1L443 756 aa18.15■□□□□ 0.5
CERS6-202ENST00000392687 RTF1Q92541 710 aaKnown RBP18.14■□□□□ 0.49
CERS6-202ENST00000392687 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
CERS6-202ENST00000392687 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
CERS6-202ENST00000392687 MCCP23508 829 aa18.14■□□□□ 0.49
CERS6-202ENST00000392687 RWDD1Q9H446 243 aaPredicted RBP18.14■□□□□ 0.49
CERS6-202ENST00000392687 CHAF1AQ13111 956 aaPredicted RBP18.13■□□□□ 0.49
CERS6-202ENST00000392687 SLC4A10Q6U841 1118 aa18.13■□□□□ 0.49
CERS6-202ENST00000392687 PNNQ9H307 717 aaKnown RBP18.13■□□□□ 0.49
CERS6-202ENST00000392687 WIZO95785 1651 aa18.13■□□□□ 0.49
CERS6-202ENST00000392687 TDRD9Q8NDG6 1382 aaKnown RBP18.13■□□□□ 0.49
CERS6-202ENST00000392687 CHMP4BQ9H444 224 aaKnown RBP18.13■□□□□ 0.49
CERS6-202ENST00000392687 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
CERS6-202ENST00000392687 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
CERS6-202ENST00000392687 RALBP1Q15311 655 aa18.12■□□□□ 0.49
CERS6-202ENST00000392687 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
CERS6-202ENST00000392687 GOLGA6L3A6NEY3 463 aa18.12■□□□□ 0.49
CERS6-202ENST00000392687 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
CERS6-202ENST00000392687 GBP4Q96PP9 640 aa18.11■□□□□ 0.49
CERS6-202ENST00000392687 DHX57Q6P158 1386 aaKnown RBP18.11■□□□□ 0.49
CERS6-202ENST00000392687 GOLGA6L6A8MZA4 724 aa18.11■□□□□ 0.49
CERS6-202ENST00000392687 CRBNQ96SW2 442 aa18.1■□□□□ 0.49
CERS6-202ENST00000392687 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
CERS6-202ENST00000392687 KANK1Q14678 1352 aa18.09■□□□□ 0.49
CERS6-202ENST00000392687 NACADO15069 1562 aa18.09■□□□□ 0.49
CERS6-202ENST00000392687 PDE4AP27815 886 aa18.09■□□□□ 0.49
CERS6-202ENST00000392687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.492e-6■■■□□ 17.2
CERS6-202ENST00000392687 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
CERS6-202ENST00000392687 IPO8O15397 1037 aaKnown RBP18.08■□□□□ 0.48
CERS6-202ENST00000392687 NCBP3Q53F19 620 aaKnown RBP18.08■□□□□ 0.48
CERS6-202ENST00000392687 ISY1Q9ULR0 285 aaKnown RBP18.08■□□□□ 0.48
CERS6-202ENST00000392687 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
CERS6-202ENST00000392687 PANK3Q9H999 370 aa18.06■□□□□ 0.48
CERS6-202ENST00000392687 CCDC9Q9Y3X0 531 aaKnown RBP18.06■□□□□ 0.48
CERS6-202ENST00000392687 HDGFL2Q7Z4V5 671 aaPredicted RBP18.06■□□□□ 0.48
CERS6-202ENST00000392687 CENPJQ9HC77 1338 aaPredicted RBP18.05■□□□□ 0.48
CERS6-202ENST00000392687 GNL2Q13823 731 aaKnown RBP18.05■□□□□ 0.48
CERS6-202ENST00000392687 TRAK1Q9UPV9 953 aa18.05■□□□□ 0.48
CERS6-202ENST00000392687 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
CERS6-202ENST00000392687 LTV1Q96GA3 475 aaPredicted RBP18.04■□□□□ 0.48
CERS6-202ENST00000392687 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
CERS6-202ENST00000392687 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
CERS6-202ENST00000392687 COG6Q9Y2V7 657 aa18.02■□□□□ 0.48
CERS6-202ENST00000392687 KIF3BO15066 747 aa18.02■□□□□ 0.47
CERS6-202ENST00000392687 HSP90B1P14625 803 aaKnown RBP18.02■□□□□ 0.47
CERS6-202ENST00000392687 CLSTN1O94985 981 aa18.01■□□□□ 0.47
CERS6-202ENST00000392687 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
CERS6-202ENST00000392687 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
CERS6-202ENST00000392687 NRDCO43847 1150 aa18■□□□□ 0.47
CERS6-202ENST00000392687 KIAA2012Q0VF49 1180 aa18■□□□□ 0.47
CERS6-202ENST00000392687 RRP1P56182 461 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms