RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 SPAG9O60271 1321 aaKnown RBP5.05□□□□□ -1.6
UBR3-202ENST00000392632 TPM4P67936 248 aa5.05□□□□□ -1.6
UBR3-202ENST00000392632 ZNF330Q9Y3S2 320 aaPredicted RBP5.05□□□□□ -1.6
UBR3-202ENST00000392632 PAK3O75914 559 aaPredicted RBP5.05□□□□□ -1.6
UBR3-202ENST00000392632 CWC22Q9HCG8 908 aaKnown RBP5.05□□□□□ -1.6
UBR3-202ENST00000392632 NEUROD2Q15784 382 aa5.04□□□□□ -1.6
UBR3-202ENST00000392632 STK31Q9BXU1 1019 aa5.04□□□□□ -1.6
UBR3-202ENST00000392632 HSP90AB1P08238 724 aaKnown RBP5.04□□□□□ -1.6
UBR3-202ENST00000392632 AMOTL1Q8IY63 956 aa5.04□□□□□ -1.6
UBR3-202ENST00000392632 NOL10Q9BSC4 688 aaKnown RBP5.04□□□□□ -1.6
UBR3-202ENST00000392632 LRRFIP1Q32MZ4 808 aaKnown RBP5.04□□□□□ -1.6
UBR3-202ENST00000392632 TCEAL9Q9UHQ7 104 aa5.04□□□□□ -1.6
UBR3-202ENST00000392632 RASSF8Q8NHQ8 419 aa5.03□□□□□ -1.6
UBR3-202ENST00000392632 TRIM34Q9BYJ4 488 aa5.03□□□□□ -1.6
UBR3-202ENST00000392632 SCRIBQ14160 1630 aa5.03□□□□□ -1.6
UBR3-202ENST00000392632 PTMSP20962 102 aa5.03□□□□□ -1.6
UBR3-202ENST00000392632 MORC1Q86VD1 984 aa5.03□□□□□ -1.6
UBR3-202ENST00000392632 HMMRO75330 724 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 EFCAB2Q5VUJ9 269 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 WWC1Q8IX03 1113 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 CLIP1P30622 1438 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 MEX3CQ5U5Q3 659 aaKnown RBP5.02□□□□□ -1.61
UBR3-202ENST00000392632 SOX12O15370 315 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 MSH5O43196 834 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 LMOD3Q0VAK6 560 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 GGT6Q6P531 493 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 SMC4Q9NTJ3 1288 aa5.02□□□□□ -1.61
UBR3-202ENST00000392632 A0A0U1RQG5 324 aaPredicted RBP5.02□□□□□ -1.61
UBR3-202ENST00000392632 FRAT1Q92837 279 aaPredicted RBP5.02□□□□□ -1.61
UBR3-202ENST00000392632 HSCBQ8IWL3 235 aa5.01□□□□□ -1.61
UBR3-202ENST00000392632 EEA1Q15075 1411 aa5.01□□□□□ -1.61
UBR3-202ENST00000392632 CCNB3Q8WWL7 1395 aa5.01□□□□□ -1.61
UBR3-202ENST00000392632 VPS53Q5VIR6 699 aa5.01□□□□□ -1.61
UBR3-202ENST00000392632 NGDNQ8NEJ9 315 aaKnown RBP5.01□□□□□ -1.61
UBR3-202ENST00000392632 CSPP1Q1MSJ5 1256 aa5.01□□□□□ -1.61
UBR3-202ENST00000392632 TERF2IPQ9NYB0 399 aa5.01□□□□□ -1.61
UBR3-202ENST00000392632 DRC7Q8IY82 874 aa5.01□□□□□ -1.61
UBR3-202ENST00000392632 TPM3P06753 285 aa5□□□□□ -1.61
UBR3-202ENST00000392632 R3HCC1Q9Y3T6 440 aaKnown RBP5□□□□□ -1.61
UBR3-202ENST00000392632 CARMIL2Q6F5E8 1435 aa5□□□□□ -1.61
UBR3-202ENST00000392632 EVA1CP58658 441 aa5□□□□□ -1.61
UBR3-202ENST00000392632 SF3B2Q13435 895 aaKnown RBP5□□□□□ -1.61
UBR3-202ENST00000392632 SYAP1Q96A49 352 aaPredicted RBP5□□□□□ -1.61
UBR3-202ENST00000392632 CPLX2Q6PUV4 134 aaKnown RBP5□□□□□ -1.61
UBR3-202ENST00000392632 CHMP3Q9Y3E7 222 aa5□□□□□ -1.61
UBR3-202ENST00000392632 AKAP17AQ02040 695 aaKnown RBP4.99□□□□□ -1.61
UBR3-202ENST00000392632 CCDC47Q96A33 483 aaKnown RBP4.99□□□□□ -1.61
UBR3-202ENST00000392632 TPRNQ4KMQ1 711 aa4.99□□□□□ -1.61
UBR3-202ENST00000392632 KIF27Q86VH2 1401 aa4.99□□□□□ -1.61
UBR3-202ENST00000392632 TPM2P07951 284 aa4.99□□□□□ -1.61
UBR3-202ENST00000392632 TSR1Q2NL82 804 aaKnown RBP4.99□□□□□ -1.61
UBR3-202ENST00000392632 GOLGA6L1Q8N7Z2 621 aa4.99□□□□□ -1.61
UBR3-202ENST00000392632 TOMM22Q9NS69 142 aa4.99□□□□□ -1.61
UBR3-202ENST00000392632 HSP90B1P14625 803 aaKnown RBP4.98□□□□□ -1.61
UBR3-202ENST00000392632 AMPHP49418 695 aa4.98□□□□□ -1.61
UBR3-202ENST00000392632 RSPH4AQ5TD94 716 aa4.98□□□□□ -1.61
UBR3-202ENST00000392632 SYNE3Q6ZMZ3 975 aa4.98□□□□□ -1.61
UBR3-202ENST00000392632 CCDC43Q96MW1 224 aaKnown RBP4.98□□□□□ -1.61
UBR3-202ENST00000392632 NBR1Q14596 966 aa4.98□□□□□ -1.61
UBR3-202ENST00000392632 WWC2Q6AWC2 1192 aa4.97□□□□□ -1.61
UBR3-202ENST00000392632 WDHD1O75717 1129 aaPredicted RBP4.97□□□□□ -1.61
UBR3-202ENST00000392632 CCAR1Q8IX12 1150 aaKnown RBP4.97□□□□□ -1.61
UBR3-202ENST00000392632 EIF3AQ14152 1382 aaKnown RBP4.97□□□□□ -1.61
UBR3-202ENST00000392632 STK26Q9P289 416 aa4.97□□□□□ -1.61
UBR3-202ENST00000392632 TIMELESSQ9UNS1 1208 aa4.96□□□□□ -1.61
UBR3-202ENST00000392632 TPM1P09493 284 aa4.96□□□□□ -1.62
UBR3-202ENST00000392632 MSNP26038 577 aaKnown RBP4.96□□□□□ -1.62
UBR3-202ENST00000392632 RGS3P49796 1198 aa4.96□□□□□ -1.62
UBR3-202ENST00000392632 NEXNQ0ZGT2 675 aa4.96□□□□□ -1.62
UBR3-202ENST00000392632 C1orf141Q5JVX7 400 aa4.96□□□□□ -1.62
UBR3-202ENST00000392632 GBP4Q96PP9 640 aa4.96□□□□□ -1.62
UBR3-202ENST00000392632 FHAD1B1AJZ9 1412 aa4.96□□□□□ -1.62
UBR3-202ENST00000392632 SF3A1Q15459 793 aaKnown RBP4.96□□□□□ -1.62
UBR3-202ENST00000392632 RWDD1Q9H446 243 aaPredicted RBP4.96□□□□□ -1.62
UBR3-202ENST00000392632 U2AF1L5P0DN76 240 aaPredicted RBP4.95□□□□□ -1.62
UBR3-202ENST00000392632 U2AF1Q01081 240 aaKnown RBP eCLIP4.95□□□□□ -1.622e-6■■■■□ 19.7
UBR3-202ENST00000392632 TTC5Q8N0Z6 440 aa4.95□□□□□ -1.62
UBR3-202ENST00000392632 DCAF11Q8TEB1 546 aa4.95□□□□□ -1.62
UBR3-202ENST00000392632 IPO7O95373 1038 aaKnown RBP4.95□□□□□ -1.62
UBR3-202ENST00000392632 RDXP35241 583 aaKnown RBP4.95□□□□□ -1.62
UBR3-202ENST00000392632 CCDC70Q6NSX1 233 aa4.95□□□□□ -1.62
UBR3-202ENST00000392632 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.95□□□□□ -1.62
UBR3-202ENST00000392632 ZCCHC6Q5VYS8 1495 aaKnown RBP4.95□□□□□ -1.62
UBR3-202ENST00000392632 SAFB2Q14151 953 aaKnown RBP eCLIP4.95□□□□□ -1.62
UBR3-202ENST00000392632 KLHL34Q8N239 644 aa4.95□□□□□ -1.62
UBR3-202ENST00000392632 ANKRD20A12PQ8NF67 263 aa4.95□□□□□ -1.62
UBR3-202ENST00000392632 TEFQ10587 303 aa4.94□□□□□ -1.62
UBR3-202ENST00000392632 VPS37DQ86XT2 251 aa4.94□□□□□ -1.62
UBR3-202ENST00000392632 PAF1Q8N7H5 531 aa4.94□□□□□ -1.62
UBR3-202ENST00000392632 RBM33Q96EV2 1170 aaKnown RBP4.94□□□□□ -1.62
UBR3-202ENST00000392632 CEP162Q5TB80 1403 aa4.94□□□□□ -1.62
UBR3-202ENST00000392632 TPD52L1Q16890 204 aaPredicted RBP4.94□□□□□ -1.62
UBR3-202ENST00000392632 TCERG1O14776 1098 aaKnown RBP4.94□□□□□ -1.62
UBR3-202ENST00000392632 CCDC180Q9P1Z9 1646 aa4.94□□□□□ -1.62
UBR3-202ENST00000392632 CC2D1BQ5T0F9 858 aaKnown RBP4.94□□□□□ -1.62
UBR3-202ENST00000392632 KIF16BQ96L93 1317 aa4.93□□□□□ -1.62
UBR3-202ENST00000392632 WASHC2CQ9Y4E1 1318 aa4.93□□□□□ -1.62
UBR3-202ENST00000392632 DDX58O95786 925 aaKnown RBP4.93□□□□□ -1.62
UBR3-202ENST00000392632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.93□□□□□ -1.625e-6■■■■■ 121.1
UBR3-202ENST00000392632 PDE4CQ08493 712 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms