RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 CCDC18Q5T9S5 1454 aa8.03□□□□□ -1.12
TRAV16-201ENST00000390444 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
TRAV16-201ENST00000390444 SPDYE1Q8NFV5 336 aaPredicted RBP8.03□□□□□ -1.12
TRAV16-201ENST00000390444 CARMIL2Q6F5E8 1435 aa8.03□□□□□ -1.12
TRAV16-201ENST00000390444 TRIM26Q12899 539 aaPredicted RBP8.02□□□□□ -1.13
TRAV16-201ENST00000390444 EHBP1L1Q8N3D4 1523 aa8.01□□□□□ -1.13
TRAV16-201ENST00000390444 ABCA8O94911 1581 aa8.01□□□□□ -1.13
TRAV16-201ENST00000390444 LRRC9Q6ZRR7 1453 aa8□□□□□ -1.13
TRAV16-201ENST00000390444 SUPT6HQ7KZ85 1726 aaKnown RBP8□□□□□ -1.13
TRAV16-201ENST00000390444 EPRSP07814 1512 aaKnown RBP7.98□□□□□ -1.13
TRAV16-201ENST00000390444 P3H3Q8IVL6 736 aa7.98□□□□□ -1.13
TRAV16-201ENST00000390444 JPH4Q96JJ6 628 aa7.98□□□□□ -1.13
TRAV16-201ENST00000390444 ADCY10Q96PN6 1610 aa7.98□□□□□ -1.13
TRAV16-201ENST00000390444 NUP153P49790 1475 aaKnown RBP7.98□□□□□ -1.13
TRAV16-201ENST00000390444 PRG4Q92954 1404 aaPredicted RBP7.97□□□□□ -1.13
TRAV16-201ENST00000390444 ERCC6L2Q5T890 1561 aa7.97□□□□□ -1.13
TRAV16-201ENST00000390444 ARHGEF11O15085 1522 aa7.96□□□□□ -1.14
TRAV16-201ENST00000390444 MAGI3Q5TCQ9 1506 aa7.96□□□□□ -1.14
TRAV16-201ENST00000390444 RRBP1Q9P2E9 1410 aaKnown RBP7.95□□□□□ -1.14
TRAV16-201ENST00000390444 CDK13Q14004 1512 aaKnown RBP7.95□□□□□ -1.14
TRAV16-201ENST00000390444 RGL2O15211 777 aa7.95□□□□□ -1.14
TRAV16-201ENST00000390444 CIZ1Q9ULV3 898 aaPredicted RBP7.95□□□□□ -1.14
TRAV16-201ENST00000390444 PLB1Q6P1J6 1458 aa7.94□□□□□ -1.14
TRAV16-201ENST00000390444 KANK4Q5T7N3 995 aaPredicted RBP7.94□□□□□ -1.14
TRAV16-201ENST00000390444 PPARGC1BQ86YN6 1023 aaKnown RBP7.94□□□□□ -1.14
TRAV16-201ENST00000390444 REM2Q8IYK8 340 aaPredicted RBP7.94□□□□□ -1.14
TRAV16-201ENST00000390444 PCGF6Q9BYE7 350 aa7.94□□□□□ -1.14
TRAV16-201ENST00000390444 ITSN2Q9NZM3 1697 aa7.94□□□□□ -1.14
TRAV16-201ENST00000390444 ABCC2Q92887 1545 aa7.93□□□□□ -1.14
TRAV16-201ENST00000390444 CLEC11AQ9Y240 323 aa7.93□□□□□ -1.14
TRAV16-201ENST00000390444 UHRF1BP1LA0JNW5 1464 aa7.93□□□□□ -1.14
TRAV16-201ENST00000390444 PTPRGP23470 1445 aa7.92□□□□□ -1.14
TRAV16-201ENST00000390444 PRR29P0C7W0 189 aa7.91□□□□□ -1.14
TRAV16-201ENST00000390444 BBXQ8WY36 941 aaPredicted RBP7.91□□□□□ -1.14
TRAV16-201ENST00000390444 MTUS2Q5JR59 1369 aa7.91□□□□□ -1.14
TRAV16-201ENST00000390444 NCOA2Q15596 1464 aa7.91□□□□□ -1.14
TRAV16-201ENST00000390444 KIF14Q15058 1648 aa7.91□□□□□ -1.14
TRAV16-201ENST00000390444 ZCCHC11Q5TAX3 1644 aaKnown RBP7.91□□□□□ -1.14
TRAV16-201ENST00000390444 CDC42BPAQ5VT25 1732 aa7.9□□□□□ -1.14
TRAV16-201ENST00000390444 UACAQ9BZF9 1416 aa7.9□□□□□ -1.14
TRAV16-201ENST00000390444 GSE1Q14687 1217 aa7.9□□□□□ -1.14
TRAV16-201ENST00000390444 CREBZFQ9NS37 354 aa7.9□□□□□ -1.14
TRAV16-201ENST00000390444 TROQ12816 1431 aaPredicted RBP7.89□□□□□ -1.15
TRAV16-201ENST00000390444 PHLDB1Q86UU1 1377 aa7.89□□□□□ -1.15
TRAV16-201ENST00000390444 NUBP1P53384 320 aa7.89□□□□□ -1.15
TRAV16-201ENST00000390444 HAP1P54257 671 aaPredicted RBP7.89□□□□□ -1.15
TRAV16-201ENST00000390444 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.89□□□□□ -1.15
TRAV16-201ENST00000390444 PTPN23Q9H3S7 1636 aa7.89□□□□□ -1.15
TRAV16-201ENST00000390444 ATP10BO94823 1461 aa7.88□□□□□ -1.15
TRAV16-201ENST00000390444 MYOM3Q5VTT5 1437 aa7.88□□□□□ -1.15
TRAV16-201ENST00000390444 CCNB3Q8WWL7 1395 aa7.88□□□□□ -1.15
TRAV16-201ENST00000390444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.88□□□□□ -1.15
TRAV16-201ENST00000390444 TTBK1Q5TCY1 1321 aaPredicted RBP7.88□□□□□ -1.15
TRAV16-201ENST00000390444 PITPNM1O00562 1244 aa7.88□□□□□ -1.15
TRAV16-201ENST00000390444 KDM5BQ9UGL1 1544 aa7.88□□□□□ -1.15
TRAV16-201ENST00000390444 FGD6Q6ZV73 1430 aa7.87□□□□□ -1.15
TRAV16-201ENST00000390444 NPM1P06748 294 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRAV16-201ENST00000390444 ATP1B4Q9UN42 357 aaPredicted RBP7.87□□□□□ -1.15
TRAV16-201ENST00000390444 TCOF1Q13428 1488 aaKnown RBP7.87□□□□□ -1.15
TRAV16-201ENST00000390444 MYO5CQ9NQX4 1742 aa7.86□□□□□ -1.15
TRAV16-201ENST00000390444 PREX2Q70Z35 1606 aa7.86□□□□□ -1.15
TRAV16-201ENST00000390444 MNX1P50219 401 aaPredicted RBP7.86□□□□□ -1.15
TRAV16-201ENST00000390444 FAM212AQ96EL1 285 aa7.86□□□□□ -1.15
TRAV16-201ENST00000390444 MIA2Q96PC5 1412 aa7.86□□□□□ -1.15
TRAV16-201ENST00000390444 CROCC2H7BZ55 1655 aa7.86□□□□□ -1.15
TRAV16-201ENST00000390444 CDK11AQ9UQ88 783 aaPredicted RBP7.85□□□□□ -1.15
TRAV16-201ENST00000390444 CDC42BPBQ9Y5S2 1711 aa7.85□□□□□ -1.15
TRAV16-201ENST00000390444 ABCC10Q5T3U5 1492 aa7.85□□□□□ -1.15
TRAV16-201ENST00000390444 RIMBP3CA6NJZ7 1639 aa7.84□□□□□ -1.15
TRAV16-201ENST00000390444 RIMBP3BA6NNM3 1639 aa7.84□□□□□ -1.15
TRAV16-201ENST00000390444 DNMT1P26358 1616 aaKnown RBP7.84□□□□□ -1.15
TRAV16-201ENST00000390444 RIMBP3Q9UFD9 1639 aa7.84□□□□□ -1.15
TRAV16-201ENST00000390444 GCC2Q8IWJ2 1684 aa7.83□□□□□ -1.16
TRAV16-201ENST00000390444 ADGBQ8N7X0 1667 aa7.83□□□□□ -1.16
TRAV16-201ENST00000390444 RNF25Q96BH1 459 aaPredicted RBP7.83□□□□□ -1.16
TRAV16-201ENST00000390444 TTC37Q6PGP7 1564 aa7.83□□□□□ -1.16
TRAV16-201ENST00000390444 CHGAP10645 457 aaKnown RBP7.82□□□□□ -1.16
TRAV16-201ENST00000390444 HS6ST3Q8IZP7 471 aa7.82□□□□□ -1.16
TRAV16-201ENST00000390444 DCAF8Q5TAQ9 597 aa7.81□□□□□ -1.16
TRAV16-201ENST00000390444 PAXIP1Q6ZW49 1069 aaPredicted RBP7.81□□□□□ -1.16
TRAV16-201ENST00000390444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.81□□□□□ -1.16
TRAV16-201ENST00000390444 ARAP3Q8WWN8 1544 aa7.81□□□□□ -1.16
TRAV16-201ENST00000390444 GPATCH8Q9UKJ3 1502 aaKnown RBP7.81□□□□□ -1.16
TRAV16-201ENST00000390444 ABCA9Q8IUA7 1624 aa7.8□□□□□ -1.16
TRAV16-201ENST00000390444 AKNAQ7Z591 1439 aa7.79□□□□□ -1.16
TRAV16-201ENST00000390444 ARID3CA6NKF2 412 aa7.79□□□□□ -1.16
TRAV16-201ENST00000390444 RIOK3O14730 519 aaKnown RBP7.79□□□□□ -1.16
TRAV16-201ENST00000390444 RASEFQ8IZ41 740 aa7.79□□□□□ -1.16
TRAV16-201ENST00000390444 TAOK2Q9UL54 1235 aa7.79□□□□□ -1.16
TRAV16-201ENST00000390444 CAMSAP2Q08AD1 1489 aa7.79□□□□□ -1.16
TRAV16-201ENST00000390444 WDR7Q9Y4E6 1490 aa7.79□□□□□ -1.16
TRAV16-201ENST00000390444 ARHGEF5Q12774 1597 aa7.79□□□□□ -1.16
TRAV16-201ENST00000390444 PLEKHD1A6NEE1 506 aa7.78□□□□□ -1.16
TRAV16-201ENST00000390444 VSIG10Q8N0Z9 540 aa7.78□□□□□ -1.16
TRAV16-201ENST00000390444 CFAP44Q96MT7 982 aa7.78□□□□□ -1.16
TRAV16-201ENST00000390444 SAMD9LQ8IVG5 1584 aa7.78□□□□□ -1.16
TRAV16-201ENST00000390444 MAPKBP1O60336 1514 aa7.78□□□□□ -1.16
TRAV16-201ENST00000390444 SPRYD3Q8NCJ5 442 aa7.77□□□□□ -1.17
TRAV16-201ENST00000390444 SHANK2Q9UPX8 1470 aa7.76□□□□□ -1.17
TRAV16-201ENST00000390444 DNAJC5Q9H3Z4 198 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms