RNA–Protein interactions for RNA: ENST00000390437.2

TRAV12-2-201, Transcript of T cell receptor alpha variable 12-2, humanhuman

APPRIS P1 BASIC

Gene TRAV12-2, Length 445 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-2-201ENST00000390437 PKD2Q13563 968 aa9.2□□□□□ -0.94
TRAV12-2-201ENST00000390437 PDS5BQ9NTI5 1447 aa9.2□□□□□ -0.94
TRAV12-2-201ENST00000390437 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
TRAV12-2-201ENST00000390437 SMARCA2P51531 1590 aa9.17□□□□□ -0.94
TRAV12-2-201ENST00000390437 BCL11BQ9C0K0 894 aaPredicted RBP9.16□□□□□ -0.94
TRAV12-2-201ENST00000390437 CYB5RLQ6IPT4 315 aa9.15□□□□□ -0.94
TRAV12-2-201ENST00000390437 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
TRAV12-2-201ENST00000390437 PHF8Q9UPP1 1060 aa9.15□□□□□ -0.94
TRAV12-2-201ENST00000390437 MS4A4AQ96JQ5 239 aa9.14□□□□□ -0.95
TRAV12-2-201ENST00000390437 STK24Q9Y6E0 443 aa9.14□□□□□ -0.95
TRAV12-2-201ENST00000390437 RGL2O15211 777 aa9.13□□□□□ -0.95
TRAV12-2-201ENST00000390437 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
TRAV12-2-201ENST00000390437 BAZ1BQ9UIG0 1483 aaKnown RBP9.13□□□□□ -0.95
TRAV12-2-201ENST00000390437 STK25O00506 426 aa9.12□□□□□ -0.95
TRAV12-2-201ENST00000390437 NLRP6P59044 892 aa9.12□□□□□ -0.95
TRAV12-2-201ENST00000390437 MICALL2Q8IY33 904 aa9.12□□□□□ -0.95
TRAV12-2-201ENST00000390437 CDAN1Q8IWY9 1227 aa9.1□□□□□ -0.95
TRAV12-2-201ENST00000390437 FBXO22Q8NEZ5 403 aa9.1□□□□□ -0.95
TRAV12-2-201ENST00000390437 THOC2Q8NI27 1593 aaKnown RBP9.07□□□□□ -0.96
TRAV12-2-201ENST00000390437 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
TRAV12-2-201ENST00000390437 MFRPQ9BY79 579 aa9.07□□□□□ -0.96
TRAV12-2-201ENST00000390437 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
TRAV12-2-201ENST00000390437 MARVELD3Q96A59 401 aa9.06□□□□□ -0.96
TRAV12-2-201ENST00000390437 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
TRAV12-2-201ENST00000390437 CADPSQ9ULU8 1353 aa9.05□□□□□ -0.96
TRAV12-2-201ENST00000390437 RTN4Q9NQC3 1192 aaKnown RBP9.05□□□□□ -0.96
TRAV12-2-201ENST00000390437 MRC2Q9UBG0 1479 aa9.04□□□□□ -0.96
TRAV12-2-201ENST00000390437 DOK7Q18PE1 504 aa9.04□□□□□ -0.96
TRAV12-2-201ENST00000390437 TMEM92Q6UXU6 159 aa9.04□□□□□ -0.96
TRAV12-2-201ENST00000390437 EMP3P54852 163 aa9.02□□□□□ -0.97
TRAV12-2-201ENST00000390437 BAZ1AQ9NRL2 1556 aaPredicted RBP9.02□□□□□ -0.97
TRAV12-2-201ENST00000390437 ZNF710Q8N1W2 664 aa9.01□□□□□ -0.97
TRAV12-2-201ENST00000390437 KIF21AQ7Z4S6 1674 aa9□□□□□ -0.97
TRAV12-2-201ENST00000390437 HOXB1P14653 301 aaPredicted RBP9□□□□□ -0.97
TRAV12-2-201ENST00000390437 SMARCA4P51532 1647 aa9□□□□□ -0.97
TRAV12-2-201ENST00000390437 RIMBP2O15034 1052 aa8.99□□□□□ -0.97
TRAV12-2-201ENST00000390437 ZSWIM6Q9HCJ5 1215 aa8.98□□□□□ -0.97
TRAV12-2-201ENST00000390437 HS6ST3Q8IZP7 471 aa8.97□□□□□ -0.97
TRAV12-2-201ENST00000390437 FAM205CA6NFA0 338 aa8.96□□□□□ -0.98
TRAV12-2-201ENST00000390437 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.98
TRAV12-2-201ENST00000390437 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.98
TRAV12-2-201ENST00000390437 POTEB3A0JP26 581 aa8.95□□□□□ -0.98
TRAV12-2-201ENST00000390437 POTEBQ6S5H4 581 aa8.95□□□□□ -0.98
TRAV12-2-201ENST00000390437 KIF3CO14782 793 aa8.94□□□□□ -0.98
TRAV12-2-201ENST00000390437 WDR62O43379 1518 aa8.93□□□□□ -0.98
TRAV12-2-201ENST00000390437 RIMBP3CA6NJZ7 1639 aa8.93□□□□□ -0.98
TRAV12-2-201ENST00000390437 RIMBP3BA6NNM3 1639 aa8.93□□□□□ -0.98
TRAV12-2-201ENST00000390437 RIMBP3Q9UFD9 1639 aa8.93□□□□□ -0.98
TRAV12-2-201ENST00000390437 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
TRAV12-2-201ENST00000390437 GPR153Q6NV75 609 aa8.92□□□□□ -0.98
TRAV12-2-201ENST00000390437 ERBB3P21860 1342 aa8.9□□□□□ -0.98
TRAV12-2-201ENST00000390437 C2orf72A6NCS6 295 aa8.9□□□□□ -0.98
TRAV12-2-201ENST00000390437 PPP1R37O75864 691 aa8.9□□□□□ -0.98
TRAV12-2-201ENST00000390437 CHGAP10645 457 aaKnown RBP8.9□□□□□ -0.98
TRAV12-2-201ENST00000390437 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
TRAV12-2-201ENST00000390437 ARHGEF11O15085 1522 aa8.89□□□□□ -0.99
TRAV12-2-201ENST00000390437 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
TRAV12-2-201ENST00000390437 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
TRAV12-2-201ENST00000390437 MROH2BQ7Z745 1585 aa8.86□□□□□ -0.99
TRAV12-2-201ENST00000390437 TMC2Q8TDI7 906 aa8.86□□□□□ -0.99
TRAV12-2-201ENST00000390437 SLC34A2O95436 690 aa8.85□□□□□ -0.99
TRAV12-2-201ENST00000390437 ARSIQ5FYB1 569 aa8.85□□□□□ -0.99
TRAV12-2-201ENST00000390437 MMRN1Q13201 1228 aa8.84□□□□□ -0.99
TRAV12-2-201ENST00000390437 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
TRAV12-2-201ENST00000390437 RYDENQ9NUL5 291 aaKnown RBP8.84□□□□□ -0.99
TRAV12-2-201ENST00000390437 PEG3Q9GZU2 1588 aa8.83□□□□□ -1
TRAV12-2-201ENST00000390437 NKX1-1Q15270 411 aaPredicted RBP8.83□□□□□ -1
TRAV12-2-201ENST00000390437 CHMP7Q8WUX9 453 aaPredicted RBP8.83□□□□□ -1
TRAV12-2-201ENST00000390437 ZNF687Q8N1G0 1237 aa8.82□□□□□ -1
TRAV12-2-201ENST00000390437 URB2Q14146 1524 aaKnown RBP8.8□□□□□ -1
TRAV12-2-201ENST00000390437 ZNF316A6NFI3 1004 aaPredicted RBP8.79□□□□□ -1
TRAV12-2-201ENST00000390437 FOXK1P85037 733 aa8.79□□□□□ -1
TRAV12-2-201ENST00000390437 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -1
TRAV12-2-201ENST00000390437 GPHNQ9NQX3 736 aaPredicted RBP8.79□□□□□ -1
TRAV12-2-201ENST00000390437 ZNF608Q9ULD9 1512 aaPredicted RBP8.79□□□□□ -1
TRAV12-2-201ENST00000390437 IFT140Q96RY7 1462 aa8.78□□□□□ -1
TRAV12-2-201ENST00000390437 PCDHGA4Q9Y5G9 962 aa8.78□□□□□ -1
TRAV12-2-201ENST00000390437 CFTRP13569 1480 aa8.77□□□□□ -1
TRAV12-2-201ENST00000390437 ARAP1Q96P48 1450 aa8.77□□□□□ -1.01
TRAV12-2-201ENST00000390437 AQRO60306 1485 aaKnown RBP eCLIP8.76□□□□□ -1.01
TRAV12-2-201ENST00000390437 NUDT7P0C024 238 aa8.75□□□□□ -1.01
TRAV12-2-201ENST00000390437 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
TRAV12-2-201ENST00000390437 PLPP6Q8IY26 295 aa8.74□□□□□ -1.01
TRAV12-2-201ENST00000390437 DSG2Q14126 1118 aa8.73□□□□□ -1.01
TRAV12-2-201ENST00000390437 RSF1Q96T23 1441 aaPredicted RBP8.72□□□□□ -1.01
TRAV12-2-201ENST00000390437 WIZO95785 1651 aa8.72□□□□□ -1.01
TRAV12-2-201ENST00000390437 GTPBP6O43824 516 aaPredicted RBP8.72□□□□□ -1.01
TRAV12-2-201ENST00000390437 LHX6Q9UPM6 363 aa8.71□□□□□ -1.02
TRAV12-2-201ENST00000390437 KDM4FA0A1W2PPD8 638 aa8.7□□□□□ -1.02
TRAV12-2-201ENST00000390437 CRISPLD2Q9H0B8 497 aa8.7□□□□□ -1.02
TRAV12-2-201ENST00000390437 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
TRAV12-2-201ENST00000390437 TDRD9Q8NDG6 1382 aaKnown RBP8.69□□□□□ -1.02
TRAV12-2-201ENST00000390437 TBC1D12O60347 775 aa8.68□□□□□ -1.02
TRAV12-2-201ENST00000390437 PBX2P40425 430 aa8.68□□□□□ -1.02
TRAV12-2-201ENST00000390437 ABCC8Q09428 1581 aa8.68□□□□□ -1.02
TRAV12-2-201ENST00000390437 PDE4AP27815 886 aa8.67□□□□□ -1.02
TRAV12-2-201ENST00000390437 PTGER2P43116 358 aa8.66□□□□□ -1.02
TRAV12-2-201ENST00000390437 TOPBP1Q92547 1522 aa8.65□□□□□ -1.02
TRAV12-2-201ENST00000390437 NCKAP5LQ9HCH0 1330 aa8.65□□□□□ -1.02
TRAV12-2-201ENST00000390437 SOGA1O94964 1423 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms