RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
ERCC4-202ENST00000389138 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
ERCC4-202ENST00000389138 GABBR2O75899 941 aa9.09□□□□□ -0.95
ERCC4-202ENST00000389138 CHGAP10645 457 aaKnown RBP9.09□□□□□ -0.95
ERCC4-202ENST00000389138 TIE1P35590 1138 aa9.08□□□□□ -0.96
ERCC4-202ENST00000389138 STK25O00506 426 aa9.07□□□□□ -0.96
ERCC4-202ENST00000389138 GALR2O43603 387 aaPredicted RBP9.07□□□□□ -0.96
ERCC4-202ENST00000389138 ZBTB7CA1YPR0 619 aa9.07□□□□□ -0.96
ERCC4-202ENST00000389138 SMARCA4P51532 1647 aa9.06□□□□□ -0.96
ERCC4-202ENST00000389138 RSPH6AQ9H0K4 717 aa9.05□□□□□ -0.96
ERCC4-202ENST00000389138 BCL11BQ9C0K0 894 aaPredicted RBP9.05□□□□□ -0.96
ERCC4-202ENST00000389138 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
ERCC4-202ENST00000389138 RIMBP3CA6NJZ7 1639 aa9.04□□□□□ -0.96
ERCC4-202ENST00000389138 RIMBP3BA6NNM3 1639 aa9.04□□□□□ -0.96
ERCC4-202ENST00000389138 RIMBP3Q9UFD9 1639 aa9.04□□□□□ -0.96
ERCC4-202ENST00000389138 NEUROD2Q15784 382 aa9.03□□□□□ -0.96
ERCC4-202ENST00000389138 TMEM106CQ9BVX2 250 aa9.03□□□□□ -0.96
ERCC4-202ENST00000389138 WDR62O43379 1518 aa9.03□□□□□ -0.96
ERCC4-202ENST00000389138 CHMP4AQ9BY43 222 aa9.01□□□□□ -0.97
ERCC4-202ENST00000389138 TRPC6Q9Y210 931 aa9.01□□□□□ -0.97
ERCC4-202ENST00000389138 BAZ1BQ9UIG0 1483 aaKnown RBP9.01□□□□□ -0.97
ERCC4-202ENST00000389138 PDS5BQ9NTI5 1447 aa9.01□□□□□ -0.97
ERCC4-202ENST00000389138 BMP2KQ9NSY1 1161 aaPredicted RBP9.01□□□□□ -0.97
ERCC4-202ENST00000389138 PDIA4P13667 645 aaKnown RBP9□□□□□ -0.97
ERCC4-202ENST00000389138 MRC2Q9UBG0 1479 aa9□□□□□ -0.97
ERCC4-202ENST00000389138 TTLL13PA6NNM8 815 aa8.99□□□□□ -0.97
ERCC4-202ENST00000389138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
ERCC4-202ENST00000389138 DCBLD2Q96PD2 775 aa8.99□□□□□ -0.97
ERCC4-202ENST00000389138 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
ERCC4-202ENST00000389138 LMOD2Q6P5Q4 547 aa8.99□□□□□ -0.97
ERCC4-202ENST00000389138 CDK11BP21127 795 aaKnown RBP8.98□□□□□ -0.97
ERCC4-202ENST00000389138 CDK11AQ9UQ88 783 aaPredicted RBP8.98□□□□□ -0.97
ERCC4-202ENST00000389138 PEG3Q9GZU2 1588 aa8.98□□□□□ -0.97
ERCC4-202ENST00000389138 ASTLQ6HA08 431 aaPredicted RBP8.98□□□□□ -0.97
ERCC4-202ENST00000389138 RYDENQ9NUL5 291 aaKnown RBP8.98□□□□□ -0.97
ERCC4-202ENST00000389138 ARID3CA6NKF2 412 aa8.97□□□□□ -0.97
ERCC4-202ENST00000389138 ATMINO43313 823 aaPredicted RBP8.97□□□□□ -0.97
ERCC4-202ENST00000389138 CABP2Q9NPB3 220 aa8.97□□□□□ -0.97
ERCC4-202ENST00000389138 SOX12O15370 315 aa8.96□□□□□ -0.98
ERCC4-202ENST00000389138 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
ERCC4-202ENST00000389138 TRIM35Q9UPQ4 493 aa8.93□□□□□ -0.98
ERCC4-202ENST00000389138 ATN1P54259 1190 aaPredicted RBP8.93□□□□□ -0.98
ERCC4-202ENST00000389138 EFCAB3Q8N7B9 438 aa8.93□□□□□ -0.98
ERCC4-202ENST00000389138 HSP90B1P14625 803 aaKnown RBP8.92□□□□□ -0.98
ERCC4-202ENST00000389138 IER5LQ5T953 404 aa8.92□□□□□ -0.98
ERCC4-202ENST00000389138 ARHGEF11O15085 1522 aa8.92□□□□□ -0.98
ERCC4-202ENST00000389138 NLRP6P59044 892 aa8.91□□□□□ -0.98
ERCC4-202ENST00000389138 NKX1-1Q15270 411 aaPredicted RBP8.9□□□□□ -0.98
ERCC4-202ENST00000389138 ZNF428Q96B54 188 aa8.9□□□□□ -0.98
ERCC4-202ENST00000389138 KCTD17Q8N5Z5 321 aa8.89□□□□□ -0.99
ERCC4-202ENST00000389138 RGS22Q8NE09 1264 aa8.89□□□□□ -0.99
ERCC4-202ENST00000389138 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
ERCC4-202ENST00000389138 SLC39A7Q92504 469 aa8.89□□□□□ -0.99
ERCC4-202ENST00000389138 APBB1O00213 710 aa8.88□□□□□ -0.99
ERCC4-202ENST00000389138 RAD21O60216 631 aa8.87□□□□□ -0.99
ERCC4-202ENST00000389138 HMGB1P09429 215 aaKnown RBP8.87□□□□□ -0.99
ERCC4-202ENST00000389138 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
ERCC4-202ENST00000389138 CADPSQ9ULU8 1353 aa8.87□□□□□ -0.99
ERCC4-202ENST00000389138 PUS7Q96PZ0 661 aaKnown RBP8.87□□□□□ -0.99
ERCC4-202ENST00000389138 MFRPQ9BY79 579 aa8.87□□□□□ -0.99
ERCC4-202ENST00000389138 GTPBP6O43824 516 aaPredicted RBP8.86□□□□□ -0.99
ERCC4-202ENST00000389138 POTEIP0CG38 1075 aa8.86□□□□□ -0.99
ERCC4-202ENST00000389138 C7P10643 843 aa8.86□□□□□ -0.99
ERCC4-202ENST00000389138 ILDR1Q86SU0 546 aaPredicted RBP8.85□□□□□ -0.99
ERCC4-202ENST00000389138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.85□□□□□ -0.999e-6■□□□□ 9.4
ERCC4-202ENST00000389138 PHF8Q9UPP1 1060 aa8.85□□□□□ -0.99
ERCC4-202ENST00000389138 FBXO22Q8NEZ5 403 aa8.84□□□□□ -0.99
ERCC4-202ENST00000389138 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
ERCC4-202ENST00000389138 MTMR7Q9Y216 660 aa8.84□□□□□ -0.99
ERCC4-202ENST00000389138 IRX5P78411 483 aaPredicted RBP8.83□□□□□ -1
ERCC4-202ENST00000389138 OCEL1Q9H607 264 aa8.83□□□□□ -1
ERCC4-202ENST00000389138 PLCG2P16885 1265 aa8.81□□□□□ -1
ERCC4-202ENST00000389138 SEC24BO95487 1268 aa8.81□□□□□ -1
ERCC4-202ENST00000389138 DHX37Q8IY37 1157 aaKnown RBP8.81□□□□□ -1
ERCC4-202ENST00000389138 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
ERCC4-202ENST00000389138 MROH2BQ7Z745 1585 aa8.8□□□□□ -1
ERCC4-202ENST00000389138 ARAP1Q96P48 1450 aa8.8□□□□□ -1
ERCC4-202ENST00000389138 METRNQ9UJH8 293 aa8.8□□□□□ -1
ERCC4-202ENST00000389138 CHD1O14646 1710 aa8.79□□□□□ -1
ERCC4-202ENST00000389138 FOXD4L5Q5VV16 416 aaPredicted RBP8.78□□□□□ -1
ERCC4-202ENST00000389138 FOXD4L4Q8WXT5 416 aaPredicted RBP8.78□□□□□ -1
ERCC4-202ENST00000389138 MS4A4AQ96JQ5 239 aa8.78□□□□□ -1
ERCC4-202ENST00000389138 URB2Q14146 1524 aaKnown RBP8.78□□□□□ -1
ERCC4-202ENST00000389138 PRDM2Q13029 1718 aa8.77□□□□□ -1.01
ERCC4-202ENST00000389138 CYB5RLQ6IPT4 315 aa8.77□□□□□ -1.01
ERCC4-202ENST00000389138 PDCD7Q8N8D1 485 aaKnown RBP8.77□□□□□ -1.01
ERCC4-202ENST00000389138 RBM25P49756 843 aaKnown RBP8.76□□□□□ -1.01
ERCC4-202ENST00000389138 KCNV2Q8TDN2 545 aa8.76□□□□□ -1.01
ERCC4-202ENST00000389138 L3MBTL3Q96JM7 780 aaPredicted RBP8.76□□□□□ -1.01
ERCC4-202ENST00000389138 G3V3G9 751 aa8.74□□□□□ -1.01
ERCC4-202ENST00000389138 LHX8Q68G74 356 aa8.74□□□□□ -1.01
ERCC4-202ENST00000389138 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
ERCC4-202ENST00000389138 EIF4G3O43432 1585 aaKnown RBP8.73□□□□□ -1.01
ERCC4-202ENST00000389138 COLQQ9Y215 455 aaPredicted RBP8.73□□□□□ -1.01
ERCC4-202ENST00000389138 ZNF608Q9ULD9 1512 aaPredicted RBP8.73□□□□□ -1.01
ERCC4-202ENST00000389138 PPP1R37O75864 691 aa8.72□□□□□ -1.01
ERCC4-202ENST00000389138 P3H3Q8IVL6 736 aa8.72□□□□□ -1.01
ERCC4-202ENST00000389138 IL27Q8NEV9 243 aa8.72□□□□□ -1.01
ERCC4-202ENST00000389138 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
ERCC4-202ENST00000389138 WIZO95785 1651 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms