RNA–Protein interactions for RNA: ENST00000389093.7

PKM-203, Transcript of pyruvate kinase M1/2, humanhuman

TSL 5 BASIC

Gene PKM, Length 2,279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-203ENST00000389093 ABCC5O15440 1437 aa35.86■■■■□ 3.33
PKM-203ENST00000389093 CENPBP07199 599 aaPredicted RBP35.86■■■■□ 3.33
PKM-203ENST00000389093 CAMSAP2Q08AD1 1489 aa35.85■■■■□ 3.33
PKM-203ENST00000389093 CFDP1Q9UEE9 299 aaPredicted RBP35.82■■■■□ 3.32
PKM-203ENST00000389093 CDC42BPAQ5VT25 1732 aa35.8■■■■□ 3.32
PKM-203ENST00000389093 PLEKHD1A6NEE1 506 aa35.8■■■■□ 3.32
PKM-203ENST00000389093 MIER1Q8N108 512 aa35.8■■■■□ 3.32
PKM-203ENST00000389093 ERCC6L2Q5T890 1561 aa35.79■■■■□ 3.32
PKM-203ENST00000389093 TIMELESSQ9UNS1 1208 aa35.76■■■■□ 3.32
PKM-203ENST00000389093 ROCK1Q13464 1354 aa35.76■■■■□ 3.32
PKM-203ENST00000389093 ZNF777Q9ULD5 760 aaPredicted RBP35.74■■■■□ 3.31
PKM-203ENST00000389093 TRIM52Q96A61 297 aa35.74■■■■□ 3.31
PKM-203ENST00000389093 DENND4BO75064 1496 aaPredicted RBP35.73■■■■□ 3.31
PKM-203ENST00000389093 ABCC10Q5T3U5 1492 aa35.73■■■■□ 3.31
PKM-203ENST00000389093 CROCC2H7BZ55 1655 aa35.71■■■■□ 3.31
PKM-203ENST00000389093 TONSLQ96HA7 1378 aa35.68■■■■□ 3.3
PKM-203ENST00000389093 ADGBQ8N7X0 1667 aa35.68■■■■□ 3.3
PKM-203ENST00000389093 PPP1R15AO75807 674 aaPredicted RBP35.65■■■■□ 3.3
PKM-203ENST00000389093 CLASP1Q7Z460 1538 aa35.64■■■■□ 3.3
PKM-203ENST00000389093 MYT1Q01538 1121 aa35.61■■■■□ 3.29
PKM-203ENST00000389093 MPHOSPH9Q99550 1183 aa35.59■■■■□ 3.29
PKM-203ENST00000389093 NCOA1Q15788 1441 aa35.56■■■■□ 3.28
PKM-203ENST00000389093 ABCC2Q92887 1545 aa35.55■■■■□ 3.28
PKM-203ENST00000389093 GTF3C3Q9Y5Q9 886 aa35.55■■■■□ 3.28
PKM-203ENST00000389093 ADGRL2O95490 1459 aa35.53■■■■□ 3.28
PKM-203ENST00000389093 CDC42BPBQ9Y5S2 1711 aa35.52■■■■□ 3.28
PKM-203ENST00000389093 FOXD1Q16676 465 aa35.51■■■■□ 3.28
PKM-203ENST00000389093 KDM5BQ9UGL1 1544 aa35.5■■■■□ 3.27
PKM-203ENST00000389093 PREX2Q70Z35 1606 aa35.5■■■■□ 3.27
PKM-203ENST00000389093 YTHDC1Q96MU7 727 aaKnown RBP35.48■■■■□ 3.27
PKM-203ENST00000389093 TTC37Q6PGP7 1564 aa35.45■■■■□ 3.27
PKM-203ENST00000389093 ANKRD30AQ9BXX3 1397 aa35.44■■■■□ 3.26
PKM-203ENST00000389093 SAMD9LQ8IVG5 1584 aa35.42■■■■□ 3.26
PKM-203ENST00000389093 SHANK2Q9UPX8 1470 aa35.42■■■■□ 3.26
PKM-203ENST00000389093 C9orf84Q5VXU9 1444 aa35.42■■■■□ 3.26
PKM-203ENST00000389093 HIRIP3Q9BW71 556 aaPredicted RBP35.4■■■■□ 3.26
PKM-203ENST00000389093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.39■■■■□ 3.261e-7■■□□□ 11.8
PKM-203ENST00000389093 SLC4A1APQ9BWU0 796 aaKnown RBP35.39■■■■□ 3.26
PKM-203ENST00000389093 ZCCHC11Q5TAX3 1644 aaKnown RBP35.38■■■■□ 3.25
PKM-203ENST00000389093 HNRNPMP52272 730 aaKnown RBP eCLIP35.37■■■■□ 3.25
PKM-203ENST00000389093 PZPP20742 1482 aa35.37■■■■□ 3.25
PKM-203ENST00000389093 ARHGEF5Q12774 1597 aa35.37■■■■□ 3.25
PKM-203ENST00000389093 ANKRD30BQ9BXX2 1392 aa35.35■■■■□ 3.25
PKM-203ENST00000389093 MBD5Q9P267 1494 aa35.35■■■■□ 3.25
PKM-203ENST00000389093 ANKRD50Q9ULJ7 1429 aa35.34■■■■□ 3.25
PKM-203ENST00000389093 MYO5CQ9NQX4 1742 aa35.33■■■■□ 3.25
PKM-203ENST00000389093 ARHGAP5Q13017 1502 aa35.31■■■■□ 3.24
PKM-203ENST00000389093 TSPY4P0CV99 314 aa35.3■■■■□ 3.24
PKM-203ENST00000389093 TSPY10P0CW01 314 aa35.3■■■■□ 3.24
PKM-203ENST00000389093 UHRF1BP1LA0JNW5 1464 aa35.29■■■■□ 3.24
PKM-203ENST00000389093 RPRD2Q5VT52 1461 aaKnown RBP35.27■■■■□ 3.24
PKM-203ENST00000389093 CCDC141Q6ZP82 1450 aa35.27■■■■□ 3.24
PKM-203ENST00000389093 SYCP2Q9BX26 1530 aa35.27■■■■□ 3.24
PKM-203ENST00000389093 KCNH8Q96L42 1107 aa35.26■■■■□ 3.24
PKM-203ENST00000389093 DDX10Q13206 875 aaKnown RBP35.23■■■■□ 3.23
PKM-203ENST00000389093 L3MBTL2Q969R5 705 aa35.23■■■■□ 3.23
PKM-203ENST00000389093 KIF15Q9NS87 1388 aa35.22■■■■□ 3.23
PKM-203ENST00000389093 TEX14Q8IWB6 1497 aa35.18■■■■□ 3.22
PKM-203ENST00000389093 KIAA1107Q9UPP5 1409 aa35.16■■■■□ 3.22
PKM-203ENST00000389093 PKD2Q13563 968 aa35.13■■■■□ 3.21
PKM-203ENST00000389093 NUP155O75694 1391 aa35.13■■■■□ 3.21
PKM-203ENST00000389093 RSPH4AQ5TD94 716 aa35.1■■■■□ 3.21
PKM-203ENST00000389093 KDM5DQ9BY66 1539 aa35.09■■■■□ 3.21
PKM-203ENST00000389093 MAST1Q9Y2H9 1570 aa35.08■■■■□ 3.21
PKM-203ENST00000389093 PLCH2O75038 1416 aa35.06■■■■□ 3.2
PKM-203ENST00000389093 ARHGEF12Q9NZN5 1544 aa35.05■■■■□ 3.2
PKM-203ENST00000389093 PLEKHH2Q8IVE3 1493 aa35.05■■■■□ 3.2
PKM-203ENST00000389093 NBPF8Q3BBV2 869 aa35.01■■■■□ 3.19
PKM-203ENST00000389093 HSPA5P11021 654 aaKnown RBP35■■■■□ 3.19
PKM-203ENST00000389093 PLXNC1O60486 1568 aa34.98■■■■□ 3.19
PKM-203ENST00000389093 ABCC1P33527 1531 aa34.97■■■■□ 3.19
PKM-203ENST00000389093 WDR7Q9Y4E6 1490 aa34.95■■■■□ 3.19
PKM-203ENST00000389093 EFCAB2Q5VUJ9 269 aa34.94■■■■□ 3.18
PKM-203ENST00000389093 FAM135AQ9P2D6 1515 aa34.94■■■■□ 3.18
PKM-203ENST00000389093 EIF4G2P78344 907 aaKnown RBP eCLIP34.93■■■■□ 3.18
PKM-203ENST00000389093 UNC13BO14795 1591 aa34.9■■■■□ 3.18
PKM-203ENST00000389093 OSCARQ8IYS5 282 aa34.89■■■■□ 3.18
PKM-203ENST00000389093 TRAPPC8Q9Y2L5 1435 aa34.87■■■■□ 3.17
PKM-203ENST00000389093 WASHC2AQ641Q2 1341 aa34.85■■■■□ 3.17
PKM-203ENST00000389093 ARAP3Q8WWN8 1544 aa34.85■■■■□ 3.17
PKM-203ENST00000389093 DUOX2Q9NRD8 1548 aa34.84■■■■□ 3.17
PKM-203ENST00000389093 ABCA9Q8IUA7 1624 aa34.81■■■■□ 3.16
PKM-203ENST00000389093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.8■■■■□ 3.163e-16■□□□□ 9.7
PKM-203ENST00000389093 ANP32CO43423 234 aa34.79■■■■□ 3.16
PKM-203ENST00000389093 ZNF326Q5BKZ1 582 aaKnown RBP34.79■■■■□ 3.16
PKM-203ENST00000389093 ASXL2Q76L83 1435 aa34.78■■■■□ 3.16
PKM-203ENST00000389093 IQGAP3Q86VI3 1631 aa34.77■■■■□ 3.16
PKM-203ENST00000389093 ERBINQ96RT1 1412 aa34.75■■■■□ 3.15
PKM-203ENST00000389093 FANCAO15360 1455 aa34.74■■■■□ 3.15
PKM-203ENST00000389093 SPATA31E1Q6ZUB1 1445 aa34.74■■■■□ 3.15
PKM-203ENST00000389093 AFAP1Q8N556 730 aa34.72■■■■□ 3.15
PKM-203ENST00000389093 ZFYVE16Q7Z3T8 1539 aa34.72■■■■□ 3.15
PKM-203ENST00000389093 C11orf95C9JLR9 678 aaPredicted RBP34.72■■■■□ 3.15
PKM-203ENST00000389093 MAGI2Q86UL8 1455 aa34.7■■■■□ 3.15
PKM-203ENST00000389093 POLR1AO95602 1720 aaPredicted RBP34.7■■■■□ 3.14
PKM-203ENST00000389093 SPAG9O60271 1321 aaKnown RBP34.69■■■■□ 3.14
PKM-203ENST00000389093 CCDC7Q96M83 1385 aa34.65■■■■□ 3.14
PKM-203ENST00000389093 UHRF1BP1Q6BDS2 1440 aa34.65■■■■□ 3.14
PKM-203ENST00000389093 CCDC144AA2RUR9 1427 aa34.64■■■■□ 3.14
PKM-203ENST00000389093 PLA2R1Q13018 1463 aa34.63■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms