RNA–Protein interactions for RNA: ENST00000381105.2

FAM239C-201, Transcript of family with sequence similarity 239 member C, humanhuman

TSL 5 BASIC

Gene FAM239C, Length 2,118 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239C-201ENST00000381105 MAPKBP1O60336 1514 aa17.56■□□□□ 0.4
FAM239C-201ENST00000381105 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
FAM239C-201ENST00000381105 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
FAM239C-201ENST00000381105 ARHGAP5Q13017 1502 aa17.53■□□□□ 0.4
FAM239C-201ENST00000381105 PREX2Q70Z35 1606 aa17.52■□□□□ 0.39
FAM239C-201ENST00000381105 MIA2Q96PC5 1412 aa17.52■□□□□ 0.39
FAM239C-201ENST00000381105 CAMSAP2Q08AD1 1489 aa17.51■□□□□ 0.39
FAM239C-201ENST00000381105 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
FAM239C-201ENST00000381105 CDC42BPBQ9Y5S2 1711 aa17.51■□□□□ 0.39
FAM239C-201ENST00000381105 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
FAM239C-201ENST00000381105 ABCA9Q8IUA7 1624 aa17.5■□□□□ 0.39
FAM239C-201ENST00000381105 FAM69CQ0P6D2 419 aa17.5■□□□□ 0.39
FAM239C-201ENST00000381105 TCOF1Q13428 1488 aaKnown RBP17.49■□□□□ 0.39
FAM239C-201ENST00000381105 PLCH2O75038 1416 aa17.48■□□□□ 0.39
FAM239C-201ENST00000381105 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
FAM239C-201ENST00000381105 CHIC2Q9UKJ5 165 aa17.47■□□□□ 0.39
FAM239C-201ENST00000381105 CD109Q6YHK3 1445 aa17.47■□□□□ 0.39
FAM239C-201ENST00000381105 SAMD9LQ8IVG5 1584 aa17.47■□□□□ 0.39
FAM239C-201ENST00000381105 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.39
FAM239C-201ENST00000381105 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
FAM239C-201ENST00000381105 RTN4Q9NQC3 1192 aaKnown RBP17.46■□□□□ 0.39
FAM239C-201ENST00000381105 EFCAB2Q5VUJ9 269 aa17.44■□□□□ 0.38
FAM239C-201ENST00000381105 FANCAO15360 1455 aa17.43■□□□□ 0.38
FAM239C-201ENST00000381105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.43■□□□□ 0.38
FAM239C-201ENST00000381105 SYCP2Q9BX26 1530 aa17.43■□□□□ 0.38
FAM239C-201ENST00000381105 ABCC5O15440 1437 aa17.42■□□□□ 0.38
FAM239C-201ENST00000381105 DAPK1P53355 1430 aa17.41■□□□□ 0.38
FAM239C-201ENST00000381105 ARHGEF12Q9NZN5 1544 aa17.41■□□□□ 0.38
FAM239C-201ENST00000381105 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
FAM239C-201ENST00000381105 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.37
FAM239C-201ENST00000381105 TSPOAP1O95153 1857 aa17.39■□□□□ 0.37
FAM239C-201ENST00000381105 RRP7BPQ9NSQ0 103 aa17.39■□□□□ 0.37
FAM239C-201ENST00000381105 MBD5Q9P267 1494 aa17.38■□□□□ 0.37
FAM239C-201ENST00000381105 GLI2P10070 1586 aa17.38■□□□□ 0.37
FAM239C-201ENST00000381105 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
FAM239C-201ENST00000381105 ABCC1P33527 1531 aa17.37■□□□□ 0.37
FAM239C-201ENST00000381105 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
FAM239C-201ENST00000381105 ARAP3Q8WWN8 1544 aa17.36■□□□□ 0.37
FAM239C-201ENST00000381105 ADGRL1O94910 1474 aa17.36■□□□□ 0.37
FAM239C-201ENST00000381105 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
FAM239C-201ENST00000381105 AFAP1Q8N556 730 aa17.35■□□□□ 0.37
FAM239C-201ENST00000381105 AKNAQ7Z591 1439 aa17.35■□□□□ 0.37
FAM239C-201ENST00000381105 SCAPERQ9BY12 1400 aa17.34■□□□□ 0.37
FAM239C-201ENST00000381105 CCDC141Q6ZP82 1450 aa17.33■□□□□ 0.36
FAM239C-201ENST00000381105 C9orf84Q5VXU9 1444 aa17.32■□□□□ 0.36
FAM239C-201ENST00000381105 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
FAM239C-201ENST00000381105 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
FAM239C-201ENST00000381105 CROCC2H7BZ55 1655 aa17.31■□□□□ 0.36
FAM239C-201ENST00000381105 PPRC1Q5VV67 1664 aaKnown RBP17.31■□□□□ 0.36
FAM239C-201ENST00000381105 ARHGEF5Q12774 1597 aa17.31■□□□□ 0.36
FAM239C-201ENST00000381105 TSPY4P0CV99 314 aa17.3■□□□□ 0.36
FAM239C-201ENST00000381105 TSPY10P0CW01 314 aa17.3■□□□□ 0.36
FAM239C-201ENST00000381105 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
FAM239C-201ENST00000381105 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
FAM239C-201ENST00000381105 AMER1Q5JTC6 1135 aaPredicted RBP17.29■□□□□ 0.36
FAM239C-201ENST00000381105 NAIPQ13075 1403 aa17.28■□□□□ 0.36
FAM239C-201ENST00000381105 SETD5Q9C0A6 1442 aa17.28■□□□□ 0.36
FAM239C-201ENST00000381105 HFM1A2PYH4 1435 aa17.27■□□□□ 0.36
FAM239C-201ENST00000381105 MYT1LQ9UL68 1186 aa17.27■□□□□ 0.35
FAM239C-201ENST00000381105 CFAP74Q9C0B2 1584 aa17.27■□□□□ 0.35
FAM239C-201ENST00000381105 NEO1Q92859 1461 aa17.27■□□□□ 0.35
FAM239C-201ENST00000381105 KDM6BO15054 1643 aa17.26■□□□□ 0.35
FAM239C-201ENST00000381105 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
FAM239C-201ENST00000381105 SPAG9O60271 1321 aaKnown RBP17.25■□□□□ 0.35
FAM239C-201ENST00000381105 SHANK2Q9UPX8 1470 aa17.25■□□□□ 0.35
FAM239C-201ENST00000381105 ANKRD30AQ9BXX3 1397 aa17.24■□□□□ 0.35
FAM239C-201ENST00000381105 POGZQ7Z3K3 1410 aa17.24■□□□□ 0.35
FAM239C-201ENST00000381105 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
FAM239C-201ENST00000381105 RSPH4AQ5TD94 716 aa17.23■□□□□ 0.35
FAM239C-201ENST00000381105 ROCK1Q13464 1354 aa17.23■□□□□ 0.35
FAM239C-201ENST00000381105 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
FAM239C-201ENST00000381105 TEX14Q8IWB6 1497 aa17.22■□□□□ 0.35
FAM239C-201ENST00000381105 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
FAM239C-201ENST00000381105 DENND4BO75064 1496 aaPredicted RBP17.21■□□□□ 0.35
FAM239C-201ENST00000381105 ZNF518AQ6AHZ1 1483 aa17.21■□□□□ 0.35
FAM239C-201ENST00000381105 ZFYVE16Q7Z3T8 1539 aa17.21■□□□□ 0.34
FAM239C-201ENST00000381105 GCC2Q8IWJ2 1684 aa17.2■□□□□ 0.34
FAM239C-201ENST00000381105 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
FAM239C-201ENST00000381105 COL17A1Q9UMD9 1497 aaPredicted RBP17.19■□□□□ 0.34
FAM239C-201ENST00000381105 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
FAM239C-201ENST00000381105 ATP7AQ04656 1500 aa17.18■□□□□ 0.34
FAM239C-201ENST00000381105 FRMPD1Q5SYB0 1578 aa17.17■□□□□ 0.34
FAM239C-201ENST00000381105 INO80Q9ULG1 1556 aaPredicted RBP17.17■□□□□ 0.34
FAM239C-201ENST00000381105 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
FAM239C-201ENST00000381105 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
FAM239C-201ENST00000381105 KDM5CP41229 1560 aa17.16■□□□□ 0.34
FAM239C-201ENST00000381105 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
FAM239C-201ENST00000381105 KIDINS220Q9ULH0 1771 aa17.14■□□□□ 0.34
FAM239C-201ENST00000381105 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
FAM239C-201ENST00000381105 YEATS2Q9ULM3 1422 aa17.13■□□□□ 0.33
FAM239C-201ENST00000381105 HECW2Q9P2P5 1572 aa17.13■□□□□ 0.33
FAM239C-201ENST00000381105 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
FAM239C-201ENST00000381105 DHX57Q6P158 1386 aaKnown RBP17.12■□□□□ 0.33
FAM239C-201ENST00000381105 MLH3Q9UHC1 1453 aa17.1■□□□□ 0.33
FAM239C-201ENST00000381105 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
FAM239C-201ENST00000381105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
FAM239C-201ENST00000381105 DUOX2Q9NRD8 1548 aa17.09■□□□□ 0.33
FAM239C-201ENST00000381105 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
FAM239C-201ENST00000381105 HRCP23327 699 aa17.06■□□□□ 0.32
FAM239C-201ENST00000381105 FOXD1Q16676 465 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms