RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 HECW1Q76N89 1606 aa26.74■■□□□ 1.87
FOXC1-201ENST00000380874 ERICH6Q7L0X2 663 aa26.73■■□□□ 1.87
FOXC1-201ENST00000380874 NBPF8Q3BBV2 869 aa26.71■■□□□ 1.87
FOXC1-201ENST00000380874 PRG4Q92954 1404 aaPredicted RBP26.7■■□□□ 1.87
FOXC1-201ENST00000380874 RGL3Q3MIN7 710 aa26.7■■□□□ 1.86
FOXC1-201ENST00000380874 UGGT2Q9NYU1 1516 aa26.69■■□□□ 1.86
FOXC1-201ENST00000380874 CARMIL2Q6F5E8 1435 aa26.68■■□□□ 1.86
FOXC1-201ENST00000380874 MIA2Q96PC5 1412 aa26.67■■□□□ 1.86
FOXC1-201ENST00000380874 SAMD9Q5K651 1589 aa26.67■■□□□ 1.86
FOXC1-201ENST00000380874 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
FOXC1-201ENST00000380874 MAGI3Q5TCQ9 1506 aa26.67■■□□□ 1.86
FOXC1-201ENST00000380874 HNRNPMP52272 730 aaKnown RBP eCLIP26.67■■□□□ 1.86
FOXC1-201ENST00000380874 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
FOXC1-201ENST00000380874 CARD11Q9BXL7 1154 aa26.66■■□□□ 1.86
FOXC1-201ENST00000380874 CCDC184Q52MB2 194 aa26.64■■□□□ 1.86
FOXC1-201ENST00000380874 SALL2Q9Y467 1007 aaPredicted RBP26.64■■□□□ 1.86
FOXC1-201ENST00000380874 C11orf95C9JLR9 678 aaPredicted RBP26.64■■□□□ 1.85
FOXC1-201ENST00000380874 NUP155O75694 1391 aa26.64■■□□□ 1.85
FOXC1-201ENST00000380874 DAPK1P53355 1430 aa26.62■■□□□ 1.85
FOXC1-201ENST00000380874 TMC1Q8TDI8 760 aa26.61■■□□□ 1.85
FOXC1-201ENST00000380874 DCAF11Q8TEB1 546 aa26.61■■□□□ 1.85
FOXC1-201ENST00000380874 PRKRIP1Q9H875 184 aaPredicted RBP26.61■■□□□ 1.85
FOXC1-201ENST00000380874 KIAA0586Q9BVV6 1533 aa26.61■■□□□ 1.85
FOXC1-201ENST00000380874 ANKRD30AQ9BXX3 1397 aa26.6■■□□□ 1.85
FOXC1-201ENST00000380874 ABCC5O15440 1437 aa26.57■■□□□ 1.84
FOXC1-201ENST00000380874 CCDC7Q96M83 1385 aa26.56■■□□□ 1.84
FOXC1-201ENST00000380874 PLB1Q6P1J6 1458 aa26.56■■□□□ 1.84
FOXC1-201ENST00000380874 TARBP1Q13395 1621 aaKnown RBP26.56■■□□□ 1.84
FOXC1-201ENST00000380874 KIF7Q2M1P5 1343 aa26.54■■□□□ 1.84
FOXC1-201ENST00000380874 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
FOXC1-201ENST00000380874 GRIN2AQ12879 1464 aa26.52■■□□□ 1.84
FOXC1-201ENST00000380874 TROQ12816 1431 aaPredicted RBP26.5■■□□□ 1.83
FOXC1-201ENST00000380874 ANKRD30BQ9BXX2 1392 aa26.5■■□□□ 1.83
FOXC1-201ENST00000380874 RBM19Q9Y4C8 960 aaKnown RBP26.49■■□□□ 1.83
FOXC1-201ENST00000380874 CNTLNQ9NXG0 1405 aa26.49■■□□□ 1.83
FOXC1-201ENST00000380874 B4GALNT3Q6L9W6 998 aa26.48■■□□□ 1.83
FOXC1-201ENST00000380874 NUP153P49790 1475 aaKnown RBP26.47■■□□□ 1.83
FOXC1-201ENST00000380874 TCOF1Q13428 1488 aaKnown RBP26.47■■□□□ 1.83
FOXC1-201ENST00000380874 WDR62O43379 1518 aa26.47■■□□□ 1.83
FOXC1-201ENST00000380874 PBRM1Q86U86 1689 aa26.46■■□□□ 1.83
FOXC1-201ENST00000380874 USP47Q96K76 1375 aa26.44■■□□□ 1.82
FOXC1-201ENST00000380874 ROCK1Q13464 1354 aa26.43■■□□□ 1.82
FOXC1-201ENST00000380874 ANKRD50Q9ULJ7 1429 aa26.43■■□□□ 1.82
FOXC1-201ENST00000380874 KDM6BO15054 1643 aa26.42■■□□□ 1.82
FOXC1-201ENST00000380874 ST20-MTHFSA0A0A6YYL1 179 aa26.4■■□□□ 1.82
FOXC1-201ENST00000380874 LRRIQ1Q96JM4 1722 aa26.4■■□□□ 1.82
FOXC1-201ENST00000380874 PTPRGP23470 1445 aa26.4■■□□□ 1.82
FOXC1-201ENST00000380874 DISP1Q96F81 1524 aa26.39■■□□□ 1.82
FOXC1-201ENST00000380874 AKNAQ7Z591 1439 aa26.38■■□□□ 1.81
FOXC1-201ENST00000380874 CAMSAP2Q08AD1 1489 aa26.38■■□□□ 1.81
FOXC1-201ENST00000380874 PPP4R2Q9NY27 417 aa26.37■■□□□ 1.81
FOXC1-201ENST00000380874 NCOA1Q15788 1441 aa26.35■■□□□ 1.81
FOXC1-201ENST00000380874 RPRD2Q5VT52 1461 aaKnown RBP26.35■■□□□ 1.81
FOXC1-201ENST00000380874 KIAA0556O60303 1618 aa26.35■■□□□ 1.81
FOXC1-201ENST00000380874 KIF15Q9NS87 1388 aa26.33■■□□□ 1.81
FOXC1-201ENST00000380874 ANP32EQ9BTT0 268 aa26.33■■□□□ 1.81
FOXC1-201ENST00000380874 ARHGEF11O15085 1522 aa26.33■■□□□ 1.8
FOXC1-201ENST00000380874 KIAA1107Q9UPP5 1409 aa26.32■■□□□ 1.8
FOXC1-201ENST00000380874 CCDC136Q96JN2 1154 aa26.32■■□□□ 1.8
FOXC1-201ENST00000380874 RAPGEF6Q8TEU7 1601 aa26.32■■□□□ 1.8
FOXC1-201ENST00000380874 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
FOXC1-201ENST00000380874 ROCK2O75116 1388 aaKnown RBP26.31■■□□□ 1.8
FOXC1-201ENST00000380874 GPATCH8Q9UKJ3 1502 aaKnown RBP26.31■■□□□ 1.8
FOXC1-201ENST00000380874 CC2D1BQ5T0F9 858 aaKnown RBP26.28■■□□□ 1.8
FOXC1-201ENST00000380874 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
FOXC1-201ENST00000380874 ZBED9Q6R2W3 1325 aa26.26■■□□□ 1.79
FOXC1-201ENST00000380874 MAGI1Q96QZ7 1491 aaPredicted RBP26.26■■□□□ 1.79
FOXC1-201ENST00000380874 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
FOXC1-201ENST00000380874 DENND4BO75064 1496 aaPredicted RBP26.25■■□□□ 1.79
FOXC1-201ENST00000380874 GCC2Q8IWJ2 1684 aa26.2■■□□□ 1.78
FOXC1-201ENST00000380874 CHGAP10645 457 aaKnown RBP26.16■■□□□ 1.78
FOXC1-201ENST00000380874 DNMT1P26358 1616 aaKnown RBP26.16■■□□□ 1.78
FOXC1-201ENST00000380874 CCDC144AA2RUR9 1427 aa26.16■■□□□ 1.78
FOXC1-201ENST00000380874 NBPF1Q3BBV0 1214 aa26.15■■□□□ 1.78
FOXC1-201ENST00000380874 PZPP20742 1482 aa26.14■■□□□ 1.78
FOXC1-201ENST00000380874 RSPH4AQ5TD94 716 aa26.14■■□□□ 1.78
FOXC1-201ENST00000380874 NUDCQ9Y266 331 aa26.14■■□□□ 1.78
FOXC1-201ENST00000380874 ATP10BO94823 1461 aa26.14■■□□□ 1.77
FOXC1-201ENST00000380874 KDM5BQ9UGL1 1544 aa26.13■■□□□ 1.77
FOXC1-201ENST00000380874 TEX14Q8IWB6 1497 aa26.11■■□□□ 1.77
FOXC1-201ENST00000380874 KIF14Q15058 1648 aa26.11■■□□□ 1.77
FOXC1-201ENST00000380874 EFCAB2Q5VUJ9 269 aa26.11■■□□□ 1.77
FOXC1-201ENST00000380874 CEP170Q5SW79 1584 aa26.09■■□□□ 1.77
FOXC1-201ENST00000380874 ERICH6BQ5W0A0 696 aa26.08■■□□□ 1.77
FOXC1-201ENST00000380874 NPM2Q86SE8 214 aaKnown RBP26.07■■□□□ 1.76
FOXC1-201ENST00000380874 RALBP1Q15311 655 aa26.07■■□□□ 1.76
FOXC1-201ENST00000380874 TMF1P82094 1093 aa26.06■■□□□ 1.76
FOXC1-201ENST00000380874 KTN1Q86UP2 1357 aaKnown RBP26.05■■□□□ 1.76
FOXC1-201ENST00000380874 SENP3Q9H4L4 574 aaPredicted RBP26.05■■□□□ 1.76
FOXC1-201ENST00000380874 MYBBP1AQ9BQG0 1328 aaKnown RBP26.04■■□□□ 1.76
FOXC1-201ENST00000380874 ARHGAP5Q13017 1502 aa26.03■■□□□ 1.76
FOXC1-201ENST00000380874 PNISRQ8TF01 805 aaKnown RBP26.02■■□□□ 1.76
FOXC1-201ENST00000380874 PANK3Q9H999 370 aa26.02■■□□□ 1.76
FOXC1-201ENST00000380874 KNSTRNQ9Y448 316 aa26.01■■□□□ 1.75
FOXC1-201ENST00000380874 NLRP13Q86W25 1043 aa26■■□□□ 1.75
FOXC1-201ENST00000380874 WDR43Q15061 677 aaKnown RBP eCLIP26■■□□□ 1.75
FOXC1-201ENST00000380874 NUP160Q12769 1436 aa25.99■■□□□ 1.75
FOXC1-201ENST00000380874 ITSN2Q9NZM3 1697 aa25.98■■□□□ 1.75
FOXC1-201ENST00000380874 SPAG9O60271 1321 aaKnown RBP25.98■■□□□ 1.75
FOXC1-201ENST00000380874 ARID4BQ4LE39 1312 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms