RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 RBM28Q9NW13 759 aaKnown RBP6.01□□□□□ -1.45
PTCD2-202ENST00000380639 NAP1L1P55209 391 aaKnown RBP6.01□□□□□ -1.45
PTCD2-202ENST00000380639 PRKG1Q13976 671 aa6.01□□□□□ -1.45
PTCD2-202ENST00000380639 PAXIP1Q6ZW49 1069 aaPredicted RBP6.01□□□□□ -1.45
PTCD2-202ENST00000380639 TCERG1O14776 1098 aaKnown RBP6.01□□□□□ -1.45
PTCD2-202ENST00000380639 KLHL34Q8N239 644 aa6.01□□□□□ -1.45
PTCD2-202ENST00000380639 KAT6BQ8WYB5 2073 aa6.01□□□□□ -1.45
PTCD2-202ENST00000380639 PPP4R4Q6NUP7 873 aa6.01□□□□□ -1.45
PTCD2-202ENST00000380639 CLASRPQ8N2M8 674 aaKnown RBP6.01□□□□□ -1.45
PTCD2-202ENST00000380639 MKL2Q9ULH7 1088 aa6.01□□□□□ -1.45
PTCD2-202ENST00000380639 SH3BGRP55822 239 aaPredicted RBP6□□□□□ -1.45
PTCD2-202ENST00000380639 SEPT14Q6ZU15 432 aa6□□□□□ -1.45
PTCD2-202ENST00000380639 TAOK2Q9UL54 1235 aa6□□□□□ -1.45
PTCD2-202ENST00000380639 SETSIPP0DME0 302 aa6□□□□□ -1.45
PTCD2-202ENST00000380639 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6□□□□□ -1.45
PTCD2-202ENST00000380639 GOLGA6L10A0A0M3HER8 536 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 GOLGA6L10A6NI86 522 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 GOLGA6L19H0YKK7 550 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 TSPY4P0CV99 314 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 TSPY10P0CW01 314 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 CALD1Q05682 793 aaKnown RBP5.99□□□□□ -1.45
PTCD2-202ENST00000380639 DEF6Q9H4E7 631 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 SHROOM4Q9ULL8 1493 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 GPATCH11Q8N954 259 aa5.99□□□□□ -1.45
PTCD2-202ENST00000380639 NF2P35240 595 aa5.98□□□□□ -1.45
PTCD2-202ENST00000380639 ZMAT2Q96NC0 199 aaKnown RBP5.98□□□□□ -1.45
PTCD2-202ENST00000380639 ANO8Q9HCE9 1232 aaPredicted RBP5.98□□□□□ -1.45
PTCD2-202ENST00000380639 CHMP2AO43633 222 aa5.98□□□□□ -1.45
PTCD2-202ENST00000380639 RALBP1Q15311 655 aa5.98□□□□□ -1.45
PTCD2-202ENST00000380639 CFAP53Q96M91 514 aa5.98□□□□□ -1.45
PTCD2-202ENST00000380639 PPARGC1BQ86YN6 1023 aaKnown RBP5.98□□□□□ -1.45
PTCD2-202ENST00000380639 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTCD2-202ENST00000380639 ITGAEP38570 1179 aa5.98□□□□□ -1.45
PTCD2-202ENST00000380639 MYH16Q9H6N6 1097 aa5.97□□□□□ -1.45
PTCD2-202ENST00000380639 CEP89Q96ST8 783 aa5.97□□□□□ -1.45
PTCD2-202ENST00000380639 SRPK2P78362 688 aaKnown RBP5.97□□□□□ -1.45
PTCD2-202ENST00000380639 SEPT10Q9P0V9 454 aa5.97□□□□□ -1.45
PTCD2-202ENST00000380639 NPHP1O15259 732 aa5.96□□□□□ -1.45
PTCD2-202ENST00000380639 FAM9BQ8IZU0 186 aa5.96□□□□□ -1.45
PTCD2-202ENST00000380639 CCAR2Q8N163 923 aaKnown RBP5.96□□□□□ -1.45
PTCD2-202ENST00000380639 CFAP57Q96MR6 1250 aa5.96□□□□□ -1.45
PTCD2-202ENST00000380639 CCDC70Q6NSX1 233 aa5.96□□□□□ -1.46
PTCD2-202ENST00000380639 FAM13BQ9NYF5 915 aa5.96□□□□□ -1.46
PTCD2-202ENST00000380639 FAM184BQ9ULE4 1060 aa5.96□□□□□ -1.46
PTCD2-202ENST00000380639 GSE1Q14687 1217 aa5.96□□□□□ -1.46
PTCD2-202ENST00000380639 STK31Q9BXU1 1019 aa5.96□□□□□ -1.46
PTCD2-202ENST00000380639 HSP90AB1P08238 724 aaKnown RBP5.96□□□□□ -1.46
PTCD2-202ENST00000380639 TPM4P67936 248 aa5.96□□□□□ -1.46
PTCD2-202ENST00000380639 DHX37Q8IY37 1157 aaKnown RBP5.96□□□□□ -1.46
PTCD2-202ENST00000380639 ZNF622Q969S3 477 aaKnown RBP eCLIP5.95□□□□□ -1.46
PTCD2-202ENST00000380639 CCDC34Q96HJ3 373 aa5.95□□□□□ -1.46
PTCD2-202ENST00000380639 IRX6P78412 446 aaPredicted RBP5.95□□□□□ -1.46
PTCD2-202ENST00000380639 TPM3P06753 285 aa5.95□□□□□ -1.46
PTCD2-202ENST00000380639 ENOX2Q16206 610 aaKnown RBP5.95□□□□□ -1.46
PTCD2-202ENST00000380639 TICAM2Q86XR7 235 aa5.95□□□□□ -1.46
PTCD2-202ENST00000380639 SHTN1A0MZ66 631 aa5.94□□□□□ -1.46
PTCD2-202ENST00000380639 WDR66Q8TBY9 1149 aa5.94□□□□□ -1.46
PTCD2-202ENST00000380639 CDR1P51861 262 aa5.94□□□□□ -1.46
PTCD2-202ENST00000380639 SPATA24Q86W54 205 aa5.94□□□□□ -1.46
PTCD2-202ENST00000380639 SEPT8Q92599 483 aa5.94□□□□□ -1.46
PTCD2-202ENST00000380639 IRX3P78415 501 aaPredicted RBP5.94□□□□□ -1.46
PTCD2-202ENST00000380639 SEPT6Q14141 434 aa5.94□□□□□ -1.46
PTCD2-202ENST00000380639 GOLGA6L7A0A1B0GV03 622 aa5.94□□□□□ -1.46
PTCD2-202ENST00000380639 PES1O00541 588 aaKnown RBP5.94□□□□□ -1.46
PTCD2-202ENST00000380639 FTSJ3Q8IY81 847 aaKnown RBP5.94□□□□□ -1.46
PTCD2-202ENST00000380639 RNF168Q8IYW5 571 aaPredicted RBP5.93□□□□□ -1.46
PTCD2-202ENST00000380639 BTN2A1Q7KYR7 527 aa5.93□□□□□ -1.46
PTCD2-202ENST00000380639 SWAP70Q9UH65 585 aa5.93□□□□□ -1.46
PTCD2-202ENST00000380639 GNL2Q13823 731 aaKnown RBP5.93□□□□□ -1.46
PTCD2-202ENST00000380639 FAM50AQ14320 339 aaKnown RBP5.93□□□□□ -1.46
PTCD2-202ENST00000380639 SYAP1Q96A49 352 aaPredicted RBP5.92□□□□□ -1.46
PTCD2-202ENST00000380639 MYO6Q9UM54 1294 aa5.92□□□□□ -1.46
PTCD2-202ENST00000380639 PRPF31Q8WWY3 499 aaKnown RBP5.92□□□□□ -1.46
PTCD2-202ENST00000380639 RUFY1Q96T51 708 aa5.92□□□□□ -1.46
PTCD2-202ENST00000380639 GIGYF2Q6Y7W6 1299 aaKnown RBP5.92□□□□□ -1.46
PTCD2-202ENST00000380639 MAP3K7CLP57077 242 aa5.92□□□□□ -1.46
PTCD2-202ENST00000380639 GBP4Q96PP9 640 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 DNAJC2Q99543 621 aaKnown RBP5.91□□□□□ -1.46
PTCD2-202ENST00000380639 ERICH4A6NGS2 130 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 E9PSI1 815 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 OFD1O75665 1012 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 IPO4Q8TEX9 1081 aaKnown RBP5.91□□□□□ -1.46
PTCD2-202ENST00000380639 CHMP4AQ9BY43 222 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 PDCL2Q8N4E4 241 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 WWC3Q9ULE0 1092 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 UBTFP17480 764 aaKnown RBP5.91□□□□□ -1.46
PTCD2-202ENST00000380639 FAM114A1Q8IWE2 563 aa5.91□□□□□ -1.46
PTCD2-202ENST00000380639 NAP1L2Q9ULW6 460 aaPredicted RBP5.91□□□□□ -1.46
PTCD2-202ENST00000380639 CEP63Q96MT8 703 aa5.9□□□□□ -1.46
PTCD2-202ENST00000380639 DIAPH3Q9NSV4 1193 aa5.9□□□□□ -1.47
PTCD2-202ENST00000380639 GBP2P32456 591 aaPredicted RBP5.9□□□□□ -1.47
PTCD2-202ENST00000380639 BRD2P25440 801 aaKnown RBP5.89□□□□□ -1.47
PTCD2-202ENST00000380639 ACBD3Q9H3P7 528 aa5.89□□□□□ -1.47
PTCD2-202ENST00000380639 SLMAPQ14BN4 828 aa5.89□□□□□ -1.47
PTCD2-202ENST00000380639 LEKR1Q6ZMV7 388 aa5.89□□□□□ -1.47
PTCD2-202ENST00000380639 KIAA0754O94854 1291 aa5.89□□□□□ -1.47
PTCD2-202ENST00000380639 FGD1P98174 961 aa5.89□□□□□ -1.47
PTCD2-202ENST00000380639 WDR70Q9NW82 654 aa5.89□□□□□ -1.47
PTCD2-202ENST00000380639 KNSTRNQ9Y448 316 aa5.89□□□□□ -1.47
PTCD2-202ENST00000380639 CENPHQ9H3R5 247 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms