RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 ZNF326Q5BKZ1 582 aaKnown RBP12.03□□□□□ -0.48
TRIM6-203ENST00000380107 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
TRIM6-203ENST00000380107 THOC2Q8NI27 1593 aaKnown RBP12.03□□□□□ -0.48
TRIM6-203ENST00000380107 CCDC7Q96M83 1385 aa12.02□□□□□ -0.48
TRIM6-203ENST00000380107 HECW1Q76N89 1606 aa12.02□□□□□ -0.48
TRIM6-203ENST00000380107 KIF21AQ7Z4S6 1674 aa12.02□□□□□ -0.49
TRIM6-203ENST00000380107 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
TRIM6-203ENST00000380107 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
TRIM6-203ENST00000380107 BCL11AQ9H165 835 aa12□□□□□ -0.49
TRIM6-203ENST00000380107 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
TRIM6-203ENST00000380107 NCOA1Q15788 1441 aa11.99□□□□□ -0.49
TRIM6-203ENST00000380107 ERCC6Q03468 1493 aa11.98□□□□□ -0.49
TRIM6-203ENST00000380107 ANKRD30BQ9BXX2 1392 aa11.98□□□□□ -0.49
TRIM6-203ENST00000380107 PDS5BQ9NTI5 1447 aa11.98□□□□□ -0.49
TRIM6-203ENST00000380107 IQGAP2Q13576 1575 aa11.97□□□□□ -0.49
TRIM6-203ENST00000380107 PPP4R2Q9NY27 417 aa11.97□□□□□ -0.49
TRIM6-203ENST00000380107 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
TRIM6-203ENST00000380107 ZNF777Q9ULD5 760 aaPredicted RBP11.97□□□□□ -0.49
TRIM6-203ENST00000380107 DAPK1P53355 1430 aa11.96□□□□□ -0.5
TRIM6-203ENST00000380107 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
TRIM6-203ENST00000380107 ABCC5O15440 1437 aa11.95□□□□□ -0.5
TRIM6-203ENST00000380107 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
TRIM6-203ENST00000380107 WDR62O43379 1518 aa11.95□□□□□ -0.5
TRIM6-203ENST00000380107 RPRD2Q5VT52 1461 aaKnown RBP11.95□□□□□ -0.5
TRIM6-203ENST00000380107 TEX14Q8IWB6 1497 aa11.94□□□□□ -0.5
TRIM6-203ENST00000380107 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
TRIM6-203ENST00000380107 MIA2Q96PC5 1412 aa11.94□□□□□ -0.5
TRIM6-203ENST00000380107 FANCIQ9NVI1 1328 aa11.94□□□□□ -0.5
TRIM6-203ENST00000380107 AKNAQ7Z591 1439 aa11.94□□□□□ -0.5
TRIM6-203ENST00000380107 SPATA31E1Q6ZUB1 1445 aa11.92□□□□□ -0.5
TRIM6-203ENST00000380107 ZNF608Q9ULD9 1512 aaPredicted RBP11.9□□□□□ -0.5
TRIM6-203ENST00000380107 ADAMTS12P58397 1594 aa11.9□□□□□ -0.5
TRIM6-203ENST00000380107 PRG4Q92954 1404 aaPredicted RBP11.9□□□□□ -0.51
TRIM6-203ENST00000380107 PKD2Q13563 968 aa11.89□□□□□ -0.51
TRIM6-203ENST00000380107 CFDP1Q9UEE9 299 aaPredicted RBP11.89□□□□□ -0.51
TRIM6-203ENST00000380107 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
TRIM6-203ENST00000380107 DNMT1P26358 1616 aaKnown RBP11.88□□□□□ -0.51
TRIM6-203ENST00000380107 BCORL1Q5H9F3 1711 aa11.88□□□□□ -0.51
TRIM6-203ENST00000380107 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
TRIM6-203ENST00000380107 ROCK1Q13464 1354 aa11.87□□□□□ -0.51
TRIM6-203ENST00000380107 USP47Q96K76 1375 aa11.87□□□□□ -0.51
TRIM6-203ENST00000380107 PZPP20742 1482 aa11.87□□□□□ -0.51
TRIM6-203ENST00000380107 DHX29Q7Z478 1369 aaKnown RBP11.87□□□□□ -0.51
TRIM6-203ENST00000380107 ERICH6BQ5W0A0 696 aa11.86□□□□□ -0.51
TRIM6-203ENST00000380107 DISP1Q96F81 1524 aa11.86□□□□□ -0.51
TRIM6-203ENST00000380107 FBLN2P98095 1184 aa11.86□□□□□ -0.51
TRIM6-203ENST00000380107 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
TRIM6-203ENST00000380107 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
TRIM6-203ENST00000380107 KIAA0556O60303 1618 aa11.84□□□□□ -0.51
TRIM6-203ENST00000380107 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.51
TRIM6-203ENST00000380107 PAK3O75914 559 aaPredicted RBP11.83□□□□□ -0.52
TRIM6-203ENST00000380107 NBR1Q14596 966 aa11.83□□□□□ -0.52
TRIM6-203ENST00000380107 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
TRIM6-203ENST00000380107 PLB1Q6P1J6 1458 aa11.83□□□□□ -0.52
TRIM6-203ENST00000380107 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
TRIM6-203ENST00000380107 TMC1Q8TDI8 760 aa11.82□□□□□ -0.52
TRIM6-203ENST00000380107 NUDCQ9Y266 331 aa11.82□□□□□ -0.52
TRIM6-203ENST00000380107 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
TRIM6-203ENST00000380107 CARD11Q9BXL7 1154 aa11.82□□□□□ -0.52
TRIM6-203ENST00000380107 KIF14Q15058 1648 aa11.82□□□□□ -0.52
TRIM6-203ENST00000380107 SMG6Q86US8 1419 aaKnown RBP11.81□□□□□ -0.52
TRIM6-203ENST00000380107 KIAA1107Q9UPP5 1409 aa11.81□□□□□ -0.52
TRIM6-203ENST00000380107 ST20-MTHFSA0A0A6YYL1 179 aa11.8□□□□□ -0.52
TRIM6-203ENST00000380107 PNISRQ8TF01 805 aaKnown RBP11.8□□□□□ -0.52
TRIM6-203ENST00000380107 KIAA0586Q9BVV6 1533 aa11.79□□□□□ -0.52
TRIM6-203ENST00000380107 GPATCH8Q9UKJ3 1502 aaKnown RBP11.79□□□□□ -0.52
TRIM6-203ENST00000380107 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
TRIM6-203ENST00000380107 NUP155O75694 1391 aa11.79□□□□□ -0.52
TRIM6-203ENST00000380107 TROQ12816 1431 aaPredicted RBP11.78□□□□□ -0.52
TRIM6-203ENST00000380107 DCAF11Q8TEB1 546 aa11.78□□□□□ -0.52
TRIM6-203ENST00000380107 KDM5CP41229 1560 aa11.77□□□□□ -0.52
TRIM6-203ENST00000380107 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
TRIM6-203ENST00000380107 CHMP7Q8WUX9 453 aaPredicted RBP11.77□□□□□ -0.53
TRIM6-203ENST00000380107 NOP58Q9Y2X3 529 aaKnown RBP11.77□□□□□ -0.53
TRIM6-203ENST00000380107 GRIN2AQ12879 1464 aa11.76□□□□□ -0.53
TRIM6-203ENST00000380107 ANKRD30AQ9BXX3 1397 aa11.76□□□□□ -0.53
TRIM6-203ENST00000380107 HNRNPMP52272 730 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRIM6-203ENST00000380107 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
TRIM6-203ENST00000380107 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
TRIM6-203ENST00000380107 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
TRIM6-203ENST00000380107 RNF123Q5XPI4 1314 aa11.74□□□□□ -0.53
TRIM6-203ENST00000380107 NPM2Q86SE8 214 aaKnown RBP11.74□□□□□ -0.53
TRIM6-203ENST00000380107 EXOC6Q8TAG9 804 aa11.73□□□□□ -0.53
TRIM6-203ENST00000380107 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
TRIM6-203ENST00000380107 ITSN2Q9NZM3 1697 aa11.72□□□□□ -0.53
TRIM6-203ENST00000380107 EIF4G3O43432 1585 aaKnown RBP11.72□□□□□ -0.53
TRIM6-203ENST00000380107 PLEKHD1A6NEE1 506 aa11.72□□□□□ -0.53
TRIM6-203ENST00000380107 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
TRIM6-203ENST00000380107 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.53
TRIM6-203ENST00000380107 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
TRIM6-203ENST00000380107 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
TRIM6-203ENST00000380107 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.53
TRIM6-203ENST00000380107 C9orf84Q5VXU9 1444 aa11.71□□□□□ -0.53
TRIM6-203ENST00000380107 KIF15Q9NS87 1388 aa11.71□□□□□ -0.54
TRIM6-203ENST00000380107 TSPY4P0CV99 314 aa11.71□□□□□ -0.54
TRIM6-203ENST00000380107 TSPY10P0CW01 314 aa11.71□□□□□ -0.54
TRIM6-203ENST00000380107 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
TRIM6-203ENST00000380107 ROCK2O75116 1388 aaKnown RBP11.7□□□□□ -0.54
TRIM6-203ENST00000380107 ADGRL2O95490 1459 aa11.7□□□□□ -0.54
TRIM6-203ENST00000380107 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms