RNA–Protein interactions for RNA: ENST00000379883.2

DDX58-202, Transcript of DExD/H-box helicase 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX58, Length 4,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-202ENST00000379883 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.45□□□□□ -0.9
DDX58-202ENST00000379883 KIF7Q2M1P5 1343 aa9.44□□□□□ -0.9
DDX58-202ENST00000379883 ZMYND15Q9H091 742 aa9.44□□□□□ -0.9
DDX58-202ENST00000379883 FYCO1Q9BQS8 1478 aa9.44□□□□□ -0.9
DDX58-202ENST00000379883 CNGB1Q14028 1251 aaPredicted RBP9.44□□□□□ -0.9
DDX58-202ENST00000379883 RALBP1Q15311 655 aa9.44□□□□□ -0.9
DDX58-202ENST00000379883 CFAP43Q8NDM7 1665 aa9.43□□□□□ -0.9
DDX58-202ENST00000379883 CARMIL1Q5VZK9 1371 aa9.43□□□□□ -0.9
DDX58-202ENST00000379883 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
DDX58-202ENST00000379883 CUX1P39880 1505 aa9.43□□□□□ -0.9
DDX58-202ENST00000379883 PTPN23Q9H3S7 1636 aa9.43□□□□□ -0.9
DDX58-202ENST00000379883 CENPQQ7L2Z9 268 aaPredicted RBP9.42□□□□□ -0.9
DDX58-202ENST00000379883 ATAD2BQ9ULI0 1458 aa9.42□□□□□ -0.9
DDX58-202ENST00000379883 P3H3Q8IVL6 736 aa9.42□□□□□ -0.9
DDX58-202ENST00000379883 CASKIN1Q8WXD9 1431 aa9.42□□□□□ -0.9
DDX58-202ENST00000379883 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
DDX58-202ENST00000379883 NAIPQ13075 1403 aa9.41□□□□□ -0.9
DDX58-202ENST00000379883 GOLGA6L3A6NEY3 463 aa9.41□□□□□ -0.9
DDX58-202ENST00000379883 FRAT2O75474 233 aaPredicted RBP9.41□□□□□ -0.9
DDX58-202ENST00000379883 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
DDX58-202ENST00000379883 BRD4O60885 1362 aaPredicted RBP9.41□□□□□ -0.9
DDX58-202ENST00000379883 KIF15Q9NS87 1388 aa9.41□□□□□ -0.9
DDX58-202ENST00000379883 AQRO60306 1485 aaKnown RBP eCLIP9.41□□□□□ -0.9
DDX58-202ENST00000379883 MIA2Q96PC5 1412 aa9.4□□□□□ -0.9
DDX58-202ENST00000379883 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.91
DDX58-202ENST00000379883 PODXL2Q9NZ53 605 aa9.4□□□□□ -0.91
DDX58-202ENST00000379883 MYBBP1AQ9BQG0 1328 aaKnown RBP9.39□□□□□ -0.91
DDX58-202ENST00000379883 SLC4A3P48751 1232 aa9.39□□□□□ -0.91
DDX58-202ENST00000379883 RRP7BPQ9NSQ0 103 aa9.38□□□□□ -0.91
DDX58-202ENST00000379883 TRIM44Q96DX7 344 aaPredicted RBP9.38□□□□□ -0.91
DDX58-202ENST00000379883 IGF1RP08069 1367 aa9.38□□□□□ -0.91
DDX58-202ENST00000379883 EFCAB5A4FU69 1503 aa9.38□□□□□ -0.91
DDX58-202ENST00000379883 MYOM3Q5VTT5 1437 aa9.37□□□□□ -0.91
DDX58-202ENST00000379883 TPM2P07951 284 aa9.37□□□□□ -0.91
DDX58-202ENST00000379883 CLCN1P35523 988 aa9.37□□□□□ -0.91
DDX58-202ENST00000379883 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
DDX58-202ENST00000379883 PABPN1Q86U42 306 aaKnown RBP eCLIP9.36□□□□□ -0.91
DDX58-202ENST00000379883 ABCA5Q8WWZ7 1642 aa9.36□□□□□ -0.91
DDX58-202ENST00000379883 FGD5Q6ZNL6 1462 aa9.36□□□□□ -0.91
DDX58-202ENST00000379883 CRBNQ96SW2 442 aa9.35□□□□□ -0.91
DDX58-202ENST00000379883 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
DDX58-202ENST00000379883 KDM5BQ9UGL1 1544 aa9.35□□□□□ -0.91
DDX58-202ENST00000379883 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
DDX58-202ENST00000379883 ANP32BQ92688 251 aaKnown RBP9.35□□□□□ -0.91
DDX58-202ENST00000379883 CHIC2Q9UKJ5 165 aa9.34□□□□□ -0.91
DDX58-202ENST00000379883 DCAF11Q8TEB1 546 aa9.33□□□□□ -0.92
DDX58-202ENST00000379883 FHOD3Q2V2M9 1422 aa9.33□□□□□ -0.92
DDX58-202ENST00000379883 MRE11P49959 708 aa9.33□□□□□ -0.92
DDX58-202ENST00000379883 RRAGDQ9NQL2 400 aaPredicted RBP9.33□□□□□ -0.92
DDX58-202ENST00000379883 DHX29Q7Z478 1369 aaKnown RBP9.33□□□□□ -0.92
DDX58-202ENST00000379883 HECW1Q76N89 1606 aa9.32□□□□□ -0.92
DDX58-202ENST00000379883 LRPPRCP42704 1394 aaKnown RBP9.32□□□□□ -0.92
DDX58-202ENST00000379883 USP47Q96K76 1375 aa9.32□□□□□ -0.92
DDX58-202ENST00000379883 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
DDX58-202ENST00000379883 ZNF326Q5BKZ1 582 aaKnown RBP9.32□□□□□ -0.92
DDX58-202ENST00000379883 PDCL3Q9H2J4 239 aa9.32□□□□□ -0.92
DDX58-202ENST00000379883 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
DDX58-202ENST00000379883 MAP7D2Q96T17 732 aa9.32□□□□□ -0.92
DDX58-202ENST00000379883 PTMSP20962 102 aa9.31□□□□□ -0.92
DDX58-202ENST00000379883 RGS3P49796 1198 aa9.31□□□□□ -0.92
DDX58-202ENST00000379883 RPRD2Q5VT52 1461 aaKnown RBP9.31□□□□□ -0.92
DDX58-202ENST00000379883 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
DDX58-202ENST00000379883 NBPF8Q3BBV2 869 aa9.31□□□□□ -0.92
DDX58-202ENST00000379883 PTPRKQ15262 1439 aa9.3□□□□□ -0.92
DDX58-202ENST00000379883 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
DDX58-202ENST00000379883 POGKQ9P215 609 aa9.3□□□□□ -0.92
DDX58-202ENST00000379883 MAPK8IP3Q9UPT6 1336 aa9.3□□□□□ -0.92
DDX58-202ENST00000379883 NCLP19338 710 aaKnown RBP9.3□□□□□ -0.92
DDX58-202ENST00000379883 INSRP06213 1382 aa9.29□□□□□ -0.92
DDX58-202ENST00000379883 EIF3AQ14152 1382 aaKnown RBP9.29□□□□□ -0.92
DDX58-202ENST00000379883 ARXQ96QS3 562 aa9.29□□□□□ -0.92
DDX58-202ENST00000379883 SENP3-EIF4A1A0A087X0R7 540 aa9.29□□□□□ -0.92
DDX58-202ENST00000379883 EHBP1L1Q8N3D4 1523 aa9.29□□□□□ -0.92
DDX58-202ENST00000379883 DDX11L8A8MPP1 907 aa9.28□□□□□ -0.92
DDX58-202ENST00000379883 C8orf34Q49A92 452 aa9.28□□□□□ -0.92
DDX58-202ENST00000379883 ANKRD30BQ9BXX2 1392 aa9.28□□□□□ -0.92
DDX58-202ENST00000379883 CENPJQ9HC77 1338 aaPredicted RBP9.28□□□□□ -0.92
DDX58-202ENST00000379883 PLIN1O60240 522 aa9.28□□□□□ -0.92
DDX58-202ENST00000379883 CARD11Q9BXL7 1154 aa9.28□□□□□ -0.92
DDX58-202ENST00000379883 SLKQ9H2G2 1235 aaPredicted RBP9.28□□□□□ -0.92
DDX58-202ENST00000379883 SUPT6HQ7KZ85 1726 aaKnown RBP9.28□□□□□ -0.92
DDX58-202ENST00000379883 POLR1AO95602 1720 aaPredicted RBP9.27□□□□□ -0.92
DDX58-202ENST00000379883 KDM2BQ8NHM5 1336 aa9.27□□□□□ -0.93
DDX58-202ENST00000379883 ESPNB1AK53 854 aa9.27□□□□□ -0.93
DDX58-202ENST00000379883 CALD1Q05682 793 aaKnown RBP9.27□□□□□ -0.93
DDX58-202ENST00000379883 MTERF4Q7Z6M4 381 aaKnown RBP9.26□□□□□ -0.93
DDX58-202ENST00000379883 XRCC6P12956 609 aaKnown RBP eCLIP9.25□□□□□ -0.93
DDX58-202ENST00000379883 WDR43Q15061 677 aaKnown RBP eCLIP9.25□□□□□ -0.93
DDX58-202ENST00000379883 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
DDX58-202ENST00000379883 FOXD1Q16676 465 aa9.25□□□□□ -0.93
DDX58-202ENST00000379883 GCC2Q8IWJ2 1684 aa9.25□□□□□ -0.93
DDX58-202ENST00000379883 CANXP27824 592 aaKnown RBP9.24□□□□□ -0.93
DDX58-202ENST00000379883 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.24□□□□□ -0.93
DDX58-202ENST00000379883 CHMP5Q9NZZ3 219 aa9.24□□□□□ -0.93
DDX58-202ENST00000379883 SLC24A1O60721 1099 aa9.24□□□□□ -0.93
DDX58-202ENST00000379883 MSNP26038 577 aaKnown RBP9.24□□□□□ -0.93
DDX58-202ENST00000379883 SKOR2Q2VWA4 1001 aaPredicted RBP9.24□□□□□ -0.93
DDX58-202ENST00000379883 THOC2Q8NI27 1593 aaKnown RBP9.24□□□□□ -0.93
DDX58-202ENST00000379883 TCOF1Q13428 1488 aaKnown RBP9.24□□□□□ -0.93
DDX58-202ENST00000379883 ROCK1Q13464 1354 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms