RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
HERPUD1-203ENST00000379792 CDC42BPAQ5VT25 1732 aa21.51■■□□□ 1.03
HERPUD1-203ENST00000379792 ABCA9Q8IUA7 1624 aa21.51■■□□□ 1.03
HERPUD1-203ENST00000379792 CD109Q6YHK3 1445 aa21.51■■□□□ 1.03
HERPUD1-203ENST00000379792 PCGF6Q9BYE7 350 aa21.51■■□□□ 1.03
HERPUD1-203ENST00000379792 PLCH2O75038 1416 aa21.5■■□□□ 1.03
HERPUD1-203ENST00000379792 MIA2Q96PC5 1412 aa21.49■■□□□ 1.03
HERPUD1-203ENST00000379792 ARHGAP5Q13017 1502 aa21.48■■□□□ 1.03
HERPUD1-203ENST00000379792 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
HERPUD1-203ENST00000379792 ITGAEP38570 1179 aa21.47■■□□□ 1.03
HERPUD1-203ENST00000379792 PREX2Q70Z35 1606 aa21.47■■□□□ 1.03
HERPUD1-203ENST00000379792 MYO5CQ9NQX4 1742 aa21.47■■□□□ 1.03
HERPUD1-203ENST00000379792 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
HERPUD1-203ENST00000379792 CDC42BPBQ9Y5S2 1711 aa21.46■■□□□ 1.03
HERPUD1-203ENST00000379792 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
HERPUD1-203ENST00000379792 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
HERPUD1-203ENST00000379792 CAMSAP2Q08AD1 1489 aa21.42■■□□□ 1.02
HERPUD1-203ENST00000379792 HNRNPMP52272 730 aaKnown RBP eCLIP21.4■■□□□ 1.02
HERPUD1-203ENST00000379792 FANCAO15360 1455 aa21.4■■□□□ 1.02
HERPUD1-203ENST00000379792 COL17A1Q9UMD9 1497 aaPredicted RBP21.39■■□□□ 1.01
HERPUD1-203ENST00000379792 SAMD9LQ8IVG5 1584 aa21.38■■□□□ 1.01
HERPUD1-203ENST00000379792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.38■■□□□ 1.01
HERPUD1-203ENST00000379792 ARAP3Q8WWN8 1544 aa21.37■■□□□ 1.01
HERPUD1-203ENST00000379792 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
HERPUD1-203ENST00000379792 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1
HERPUD1-203ENST00000379792 PTPRKQ15262 1439 aa21.32■■□□□ 1
HERPUD1-203ENST00000379792 NEO1Q92859 1461 aa21.32■■□□□ 1
HERPUD1-203ENST00000379792 CHIC2Q9UKJ5 165 aa21.32■■□□□ 1
HERPUD1-203ENST00000379792 SYCP2Q9BX26 1530 aa21.31■■□□□ 1
HERPUD1-203ENST00000379792 ABCC5O15440 1437 aa21.31■■□□□ 1
HERPUD1-203ENST00000379792 MBD5Q9P267 1494 aa21.3■■□□□ 1
HERPUD1-203ENST00000379792 DAPK1P53355 1430 aa21.3■■□□□ 1
HERPUD1-203ENST00000379792 PLEKHH2Q8IVE3 1493 aa21.3■■□□□ 1
HERPUD1-203ENST00000379792 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
HERPUD1-203ENST00000379792 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
HERPUD1-203ENST00000379792 ADGRL1O94910 1474 aa21.29■■□□□ 1
HERPUD1-203ENST00000379792 ABCC1P33527 1531 aa21.28■■□□□ 1
HERPUD1-203ENST00000379792 TRAPPC8Q9Y2L5 1435 aa21.27■■□□□ 1
HERPUD1-203ENST00000379792 AFAP1Q8N556 730 aa21.27■■□□□ 1
HERPUD1-203ENST00000379792 DNMT1P26358 1616 aaKnown RBP21.26■□□□□ 0.99
HERPUD1-203ENST00000379792 CFAP74Q9C0B2 1584 aa21.25■□□□□ 0.99
HERPUD1-203ENST00000379792 ARHGEF5Q12774 1597 aa21.24■□□□□ 0.99
HERPUD1-203ENST00000379792 CCDC141Q6ZP82 1450 aa21.24■□□□□ 0.99
HERPUD1-203ENST00000379792 TSPY4P0CV99 314 aa21.23■□□□□ 0.99
HERPUD1-203ENST00000379792 TSPY10P0CW01 314 aa21.23■□□□□ 0.99
HERPUD1-203ENST00000379792 RSPH4AQ5TD94 716 aa21.23■□□□□ 0.99
HERPUD1-203ENST00000379792 RAPGEF3O95398 923 aa21.23■□□□□ 0.99
HERPUD1-203ENST00000379792 RRP7BPQ9NSQ0 103 aa21.22■□□□□ 0.99
HERPUD1-203ENST00000379792 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
HERPUD1-203ENST00000379792 DENND4BO75064 1496 aaPredicted RBP21.19■□□□□ 0.98
HERPUD1-203ENST00000379792 SPAG9O60271 1321 aaKnown RBP21.17■□□□□ 0.98
HERPUD1-203ENST00000379792 AEBP2Q6ZN18 517 aaPredicted RBP21.17■□□□□ 0.98
HERPUD1-203ENST00000379792 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
HERPUD1-203ENST00000379792 CROCC2H7BZ55 1655 aa21.17■□□□□ 0.98
HERPUD1-203ENST00000379792 POGZQ7Z3K3 1410 aa21.16■□□□□ 0.98
HERPUD1-203ENST00000379792 SHANK2Q9UPX8 1470 aa21.15■□□□□ 0.98
HERPUD1-203ENST00000379792 ZNF518AQ6AHZ1 1483 aa21.14■□□□□ 0.98
HERPUD1-203ENST00000379792 NCOA1Q15788 1441 aa21.13■□□□□ 0.97
HERPUD1-203ENST00000379792 FRMPD1Q5SYB0 1578 aa21.13■□□□□ 0.97
HERPUD1-203ENST00000379792 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
HERPUD1-203ENST00000379792 ANKRD30AQ9BXX3 1397 aa21.13■□□□□ 0.97
HERPUD1-203ENST00000379792 RICTORQ6R327 1708 aa21.11■□□□□ 0.97
HERPUD1-203ENST00000379792 NAIPQ13075 1403 aa21.11■□□□□ 0.97
HERPUD1-203ENST00000379792 ADGRL2O95490 1459 aa21.1■□□□□ 0.97
HERPUD1-203ENST00000379792 KDM4FA0A1W2PPD8 638 aa21.1■□□□□ 0.97
HERPUD1-203ENST00000379792 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
HERPUD1-203ENST00000379792 SETD5Q9C0A6 1442 aa21.1■□□□□ 0.97
HERPUD1-203ENST00000379792 MAST1Q9Y2H9 1570 aa21.09■□□□□ 0.97
HERPUD1-203ENST00000379792 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.96
HERPUD1-203ENST00000379792 KIF15Q9NS87 1388 aa21.07■□□□□ 0.96
HERPUD1-203ENST00000379792 RTEL1-TNFRSF6BF6WH68 1400 aa21.07■□□□□ 0.96
HERPUD1-203ENST00000379792 KDM5CP41229 1560 aa21.07■□□□□ 0.96
HERPUD1-203ENST00000379792 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
HERPUD1-203ENST00000379792 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
HERPUD1-203ENST00000379792 ATP7AQ04656 1500 aa21.06■□□□□ 0.96
HERPUD1-203ENST00000379792 ZMYM4Q5VZL5 1548 aa21.06■□□□□ 0.96
HERPUD1-203ENST00000379792 INO80Q9ULG1 1556 aaPredicted RBP21.04■□□□□ 0.96
HERPUD1-203ENST00000379792 MAGI2Q86UL8 1455 aa21.04■□□□□ 0.96
HERPUD1-203ENST00000379792 MLH3Q9UHC1 1453 aa21.04■□□□□ 0.96
HERPUD1-203ENST00000379792 KIDINS220Q9ULH0 1771 aa21.03■□□□□ 0.96
HERPUD1-203ENST00000379792 HECW2Q9P2P5 1572 aa21.02■□□□□ 0.96
HERPUD1-203ENST00000379792 YEATS2Q9ULM3 1422 aa21.02■□□□□ 0.95
HERPUD1-203ENST00000379792 ARHGEF40Q8TER5 1519 aa21.01■□□□□ 0.95
HERPUD1-203ENST00000379792 PLXNC1O60486 1568 aa21.01■□□□□ 0.95
HERPUD1-203ENST00000379792 ANKRD50Q9ULJ7 1429 aa21■□□□□ 0.95
HERPUD1-203ENST00000379792 GCC2Q8IWJ2 1684 aa21■□□□□ 0.95
HERPUD1-203ENST00000379792 DUOX2Q9NRD8 1548 aa20.97■□□□□ 0.95
HERPUD1-203ENST00000379792 ABCA6Q8N139 1617 aa20.95■□□□□ 0.95
HERPUD1-203ENST00000379792 TRIM52Q96A61 297 aa20.95■□□□□ 0.94
HERPUD1-203ENST00000379792 DHX29Q7Z478 1369 aaKnown RBP20.94■□□□□ 0.94
HERPUD1-203ENST00000379792 HRCP23327 699 aa20.94■□□□□ 0.94
HERPUD1-203ENST00000379792 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
HERPUD1-203ENST00000379792 A2MP01023 1474 aa20.93■□□□□ 0.94
HERPUD1-203ENST00000379792 KIF3BO15066 747 aa20.91■□□□□ 0.94
HERPUD1-203ENST00000379792 ERBINQ96RT1 1412 aa20.91■□□□□ 0.94
HERPUD1-203ENST00000379792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.9■□□□□ 0.945e-8■□□□□ 9.6
HERPUD1-203ENST00000379792 ATP10AO60312 1499 aa20.89■□□□□ 0.94
HERPUD1-203ENST00000379792 ARID4BQ4LE39 1312 aaPredicted RBP20.88■□□□□ 0.93
HERPUD1-203ENST00000379792 BCORL1Q5H9F3 1711 aa20.88■□□□□ 0.93
HERPUD1-203ENST00000379792 ADAMTSL3P82987 1691 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms