RNA–Protein interactions for RNA: ENST00000379472.4

KCNC1-202, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 1 (best) BASIC

Gene KCNC1, Length 7,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-202ENST00000379472 MS4A1P11836 297 aa20.27■□□□□ 0.84
KCNC1-202ENST00000379472 APBB1O00213 710 aa20.27■□□□□ 0.83
KCNC1-202ENST00000379472 CSRNP3Q8WYN3 585 aa20.26■□□□□ 0.83
KCNC1-202ENST00000379472 TCEAL9Q9UHQ7 104 aa20.25■□□□□ 0.83
KCNC1-202ENST00000379472 FRAT2O75474 233 aaPredicted RBP20.25■□□□□ 0.83
KCNC1-202ENST00000379472 CCDC34Q96HJ3 373 aa20.23■□□□□ 0.83
KCNC1-202ENST00000379472 CWC22Q9HCG8 908 aaKnown RBP20.23■□□□□ 0.83
KCNC1-202ENST00000379472 PATL2C9JE40 543 aaKnown RBP20.22■□□□□ 0.83
KCNC1-202ENST00000379472 HDGFP51858 240 aaKnown RBP20.2■□□□□ 0.82
KCNC1-202ENST00000379472 CTDP1Q9Y5B0 961 aaPredicted RBP20.2■□□□□ 0.82
KCNC1-202ENST00000379472 MSH5O43196 834 aa20.2■□□□□ 0.82
KCNC1-202ENST00000379472 HTATSF1O43719 755 aaKnown RBP20.2■□□□□ 0.82
KCNC1-202ENST00000379472 PES1O00541 588 aaKnown RBP20.19■□□□□ 0.82
KCNC1-202ENST00000379472 GTF2E1P29083 439 aaPredicted RBP20.19■□□□□ 0.82
KCNC1-202ENST00000379472 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
KCNC1-202ENST00000379472 CC2D1BQ5T0F9 858 aaKnown RBP20.17■□□□□ 0.82
KCNC1-202ENST00000379472 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
KCNC1-202ENST00000379472 USP35Q9P2H5 1018 aa20.17■□□□□ 0.82
KCNC1-202ENST00000379472 PLEKHD1A6NEE1 506 aa20.17■□□□□ 0.82
KCNC1-202ENST00000379472 TOMM22Q9NS69 142 aa20.15■□□□□ 0.82
KCNC1-202ENST00000379472 RAD21O60216 631 aa20.14■□□□□ 0.81
KCNC1-202ENST00000379472 TPM3P06753 285 aa20.14■□□□□ 0.81
KCNC1-202ENST00000379472 CARD11Q9BXL7 1154 aa20.13■□□□□ 0.81
KCNC1-202ENST00000379472 TRIM34Q9BYJ4 488 aa20.12■□□□□ 0.81
KCNC1-202ENST00000379472 SAFB2Q14151 953 aaKnown RBP eCLIP20.12■□□□□ 0.81
KCNC1-202ENST00000379472 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.11■□□□□ 0.81
KCNC1-202ENST00000379472 SETQ01105 290 aaPredicted RBP20.1■□□□□ 0.81
KCNC1-202ENST00000379472 CFAP44Q96MT7 982 aa20.1■□□□□ 0.81
KCNC1-202ENST00000379472 CALRP27797 417 aaKnown RBP20.1■□□□□ 0.81
KCNC1-202ENST00000379472 GPATCH3Q96I76 525 aa20.1■□□□□ 0.81
KCNC1-202ENST00000379472 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
KCNC1-202ENST00000379472 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
KCNC1-202ENST00000379472 TPD52L1Q16890 204 aaPredicted RBP20.09■□□□□ 0.81
KCNC1-202ENST00000379472 TSR1Q2NL82 804 aaKnown RBP20.05■□□□□ 0.8
KCNC1-202ENST00000379472 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
KCNC1-202ENST00000379472 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
KCNC1-202ENST00000379472 RRP12Q5JTH9 1297 aaKnown RBP20.02■□□□□ 0.8
KCNC1-202ENST00000379472 TRIM6-TRIM34B2RNG4 842 aa20.02■□□□□ 0.79
KCNC1-202ENST00000379472 SYAP1Q96A49 352 aaPredicted RBP20.01■□□□□ 0.79
KCNC1-202ENST00000379472 STK26Q9P289 416 aa20.01■□□□□ 0.79
KCNC1-202ENST00000379472 TPM2P07951 284 aa20■□□□□ 0.79
KCNC1-202ENST00000379472 MEX3CQ5U5Q3 659 aaKnown RBP19.98■□□□□ 0.79
KCNC1-202ENST00000379472 FBXW7Q969H0 707 aa19.98■□□□□ 0.79
KCNC1-202ENST00000379472 B4GALNT3Q6L9W6 998 aa19.97■□□□□ 0.79
KCNC1-202ENST00000379472 SF3A1Q15459 793 aaKnown RBP19.97■□□□□ 0.79
KCNC1-202ENST00000379472 MORC1Q86VD1 984 aa19.97■□□□□ 0.79
KCNC1-202ENST00000379472 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
KCNC1-202ENST00000379472 NOP58Q9Y2X3 529 aaKnown RBP19.96■□□□□ 0.79
KCNC1-202ENST00000379472 PAF1Q8N7H5 531 aa19.96■□□□□ 0.79
KCNC1-202ENST00000379472 GZF1Q9H116 711 aaPredicted RBP19.96■□□□□ 0.79
KCNC1-202ENST00000379472 GBP4Q96PP9 640 aa19.95■□□□□ 0.78
KCNC1-202ENST00000379472 CCAR2Q8N163 923 aaKnown RBP19.95■□□□□ 0.78
KCNC1-202ENST00000379472 NOL10Q9BSC4 688 aaKnown RBP19.95■□□□□ 0.78
KCNC1-202ENST00000379472 AKAP17AQ02040 695 aaKnown RBP19.94■□□□□ 0.78
KCNC1-202ENST00000379472 CFDP1Q9UEE9 299 aaPredicted RBP19.94■□□□□ 0.78
KCNC1-202ENST00000379472 SAMD1Q6SPF0 538 aaPredicted RBP19.93■□□□□ 0.78
KCNC1-202ENST00000379472 CSPP1Q1MSJ5 1256 aa19.93■□□□□ 0.78
KCNC1-202ENST00000379472 CCDC43Q96MW1 224 aaKnown RBP19.93■□□□□ 0.78
KCNC1-202ENST00000379472 PTMSP20962 102 aa19.92■□□□□ 0.78
KCNC1-202ENST00000379472 AMOTL1Q8IY63 956 aa19.92■□□□□ 0.78
KCNC1-202ENST00000379472 KANK1Q14678 1352 aa19.92■□□□□ 0.78
KCNC1-202ENST00000379472 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
KCNC1-202ENST00000379472 PCMTD1Q96MG8 357 aaPredicted RBP19.92■□□□□ 0.78
KCNC1-202ENST00000379472 SPAG9O60271 1321 aaKnown RBP19.91■□□□□ 0.78
KCNC1-202ENST00000379472 IPO8O15397 1037 aaKnown RBP19.91■□□□□ 0.78
KCNC1-202ENST00000379472 CCDC70Q6NSX1 233 aa19.91■□□□□ 0.78
KCNC1-202ENST00000379472 NOL8Q76FK4 1167 aaKnown RBP19.91■□□□□ 0.78
KCNC1-202ENST00000379472 STK31Q9BXU1 1019 aa19.9■□□□□ 0.78
KCNC1-202ENST00000379472 ODF2Q5BJF6 829 aa19.89■□□□□ 0.77
KCNC1-202ENST00000379472 EVA1CP58658 441 aa19.88■□□□□ 0.77
KCNC1-202ENST00000379472 ITPRIPQ8IWB1 547 aa19.88■□□□□ 0.77
KCNC1-202ENST00000379472 TMF1P82094 1093 aa19.87■□□□□ 0.77
KCNC1-202ENST00000379472 R3HCC1Q9Y3T6 440 aaKnown RBP19.87■□□□□ 0.77
KCNC1-202ENST00000379472 TPM1P09493 284 aa19.87■□□□□ 0.77
KCNC1-202ENST00000379472 MIER1Q8N108 512 aa19.87■□□□□ 0.77
KCNC1-202ENST00000379472 DHX16O60231 1041 aaKnown RBP19.86■□□□□ 0.77
KCNC1-202ENST00000379472 SLC4A10Q6U841 1118 aa19.86■□□□□ 0.77
KCNC1-202ENST00000379472 VSIG10Q8N0Z9 540 aa19.86■□□□□ 0.77
KCNC1-202ENST00000379472 CALD1Q05682 793 aaKnown RBP19.86■□□□□ 0.77
KCNC1-202ENST00000379472 H3BQV1 296 aa19.85■□□□□ 0.77
KCNC1-202ENST00000379472 IFFO2Q5TF58 517 aa19.85■□□□□ 0.77
KCNC1-202ENST00000379472 CHMP4AQ9BY43 222 aa19.85■□□□□ 0.77
KCNC1-202ENST00000379472 CT47A1Q5JQC4 288 aaPredicted RBP19.84■□□□□ 0.77
KCNC1-202ENST00000379472 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.77
KCNC1-202ENST00000379472 HDAC5Q9UQL6 1122 aa19.83■□□□□ 0.77
KCNC1-202ENST00000379472 KIF16BQ96L93 1317 aa19.83■□□□□ 0.76
KCNC1-202ENST00000379472 KIF3AQ9Y496 699 aa19.81■□□□□ 0.76
KCNC1-202ENST00000379472 LTV1Q96GA3 475 aaPredicted RBP19.81■□□□□ 0.76
KCNC1-202ENST00000379472 SYNE3Q6ZMZ3 975 aa19.8■□□□□ 0.76
KCNC1-202ENST00000379472 ZFYVE27Q5T4F4 411 aa19.8■□□□□ 0.76
KCNC1-202ENST00000379472 PPP4R2Q9NY27 417 aa19.8■□□□□ 0.76
KCNC1-202ENST00000379472 CCAR1Q8IX12 1150 aaKnown RBP19.79■□□□□ 0.76
KCNC1-202ENST00000379472 WWC2Q6AWC2 1192 aa19.79■□□□□ 0.76
KCNC1-202ENST00000379472 VPS37DQ86XT2 251 aa19.79■□□□□ 0.76
KCNC1-202ENST00000379472 FOXD4L5Q5VV16 416 aaPredicted RBP19.78■□□□□ 0.76
KCNC1-202ENST00000379472 FAM184AQ8NB25 1140 aa19.78■□□□□ 0.76
KCNC1-202ENST00000379472 FOXD4L4Q8WXT5 416 aaPredicted RBP19.78■□□□□ 0.76
KCNC1-202ENST00000379472 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
KCNC1-202ENST00000379472 GGT6Q6P531 493 aa19.77■□□□□ 0.76
KCNC1-202ENST00000379472 PHF14O94880 888 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms