RNA–Protein interactions for RNA: ENST00000378961.8

CHGB-201, Transcript of chromogranin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGB, Length 2,550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-201ENST00000378961 NUP160Q12769 1436 aa17.64■□□□□ 0.41
CHGB-201ENST00000378961 ARHGEF11O15085 1522 aa17.63■□□□□ 0.41
CHGB-201ENST00000378961 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
CHGB-201ENST00000378961 PTPRKQ15262 1439 aa17.61■□□□□ 0.41
CHGB-201ENST00000378961 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
CHGB-201ENST00000378961 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
CHGB-201ENST00000378961 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
CHGB-201ENST00000378961 SALL2Q9Y467 1007 aaPredicted RBP17.6■□□□□ 0.41
CHGB-201ENST00000378961 RTN4Q9NQC3 1192 aaKnown RBP17.6■□□□□ 0.41
CHGB-201ENST00000378961 CCDC184Q52MB2 194 aa17.59■□□□□ 0.41
CHGB-201ENST00000378961 CHIC2Q9UKJ5 165 aa17.58■□□□□ 0.41
CHGB-201ENST00000378961 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
CHGB-201ENST00000378961 HFM1A2PYH4 1435 aa17.57■□□□□ 0.4
CHGB-201ENST00000378961 PLB1Q6P1J6 1458 aa17.56■□□□□ 0.4
CHGB-201ENST00000378961 MIA2Q96PC5 1412 aa17.56■□□□□ 0.4
CHGB-201ENST00000378961 RRP7BPQ9NSQ0 103 aa17.55■□□□□ 0.4
CHGB-201ENST00000378961 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
CHGB-201ENST00000378961 NOP58Q9Y2X3 529 aaKnown RBP17.54■□□□□ 0.4
CHGB-201ENST00000378961 NAIPQ13075 1403 aa17.53■□□□□ 0.4
CHGB-201ENST00000378961 IL27Q8NEV9 243 aa17.52■□□□□ 0.4
CHGB-201ENST00000378961 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.39
CHGB-201ENST00000378961 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
CHGB-201ENST00000378961 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
CHGB-201ENST00000378961 FAM9BQ8IZU0 186 aa17.5■□□□□ 0.39
CHGB-201ENST00000378961 TROQ12816 1431 aaPredicted RBP17.49■□□□□ 0.39
CHGB-201ENST00000378961 UACAQ9BZF9 1416 aa17.49■□□□□ 0.39
CHGB-201ENST00000378961 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.48■□□□□ 0.39
CHGB-201ENST00000378961 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
CHGB-201ENST00000378961 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
CHGB-201ENST00000378961 ZNF644Q9H582 1327 aaPredicted RBP17.46■□□□□ 0.39
CHGB-201ENST00000378961 CFDP1Q9UEE9 299 aaPredicted RBP17.46■□□□□ 0.39
CHGB-201ENST00000378961 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
CHGB-201ENST00000378961 PTPRGP23470 1445 aa17.44■□□□□ 0.38
CHGB-201ENST00000378961 ZNF777Q9ULD5 760 aaPredicted RBP17.43■□□□□ 0.38
CHGB-201ENST00000378961 CHD1O14646 1710 aa17.42■□□□□ 0.38
CHGB-201ENST00000378961 DAPK1P53355 1430 aa17.42■□□□□ 0.38
CHGB-201ENST00000378961 ABCA8O94911 1581 aa17.41■□□□□ 0.38
CHGB-201ENST00000378961 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
CHGB-201ENST00000378961 AKNAQ7Z591 1439 aa17.4■□□□□ 0.38
CHGB-201ENST00000378961 ATP10BO94823 1461 aa17.4■□□□□ 0.38
CHGB-201ENST00000378961 ABCC5O15440 1437 aa17.39■□□□□ 0.37
CHGB-201ENST00000378961 WASHC2AQ641Q2 1341 aa17.38■□□□□ 0.37
CHGB-201ENST00000378961 GCC2Q8IWJ2 1684 aa17.38■□□□□ 0.37
CHGB-201ENST00000378961 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
CHGB-201ENST00000378961 KIF14Q15058 1648 aa17.37■□□□□ 0.37
CHGB-201ENST00000378961 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
CHGB-201ENST00000378961 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
CHGB-201ENST00000378961 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
CHGB-201ENST00000378961 ITSN2Q9NZM3 1697 aa17.35■□□□□ 0.37
CHGB-201ENST00000378961 CAMSAP2Q08AD1 1489 aa17.35■□□□□ 0.37
CHGB-201ENST00000378961 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
CHGB-201ENST00000378961 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
CHGB-201ENST00000378961 ADCY10Q96PN6 1610 aa17.35■□□□□ 0.37
CHGB-201ENST00000378961 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
CHGB-201ENST00000378961 KDM6BO15054 1643 aa17.34■□□□□ 0.37
CHGB-201ENST00000378961 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
CHGB-201ENST00000378961 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
CHGB-201ENST00000378961 C11orf95C9JLR9 678 aaPredicted RBP17.31■□□□□ 0.36
CHGB-201ENST00000378961 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
CHGB-201ENST00000378961 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
CHGB-201ENST00000378961 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
CHGB-201ENST00000378961 SHROOM2Q13796 1616 aa17.28■□□□□ 0.36
CHGB-201ENST00000378961 FOXD1Q16676 465 aa17.27■□□□□ 0.36
CHGB-201ENST00000378961 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
CHGB-201ENST00000378961 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
CHGB-201ENST00000378961 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
CHGB-201ENST00000378961 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
CHGB-201ENST00000378961 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
CHGB-201ENST00000378961 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
CHGB-201ENST00000378961 ERCC6L2Q5T890 1561 aa17.24■□□□□ 0.35
CHGB-201ENST00000378961 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
CHGB-201ENST00000378961 TSPY4P0CV99 314 aa17.24■□□□□ 0.35
CHGB-201ENST00000378961 TSPY10P0CW01 314 aa17.24■□□□□ 0.35
CHGB-201ENST00000378961 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
CHGB-201ENST00000378961 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.35
CHGB-201ENST00000378961 ADGBQ8N7X0 1667 aa17.2■□□□□ 0.34
CHGB-201ENST00000378961 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
CHGB-201ENST00000378961 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
CHGB-201ENST00000378961 NEFMP07197 916 aa17.19■□□□□ 0.34
CHGB-201ENST00000378961 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
CHGB-201ENST00000378961 ABCC2Q92887 1545 aa17.18■□□□□ 0.34
CHGB-201ENST00000378961 CROCC2H7BZ55 1655 aa17.18■□□□□ 0.34
CHGB-201ENST00000378961 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
CHGB-201ENST00000378961 C9orf84Q5VXU9 1444 aa17.17■□□□□ 0.34
CHGB-201ENST00000378961 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
CHGB-201ENST00000378961 ANKRD30BQ9BXX2 1392 aa17.16■□□□□ 0.34
CHGB-201ENST00000378961 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
CHGB-201ENST00000378961 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHGB-201ENST00000378961 L3MBTL2Q969R5 705 aa17.16■□□□□ 0.34
CHGB-201ENST00000378961 SKAP1Q86WV1 359 aa17.15■□□□□ 0.34
CHGB-201ENST00000378961 KDM5BQ9UGL1 1544 aa17.15■□□□□ 0.34
CHGB-201ENST00000378961 CNTLNQ9NXG0 1405 aa17.15■□□□□ 0.34
CHGB-201ENST00000378961 SHANK2Q9UPX8 1470 aa17.14■□□□□ 0.33
CHGB-201ENST00000378961 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
CHGB-201ENST00000378961 PZPP20742 1482 aa17.12■□□□□ 0.33
CHGB-201ENST00000378961 PKD2Q13563 968 aa17.12■□□□□ 0.33
CHGB-201ENST00000378961 ARHGAP5Q13017 1502 aa17.11■□□□□ 0.33
CHGB-201ENST00000378961 PREX2Q70Z35 1606 aa17.11■□□□□ 0.33
CHGB-201ENST00000378961 CDC42BPBQ9Y5S2 1711 aa17.11■□□□□ 0.33
CHGB-201ENST00000378961 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms