RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 DENND4BO75064 1496 aaPredicted RBP37.92■■■■□ 3.66
SDHAF1-201ENST00000378887 GPATCH8Q9UKJ3 1502 aaKnown RBP37.92■■■■□ 3.66
SDHAF1-201ENST00000378887 ADGRL1O94910 1474 aa37.9■■■■□ 3.66
SDHAF1-201ENST00000378887 ARHGAP5Q13017 1502 aa37.88■■■■□ 3.65
SDHAF1-201ENST00000378887 POGZQ7Z3K3 1410 aa37.87■■■■□ 3.65
SDHAF1-201ENST00000378887 MAP3K1Q13233 1512 aa37.87■■■■□ 3.65
SDHAF1-201ENST00000378887 ARHGEF12Q9NZN5 1544 aa37.86■■■■□ 3.65
SDHAF1-201ENST00000378887 ABCC1P33527 1531 aa37.84■■■■□ 3.65
SDHAF1-201ENST00000378887 SCAPERQ9BY12 1400 aa37.84■■■■□ 3.65
SDHAF1-201ENST00000378887 MTUS2Q5JR59 1369 aa37.83■■■■□ 3.65
SDHAF1-201ENST00000378887 EFCAB2Q5VUJ9 269 aa37.82■■■■□ 3.64
SDHAF1-201ENST00000378887 ARHGEF40Q8TER5 1519 aa37.82■■■■□ 3.64
SDHAF1-201ENST00000378887 KDM4FA0A1W2PPD8 638 aa37.81■■■■□ 3.64
SDHAF1-201ENST00000378887 SAMD9LQ8IVG5 1584 aa37.8■■■■□ 3.64
SDHAF1-201ENST00000378887 KDM5CP41229 1560 aa37.8■■■■□ 3.64
SDHAF1-201ENST00000378887 LRRC9Q6ZRR7 1453 aa37.78■■■■□ 3.64
SDHAF1-201ENST00000378887 SIGLEC1Q9BZZ2 1709 aa37.77■■■■□ 3.64
SDHAF1-201ENST00000378887 ITSN2Q9NZM3 1697 aa37.76■■■■□ 3.64
SDHAF1-201ENST00000378887 NCOA2Q15596 1464 aa37.72■■■■□ 3.63
SDHAF1-201ENST00000378887 YEATS2Q9ULM3 1422 aa37.72■■■■□ 3.63
SDHAF1-201ENST00000378887 SUPT6HQ7KZ85 1726 aaKnown RBP37.71■■■■□ 3.63
SDHAF1-201ENST00000378887 TRAPPC8Q9Y2L5 1435 aa37.7■■■■□ 3.62
SDHAF1-201ENST00000378887 KANK4Q5T7N3 995 aaPredicted RBP37.69■■■■□ 3.62
SDHAF1-201ENST00000378887 MAGI2Q86UL8 1455 aa37.69■■■■□ 3.62
SDHAF1-201ENST00000378887 ZNF518AQ6AHZ1 1483 aa37.67■■■■□ 3.62
SDHAF1-201ENST00000378887 ZFYVE16Q7Z3T8 1539 aa37.66■■■■□ 3.62
SDHAF1-201ENST00000378887 CCNB3Q8WWL7 1395 aa37.65■■■■□ 3.62
SDHAF1-201ENST00000378887 SYCP2Q9BX26 1530 aa37.62■■■■□ 3.61
SDHAF1-201ENST00000378887 AFAP1Q8N556 730 aa37.6■■■■□ 3.61
SDHAF1-201ENST00000378887 KIAA1107Q9UPP5 1409 aa37.59■■■■□ 3.61
SDHAF1-201ENST00000378887 HECW2Q9P2P5 1572 aa37.58■■■■□ 3.61
SDHAF1-201ENST00000378887 MLH3Q9UHC1 1453 aa37.58■■■■□ 3.61
SDHAF1-201ENST00000378887 DIP2CQ9Y2E4 1556 aa37.55■■■■□ 3.6
SDHAF1-201ENST00000378887 KIDINS220Q9ULH0 1771 aa37.55■■■■□ 3.6
SDHAF1-201ENST00000378887 MBD5Q9P267 1494 aa37.55■■■■□ 3.6
SDHAF1-201ENST00000378887 ADAMTSL3P82987 1691 aa37.55■■■■□ 3.6
SDHAF1-201ENST00000378887 ABCA6Q8N139 1617 aa37.54■■■■□ 3.6
SDHAF1-201ENST00000378887 ZNF644Q9H582 1327 aaPredicted RBP37.53■■■■□ 3.6
SDHAF1-201ENST00000378887 BCORL1Q5H9F3 1711 aa37.53■■■■□ 3.6
SDHAF1-201ENST00000378887 CFDP1Q9UEE9 299 aaPredicted RBP37.52■■■■□ 3.6
SDHAF1-201ENST00000378887 PLEKHH2Q8IVE3 1493 aa37.5■■■■□ 3.59
SDHAF1-201ENST00000378887 REREQ9P2R6 1566 aa37.47■■■■□ 3.59
SDHAF1-201ENST00000378887 INO80Q9ULG1 1556 aaPredicted RBP37.46■■■■□ 3.59
SDHAF1-201ENST00000378887 ATP10AO60312 1499 aa37.46■■■■□ 3.59
SDHAF1-201ENST00000378887 HNRNPMP52272 730 aaKnown RBP eCLIP37.43■■■■□ 3.58
SDHAF1-201ENST00000378887 ZNF777Q9ULD5 760 aaPredicted RBP37.43■■■■□ 3.58
SDHAF1-201ENST00000378887 CAMSAP2Q08AD1 1489 aa37.43■■■■□ 3.58
SDHAF1-201ENST00000378887 C9orf84Q5VXU9 1444 aa37.42■■■■□ 3.58
SDHAF1-201ENST00000378887 MYOM3Q5VTT5 1437 aa37.38■■■■□ 3.57
SDHAF1-201ENST00000378887 MADDQ8WXG6 1647 aa37.36■■■■□ 3.57
SDHAF1-201ENST00000378887 ATP7AQ04656 1500 aa37.35■■■■□ 3.57
SDHAF1-201ENST00000378887 ARHGEF5Q12774 1597 aa37.34■■■■□ 3.57
SDHAF1-201ENST00000378887 MIA2Q96PC5 1412 aa37.32■■■■□ 3.56
SDHAF1-201ENST00000378887 AGLP35573 1532 aa37.31■■■■□ 3.56
SDHAF1-201ENST00000378887 PLXNC1O60486 1568 aa37.3■■■■□ 3.56
SDHAF1-201ENST00000378887 AEBP2Q6ZN18 517 aaPredicted RBP37.3■■■■□ 3.56
SDHAF1-201ENST00000378887 CCDC141Q6ZP82 1450 aa37.26■■■■□ 3.56
SDHAF1-201ENST00000378887 SPAG9O60271 1321 aaKnown RBP37.23■■■■□ 3.55
SDHAF1-201ENST00000378887 PTPRMP28827 1452 aa37.23■■■■□ 3.55
SDHAF1-201ENST00000378887 RTEL1-TNFRSF6BF6WH68 1400 aa37.21■■■■□ 3.55
SDHAF1-201ENST00000378887 ADGBQ8N7X0 1667 aa37.2■■■■□ 3.55
SDHAF1-201ENST00000378887 TCOF1Q13428 1488 aaKnown RBP37.2■■■■□ 3.54
SDHAF1-201ENST00000378887 RIMS1Q86UR5 1692 aaKnown RBP37.18■■■■□ 3.54
SDHAF1-201ENST00000378887 FGD6Q6ZV73 1430 aa37.18■■■■□ 3.54
SDHAF1-201ENST00000378887 PTPN23Q9H3S7 1636 aa37.18■■■■□ 3.54
SDHAF1-201ENST00000378887 ARID4BQ4LE39 1312 aaPredicted RBP37.17■■■■□ 3.54
SDHAF1-201ENST00000378887 MAST1Q9Y2H9 1570 aa37.17■■■■□ 3.54
SDHAF1-201ENST00000378887 APLP2Q06481 763 aa37.16■■■■□ 3.54
SDHAF1-201ENST00000378887 FER1L4A9Z1Z3 1794 aa37.16■■■■□ 3.54
SDHAF1-201ENST00000378887 A2MP01023 1474 aa37.12■■■■□ 3.53
SDHAF1-201ENST00000378887 CROCC2H7BZ55 1655 aa37.09■■■■□ 3.53
SDHAF1-201ENST00000378887 RSPH4AQ5TD94 716 aa37.07■■■■□ 3.52
SDHAF1-201ENST00000378887 ABCC5O15440 1437 aa37.05■■■■□ 3.52
SDHAF1-201ENST00000378887 DNMT1P26358 1616 aaKnown RBP37.04■■■■□ 3.52
SDHAF1-201ENST00000378887 MLECQ14165 292 aa37.02■■■■□ 3.52
SDHAF1-201ENST00000378887 MYT1LQ9UL68 1186 aa37.01■■■■□ 3.52
SDHAF1-201ENST00000378887 SHANK2Q9UPX8 1470 aa37■■■■□ 3.51
SDHAF1-201ENST00000378887 DHX29Q7Z478 1369 aaKnown RBP36.98■■■■□ 3.51
SDHAF1-201ENST00000378887 DAPK1P53355 1430 aa36.95■■■■□ 3.51
SDHAF1-201ENST00000378887 C3P01024 1663 aa36.9■■■■□ 3.5
SDHAF1-201ENST00000378887 MROH2AA6NES4 1674 aa36.87■■■■□ 3.49
SDHAF1-201ENST00000378887 LMTK3Q96Q04 1460 aa36.84■■■■□ 3.49
SDHAF1-201ENST00000378887 TSPY4P0CV99 314 aa36.84■■■■□ 3.49
SDHAF1-201ENST00000378887 TSPY10P0CW01 314 aa36.84■■■■□ 3.49
SDHAF1-201ENST00000378887 RNF17Q9BXT8 1623 aaKnown RBP36.84■■■■□ 3.49
SDHAF1-201ENST00000378887 MROH1Q8NDA8 1641 aa36.83■■■■□ 3.49
SDHAF1-201ENST00000378887 EIF2AK4Q9P2K8 1649 aaKnown RBP36.81■■■■□ 3.48
SDHAF1-201ENST00000378887 PTPRKQ15262 1439 aa36.81■■■■□ 3.48
SDHAF1-201ENST00000378887 CLTCQ00610 1675 aaKnown RBP36.8■■■■□ 3.48
SDHAF1-201ENST00000378887 PPARGC1BQ86YN6 1023 aaKnown RBP36.8■■■■□ 3.48
SDHAF1-201ENST00000378887 ADGRL2O95490 1459 aa36.8■■■■□ 3.48
SDHAF1-201ENST00000378887 CNTLNQ9NXG0 1405 aa36.79■■■■□ 3.48
SDHAF1-201ENST00000378887 CEBPAP49715 358 aaPredicted RBP36.78■■■■□ 3.48
SDHAF1-201ENST00000378887 DUOX2Q9NRD8 1548 aa36.78■■■■□ 3.48
SDHAF1-201ENST00000378887 NCOA1Q15788 1441 aa36.74■■■■□ 3.47
SDHAF1-201ENST00000378887 FAM135AQ9P2D6 1515 aa36.73■■■■□ 3.47
SDHAF1-201ENST00000378887 KIF15Q9NS87 1388 aa36.72■■■■□ 3.47
SDHAF1-201ENST00000378887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.7■■■■□ 3.47
SDHAF1-201ENST00000378887 RRBP1Q9P2E9 1410 aaKnown RBP36.68■■■■□ 3.46
SDHAF1-201ENST00000378887 PREX1Q8TCU6 1659 aa36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms