RNA–Protein interactions for RNA: ENST00000378723.7

DMD-212, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 4,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-212ENST00000378723 CYB5RLQ6IPT4 315 aa13.13□□□□□ -0.31
DMD-212ENST00000378723 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
DMD-212ENST00000378723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.13□□□□□ -0.31
DMD-212ENST00000378723 UACAQ9BZF9 1416 aa13.13□□□□□ -0.31
DMD-212ENST00000378723 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
DMD-212ENST00000378723 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
DMD-212ENST00000378723 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
DMD-212ENST00000378723 NEFLP07196 543 aa13.1□□□□□ -0.31
DMD-212ENST00000378723 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
DMD-212ENST00000378723 NUP160Q12769 1436 aa13.1□□□□□ -0.31
DMD-212ENST00000378723 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
DMD-212ENST00000378723 DISP1Q96F81 1524 aa13.09□□□□□ -0.31
DMD-212ENST00000378723 SAMD9Q5K651 1589 aa13.08□□□□□ -0.31
DMD-212ENST00000378723 NUP153P49790 1475 aaKnown RBP13.08□□□□□ -0.32
DMD-212ENST00000378723 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
DMD-212ENST00000378723 L3MBTL2Q969R5 705 aa13.07□□□□□ -0.32
DMD-212ENST00000378723 RAPGEF6Q8TEU7 1601 aa13.07□□□□□ -0.32
DMD-212ENST00000378723 DCAF11Q8TEB1 546 aa13.06□□□□□ -0.32
DMD-212ENST00000378723 CFAP43Q8NDM7 1665 aa13.06□□□□□ -0.32
DMD-212ENST00000378723 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
DMD-212ENST00000378723 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
DMD-212ENST00000378723 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
DMD-212ENST00000378723 ARHGEF11O15085 1522 aa13.05□□□□□ -0.32
DMD-212ENST00000378723 KIF15Q9NS87 1388 aa13.04□□□□□ -0.32
DMD-212ENST00000378723 DAPK1P53355 1430 aa13.04□□□□□ -0.32
DMD-212ENST00000378723 NAIPQ13075 1403 aa13.04□□□□□ -0.32
DMD-212ENST00000378723 ARHGAP5Q13017 1502 aa13.04□□□□□ -0.32
DMD-212ENST00000378723 CARD11Q9BXL7 1154 aa13.04□□□□□ -0.32
DMD-212ENST00000378723 KIF3BO15066 747 aa13.04□□□□□ -0.32
DMD-212ENST00000378723 GGT6Q6P531 493 aa13.03□□□□□ -0.32
DMD-212ENST00000378723 ANKRD50Q9ULJ7 1429 aa13.03□□□□□ -0.32
DMD-212ENST00000378723 KANK1Q14678 1352 aa13.03□□□□□ -0.32
DMD-212ENST00000378723 ATP10BO94823 1461 aa13.02□□□□□ -0.32
DMD-212ENST00000378723 HSPA5P11021 654 aaKnown RBP13.01□□□□□ -0.33
DMD-212ENST00000378723 AFAP1Q8N556 730 aa13.01□□□□□ -0.33
DMD-212ENST00000378723 GTF3C3Q9Y5Q9 886 aa13.01□□□□□ -0.33
DMD-212ENST00000378723 PLPPR3Q6T4P5 718 aa13□□□□□ -0.33
DMD-212ENST00000378723 BCANQ96GW7 911 aa13□□□□□ -0.33
DMD-212ENST00000378723 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
DMD-212ENST00000378723 ABCC5O15440 1437 aa12.99□□□□□ -0.33
DMD-212ENST00000378723 PTPRKQ15262 1439 aa12.99□□□□□ -0.33
DMD-212ENST00000378723 CAMSAP2Q08AD1 1489 aa12.99□□□□□ -0.33
DMD-212ENST00000378723 SENP3Q9H4L4 574 aaPredicted RBP12.98□□□□□ -0.33
DMD-212ENST00000378723 KIF14Q15058 1648 aa12.98□□□□□ -0.33
DMD-212ENST00000378723 GPATCH8Q9UKJ3 1502 aaKnown RBP12.97□□□□□ -0.33
DMD-212ENST00000378723 ROCK1Q13464 1354 aa12.96□□□□□ -0.34
DMD-212ENST00000378723 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
DMD-212ENST00000378723 MLECQ14165 292 aa12.93□□□□□ -0.34
DMD-212ENST00000378723 MAGI3Q5TCQ9 1506 aa12.93□□□□□ -0.34
DMD-212ENST00000378723 FAM9BQ8IZU0 186 aa12.93□□□□□ -0.34
DMD-212ENST00000378723 FAM69CQ0P6D2 419 aa12.92□□□□□ -0.34
DMD-212ENST00000378723 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
DMD-212ENST00000378723 AKNAQ7Z591 1439 aa12.92□□□□□ -0.34
DMD-212ENST00000378723 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
DMD-212ENST00000378723 CCDC144AA2RUR9 1427 aa12.92□□□□□ -0.34
DMD-212ENST00000378723 HNRNPUQ00839 825 aaKnown RBP eCLIP12.91□□□□□ -0.34
DMD-212ENST00000378723 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
DMD-212ENST00000378723 NCOA1Q15788 1441 aa12.91□□□□□ -0.34
DMD-212ENST00000378723 CCDC141Q6ZP82 1450 aa12.9□□□□□ -0.34
DMD-212ENST00000378723 WASHC2CQ9Y4E1 1318 aa12.89□□□□□ -0.35
DMD-212ENST00000378723 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
DMD-212ENST00000378723 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
DMD-212ENST00000378723 SCAPERQ9BY12 1400 aa12.87□□□□□ -0.35
DMD-212ENST00000378723 TMC1Q8TDI8 760 aa12.87□□□□□ -0.35
DMD-212ENST00000378723 CHD1O14646 1710 aa12.87□□□□□ -0.35
DMD-212ENST00000378723 KIAA1107Q9UPP5 1409 aa12.86□□□□□ -0.35
DMD-212ENST00000378723 ITSN2Q9NZM3 1697 aa12.85□□□□□ -0.35
DMD-212ENST00000378723 ABCC2Q92887 1545 aa12.85□□□□□ -0.35
DMD-212ENST00000378723 MAPKBP1O60336 1514 aa12.84□□□□□ -0.35
DMD-212ENST00000378723 RAPGEF3O95398 923 aa12.82□□□□□ -0.36
DMD-212ENST00000378723 ABCA8O94911 1581 aa12.82□□□□□ -0.36
DMD-212ENST00000378723 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
DMD-212ENST00000378723 TMF1P82094 1093 aa12.81□□□□□ -0.36
DMD-212ENST00000378723 CDCA8Q53HL2 280 aa12.81□□□□□ -0.36
DMD-212ENST00000378723 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
DMD-212ENST00000378723 PLCH2O75038 1416 aa12.81□□□□□ -0.36
DMD-212ENST00000378723 ASXL2Q76L83 1435 aa12.8□□□□□ -0.36
DMD-212ENST00000378723 ST20-MTHFSA0A0A6YYL1 179 aa12.8□□□□□ -0.36
DMD-212ENST00000378723 NBPF8Q3BBV2 869 aa12.8□□□□□ -0.36
DMD-212ENST00000378723 USP47Q96K76 1375 aa12.79□□□□□ -0.36
DMD-212ENST00000378723 FANCAO15360 1455 aa12.79□□□□□ -0.36
DMD-212ENST00000378723 ADGRL1O94910 1474 aa12.79□□□□□ -0.36
DMD-212ENST00000378723 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
DMD-212ENST00000378723 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
DMD-212ENST00000378723 SYCP2Q9BX26 1530 aa12.78□□□□□ -0.36
DMD-212ENST00000378723 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
DMD-212ENST00000378723 CCER2I3L3R5 266 aa12.77□□□□□ -0.36
DMD-212ENST00000378723 NUTM2DQ5VT03 806 aaPredicted RBP12.77□□□□□ -0.36
DMD-212ENST00000378723 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
DMD-212ENST00000378723 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.37
DMD-212ENST00000378723 DNMT1P26358 1616 aaKnown RBP12.76□□□□□ -0.37
DMD-212ENST00000378723 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
DMD-212ENST00000378723 CC2D1BQ5T0F9 858 aaKnown RBP12.74□□□□□ -0.37
DMD-212ENST00000378723 POGKQ9P215 609 aa12.73□□□□□ -0.37
DMD-212ENST00000378723 TRAPPC8Q9Y2L5 1435 aa12.73□□□□□ -0.37
DMD-212ENST00000378723 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
DMD-212ENST00000378723 SAFB2Q14151 953 aaKnown RBP eCLIP12.73□□□□□ -0.37
DMD-212ENST00000378723 STK26Q9P289 416 aa12.72□□□□□ -0.37
DMD-212ENST00000378723 FKBP8Q14318 412 aa12.72□□□□□ -0.37
DMD-212ENST00000378723 WASHC2AQ641Q2 1341 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms