RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 EHMT2Q96KQ7 1210 aa32.54■■■□□ 2.8
CCDC107-202ENST00000378406 ARHGAP35Q9NRY4 1499 aa32.54■■■□□ 2.8
CCDC107-202ENST00000378406 ATP1B4Q9UN42 357 aaPredicted RBP32.51■■■□□ 2.79
CCDC107-202ENST00000378406 HSPA2P54652 639 aa32.5■■■□□ 2.79
CCDC107-202ENST00000378406 PLPPR3Q6T4P5 718 aa32.5■■■□□ 2.79
CCDC107-202ENST00000378406 MYO5CQ9NQX4 1742 aa32.5■■■□□ 2.79
CCDC107-202ENST00000378406 MLECQ14165 292 aa32.49■■■□□ 2.79
CCDC107-202ENST00000378406 FER1L4A9Z1Z3 1794 aa32.47■■■□□ 2.79
CCDC107-202ENST00000378406 EFCAB2Q5VUJ9 269 aa32.47■■■□□ 2.79
CCDC107-202ENST00000378406 KIF14Q15058 1648 aa32.46■■■□□ 2.79
CCDC107-202ENST00000378406 ATP10AO60312 1499 aa32.45■■■□□ 2.79
CCDC107-202ENST00000378406 CDK11AQ9UQ88 783 aaPredicted RBP32.44■■■□□ 2.78
CCDC107-202ENST00000378406 C9orf84Q5VXU9 1444 aa32.42■■■□□ 2.78
CCDC107-202ENST00000378406 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
CCDC107-202ENST00000378406 TROQ12816 1431 aaPredicted RBP32.41■■■□□ 2.78
CCDC107-202ENST00000378406 LRRIQ1Q96JM4 1722 aa32.37■■■□□ 2.77
CCDC107-202ENST00000378406 ZNF518AQ6AHZ1 1483 aa32.36■■■□□ 2.77
CCDC107-202ENST00000378406 ARHGAP5Q13017 1502 aa32.35■■■□□ 2.77
CCDC107-202ENST00000378406 KDM5CP41229 1560 aa32.34■■■□□ 2.77
CCDC107-202ENST00000378406 CHIC1Q5VXU3 224 aa32.33■■■□□ 2.77
CCDC107-202ENST00000378406 CLIP1P30622 1438 aa32.33■■■□□ 2.77
CCDC107-202ENST00000378406 AFAP1Q8N556 730 aa32.31■■■□□ 2.76
CCDC107-202ENST00000378406 PREX1Q8TCU6 1659 aa32.27■■■□□ 2.76
CCDC107-202ENST00000378406 CDC42BPBQ9Y5S2 1711 aa32.26■■■□□ 2.76
CCDC107-202ENST00000378406 CEBPAP49715 358 aaPredicted RBP32.26■■■□□ 2.75
CCDC107-202ENST00000378406 DIP2CQ9Y2E4 1556 aa32.25■■■□□ 2.75
CCDC107-202ENST00000378406 REREQ9P2R6 1566 aa32.21■■■□□ 2.75
CCDC107-202ENST00000378406 CERKQ8TCT0 537 aa32.21■■■□□ 2.75
CCDC107-202ENST00000378406 PREX2Q70Z35 1606 aa32.19■■■□□ 2.74
CCDC107-202ENST00000378406 ABCA6Q8N139 1617 aa32.19■■■□□ 2.74
CCDC107-202ENST00000378406 MLH3Q9UHC1 1453 aa32.19■■■□□ 2.74
CCDC107-202ENST00000378406 MYT1LQ9UL68 1186 aa32.19■■■□□ 2.74
CCDC107-202ENST00000378406 CASKIN1Q8WXD9 1431 aa32.18■■■□□ 2.74
CCDC107-202ENST00000378406 CCDC18Q5T9S5 1454 aa32.17■■■□□ 2.74
CCDC107-202ENST00000378406 ABCC1P33527 1531 aa32.16■■■□□ 2.74
CCDC107-202ENST00000378406 TRAPPC8Q9Y2L5 1435 aa32.16■■■□□ 2.74
CCDC107-202ENST00000378406 ITSN2Q9NZM3 1697 aa32.12■■■□□ 2.73
CCDC107-202ENST00000378406 AGLP35573 1532 aa32.11■■■□□ 2.73
CCDC107-202ENST00000378406 UHRF1BP1Q6BDS2 1440 aa32.11■■■□□ 2.73
CCDC107-202ENST00000378406 SETD1BQ9UPS6 1966 aaKnown RBP32.11■■■□□ 2.73
CCDC107-202ENST00000378406 STRCQ7RTU9 1775 aa32.11■■■□□ 2.73
CCDC107-202ENST00000378406 CDC42BPAQ5VT25 1732 aa32.08■■■□□ 2.73
CCDC107-202ENST00000378406 C3P01024 1663 aa32.08■■■□□ 2.73
CCDC107-202ENST00000378406 KIDINS220Q9ULH0 1771 aa32.07■■■□□ 2.72
CCDC107-202ENST00000378406 DMRT2Q9Y5R5 561 aa32.03■■■□□ 2.72
CCDC107-202ENST00000378406 FYCO1Q9BQS8 1478 aa32.03■■■□□ 2.72
CCDC107-202ENST00000378406 ESF1Q9H501 851 aaKnown RBP31.98■■■□□ 2.71
CCDC107-202ENST00000378406 SAMD9LQ8IVG5 1584 aa31.98■■■□□ 2.71
CCDC107-202ENST00000378406 CNTLNQ9NXG0 1405 aa31.94■■■□□ 2.7
CCDC107-202ENST00000378406 GPATCH8Q9UKJ3 1502 aaKnown RBP31.94■■■□□ 2.7
CCDC107-202ENST00000378406 ZNF777Q9ULD5 760 aaPredicted RBP31.93■■■□□ 2.7
CCDC107-202ENST00000378406 SYCP2Q9BX26 1530 aa31.93■■■□□ 2.7
CCDC107-202ENST00000378406 PTPRTO14522 1441 aa31.92■■■□□ 2.7
CCDC107-202ENST00000378406 SPAG9O60271 1321 aaKnown RBP31.87■■■□□ 2.69
CCDC107-202ENST00000378406 HNRNPMP52272 730 aaKnown RBP eCLIP31.87■■■□□ 2.69
CCDC107-202ENST00000378406 MROH2AA6NES4 1674 aa31.86■■■□□ 2.69
CCDC107-202ENST00000378406 SUPT6HQ7KZ85 1726 aaKnown RBP31.83■■■□□ 2.69
CCDC107-202ENST00000378406 NPATQ14207 1427 aa31.83■■■□□ 2.69
CCDC107-202ENST00000378406 NCOA1Q15788 1441 aa31.83■■■□□ 2.69
CCDC107-202ENST00000378406 KIAA1107Q9UPP5 1409 aa31.83■■■□□ 2.69
CCDC107-202ENST00000378406 ATP7AQ04656 1500 aa31.82■■■□□ 2.68
CCDC107-202ENST00000378406 INO80Q9ULG1 1556 aaPredicted RBP31.81■■■□□ 2.68
CCDC107-202ENST00000378406 ZMYM3Q14202 1370 aa31.81■■■□□ 2.68
CCDC107-202ENST00000378406 CFDP1Q9UEE9 299 aaPredicted RBP31.8■■■□□ 2.68
CCDC107-202ENST00000378406 PLEKHH2Q8IVE3 1493 aa31.79■■■□□ 2.68
CCDC107-202ENST00000378406 LTBP4Q8N2S1 1624 aa31.79■■■□□ 2.68
CCDC107-202ENST00000378406 PLXNC1O60486 1568 aa31.79■■■□□ 2.68
CCDC107-202ENST00000378406 CCNB3Q8WWL7 1395 aa31.78■■■□□ 2.68
CCDC107-202ENST00000378406 A2MP01023 1474 aa31.75■■■□□ 2.67
CCDC107-202ENST00000378406 CAMSAP1Q5T5Y3 1602 aa31.75■■■□□ 2.67
CCDC107-202ENST00000378406 CLTCQ00610 1675 aaKnown RBP31.73■■■□□ 2.67
CCDC107-202ENST00000378406 MTUS2Q5JR59 1369 aa31.72■■■□□ 2.67
CCDC107-202ENST00000378406 IQSEC2Q5JU85 1478 aa31.67■■■□□ 2.66
CCDC107-202ENST00000378406 PTPRKQ15262 1439 aa31.66■■■□□ 2.66
CCDC107-202ENST00000378406 TIAM1Q13009 1591 aa31.66■■■□□ 2.66
CCDC107-202ENST00000378406 MYO3AQ8NEV4 1616 aa31.66■■■□□ 2.66
CCDC107-202ENST00000378406 ZNF142P52746 1687 aaPredicted RBP31.66■■■□□ 2.66
CCDC107-202ENST00000378406 DISP3Q9P2K9 1392 aa31.66■■■□□ 2.66
CCDC107-202ENST00000378406 GGT6Q6P531 493 aa31.65■■■□□ 2.66
CCDC107-202ENST00000378406 ZNF644Q9H582 1327 aaPredicted RBP31.65■■■□□ 2.66
CCDC107-202ENST00000378406 ADGBQ8N7X0 1667 aa31.64■■■□□ 2.66
CCDC107-202ENST00000378406 NCKAP5LQ9HCH0 1330 aa31.64■■■□□ 2.66
CCDC107-202ENST00000378406 MBD5Q9P267 1494 aa31.63■■■□□ 2.65
CCDC107-202ENST00000378406 EHBP1L1Q8N3D4 1523 aa31.61■■■□□ 2.65
CCDC107-202ENST00000378406 CEP170BQ9Y4F5 1589 aaPredicted RBP31.6■■■□□ 2.65
CCDC107-202ENST00000378406 PLA2R1Q13018 1463 aa31.6■■■□□ 2.65
CCDC107-202ENST00000378406 ILDR2Q71H61 639 aa31.59■■■□□ 2.65
CCDC107-202ENST00000378406 PPP6R1Q9UPN7 881 aa31.59■■■□□ 2.65
CCDC107-202ENST00000378406 TCOF1Q13428 1488 aaKnown RBP31.56■■■□□ 2.64
CCDC107-202ENST00000378406 RTEL1-TNFRSF6BF6WH68 1400 aa31.56■■■□□ 2.64
CCDC107-202ENST00000378406 CEP162Q5TB80 1403 aa31.56■■■□□ 2.64
CCDC107-202ENST00000378406 ZNF335Q9H4Z2 1342 aaPredicted RBP31.55■■■□□ 2.64
CCDC107-202ENST00000378406 PKD2Q13563 968 aa31.55■■■□□ 2.64
CCDC107-202ENST00000378406 DHX29Q7Z478 1369 aaKnown RBP31.51■■■□□ 2.63
CCDC107-202ENST00000378406 SPATA31D1Q6ZQQ2 1576 aa31.51■■■□□ 2.63
CCDC107-202ENST00000378406 A2ML1A8K2U0 1454 aa31.47■■■□□ 2.63
CCDC107-202ENST00000378406 DNMT1P26358 1616 aaKnown RBP31.45■■■□□ 2.62
CCDC107-202ENST00000378406 CCDC141Q6ZP82 1450 aa31.44■■■□□ 2.62
CCDC107-202ENST00000378406 NCOA2Q15596 1464 aa31.43■■■□□ 2.62
CCDC107-202ENST00000378406 CAMSAP2Q08AD1 1489 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms