RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 NAP1L2Q9ULW6 460 aaPredicted RBP18.99■□□□□ 0.63
EXT1-201ENST00000378204 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
EXT1-201ENST00000378204 MCCP23508 829 aa18.98■□□□□ 0.63
EXT1-201ENST00000378204 TAOK2Q9UL54 1235 aa18.97■□□□□ 0.63
EXT1-201ENST00000378204 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
EXT1-201ENST00000378204 APPP05067 770 aa18.95■□□□□ 0.62
EXT1-201ENST00000378204 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
EXT1-201ENST00000378204 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
EXT1-201ENST00000378204 SRPK2P78362 688 aaKnown RBP18.91■□□□□ 0.62
EXT1-201ENST00000378204 A0A0U1RQG5 324 aaPredicted RBP18.91■□□□□ 0.62
EXT1-201ENST00000378204 BAZ1AQ9NRL2 1556 aaPredicted RBP18.9■□□□□ 0.62
EXT1-201ENST00000378204 CCER2I3L3R5 266 aa18.9■□□□□ 0.62
EXT1-201ENST00000378204 MORC1Q86VD1 984 aa18.89■□□□□ 0.62
EXT1-201ENST00000378204 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
EXT1-201ENST00000378204 RTF1Q92541 710 aaKnown RBP18.87■□□□□ 0.61
EXT1-201ENST00000378204 IPO8O15397 1037 aaKnown RBP18.87■□□□□ 0.61
EXT1-201ENST00000378204 SETQ01105 290 aaPredicted RBP18.87■□□□□ 0.61
EXT1-201ENST00000378204 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
EXT1-201ENST00000378204 DRC7Q8IY82 874 aa18.84■□□□□ 0.61
EXT1-201ENST00000378204 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
EXT1-201ENST00000378204 KIAA1211Q6ZU35 1233 aa18.83■□□□□ 0.61
EXT1-201ENST00000378204 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.61
EXT1-201ENST00000378204 SETD5Q9C0A6 1442 aa18.83■□□□□ 0.61
EXT1-201ENST00000378204 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
EXT1-201ENST00000378204 SOX12O15370 315 aa18.81■□□□□ 0.6
EXT1-201ENST00000378204 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
EXT1-201ENST00000378204 KIAA2012Q0VF49 1180 aa18.81■□□□□ 0.6
EXT1-201ENST00000378204 GNL2Q13823 731 aaKnown RBP18.79■□□□□ 0.6
EXT1-201ENST00000378204 ARID3AQ99856 593 aa18.79■□□□□ 0.6
EXT1-201ENST00000378204 GBP4Q96PP9 640 aa18.78■□□□□ 0.6
EXT1-201ENST00000378204 HDGFL2Q7Z4V5 671 aaPredicted RBP18.78■□□□□ 0.6
EXT1-201ENST00000378204 SPRYD3Q8NCJ5 442 aa18.77■□□□□ 0.6
EXT1-201ENST00000378204 CUX2O14529 1486 aa18.77■□□□□ 0.6
EXT1-201ENST00000378204 SAFB2Q14151 953 aaKnown RBP eCLIP18.76■□□□□ 0.59
EXT1-201ENST00000378204 CHMP4AQ9BY43 222 aa18.75■□□□□ 0.59
EXT1-201ENST00000378204 RCAN3Q9UKA8 241 aa18.75■□□□□ 0.59
EXT1-201ENST00000378204 GOLGA6L3A6NEY3 463 aa18.74■□□□□ 0.59
EXT1-201ENST00000378204 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
EXT1-201ENST00000378204 GOLGA6L1Q8N7Z2 621 aa18.74■□□□□ 0.59
EXT1-201ENST00000378204 RALBP1Q15311 655 aa18.73■□□□□ 0.59
EXT1-201ENST00000378204 RWDD1Q9H446 243 aaPredicted RBP18.73■□□□□ 0.59
EXT1-201ENST00000378204 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
EXT1-201ENST00000378204 USP35Q9P2H5 1018 aa18.72■□□□□ 0.59
EXT1-201ENST00000378204 PKD2Q13563 968 aa18.72■□□□□ 0.59
EXT1-201ENST00000378204 MLECQ14165 292 aa18.71■□□□□ 0.59
EXT1-201ENST00000378204 HTATSF1O43719 755 aaKnown RBP18.71■□□□□ 0.59
EXT1-201ENST00000378204 STK26Q9P289 416 aa18.71■□□□□ 0.59
EXT1-201ENST00000378204 VPS8Q8N3P4 1428 aa18.71■□□□□ 0.59
EXT1-201ENST00000378204 U2AF1L5P0DN76 240 aaPredicted RBP18.71■□□□□ 0.58
EXT1-201ENST00000378204 U2AF1Q01081 240 aaKnown RBP eCLIP18.71■□□□□ 0.58
EXT1-201ENST00000378204 SYAP1Q96A49 352 aaPredicted RBP18.71■□□□□ 0.58
EXT1-201ENST00000378204 APBB1O00213 710 aa18.7■□□□□ 0.58
EXT1-201ENST00000378204 ISY1Q9ULR0 285 aaKnown RBP18.7■□□□□ 0.58
EXT1-201ENST00000378204 TCERG1O14776 1098 aaKnown RBP18.7■□□□□ 0.58
EXT1-201ENST00000378204 CLSTN1O94985 981 aa18.7■□□□□ 0.58
EXT1-201ENST00000378204 GGT6Q6P531 493 aa18.68■□□□□ 0.58
EXT1-201ENST00000378204 ITPRIPQ8IWB1 547 aa18.68■□□□□ 0.58
EXT1-201ENST00000378204 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
EXT1-201ENST00000378204 EIF3AQ14152 1382 aaKnown RBP18.66■□□□□ 0.58
EXT1-201ENST00000378204 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
EXT1-201ENST00000378204 SPAG9O60271 1321 aaKnown RBP18.66■□□□□ 0.58
EXT1-201ENST00000378204 GPATCH3Q96I76 525 aa18.65■□□□□ 0.58
EXT1-201ENST00000378204 HDAC5Q9UQL6 1122 aa18.65■□□□□ 0.58
EXT1-201ENST00000378204 ZNF771Q7L3S4 317 aaPredicted RBP18.64■□□□□ 0.58
EXT1-201ENST00000378204 PAK3O75914 559 aaPredicted RBP18.64■□□□□ 0.57
EXT1-201ENST00000378204 CCDC34Q96HJ3 373 aa18.64■□□□□ 0.57
EXT1-201ENST00000378204 SOGA1O94964 1423 aa18.63■□□□□ 0.57
EXT1-201ENST00000378204 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
EXT1-201ENST00000378204 FOXD1Q16676 465 aa18.62■□□□□ 0.57
EXT1-201ENST00000378204 STK31Q9BXU1 1019 aa18.62■□□□□ 0.57
EXT1-201ENST00000378204 MPHOSPH9Q99550 1183 aa18.62■□□□□ 0.57
EXT1-201ENST00000378204 NUP155O75694 1391 aa18.62■□□□□ 0.57
EXT1-201ENST00000378204 SLKQ9H2G2 1235 aaPredicted RBP18.61■□□□□ 0.57
EXT1-201ENST00000378204 GZF1Q9H116 711 aaPredicted RBP18.61■□□□□ 0.57
EXT1-201ENST00000378204 TPM4P67936 248 aa18.61■□□□□ 0.57
EXT1-201ENST00000378204 HMMRO75330 724 aa18.61■□□□□ 0.57
EXT1-201ENST00000378204 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
EXT1-201ENST00000378204 RAB3GAP2Q9H2M9 1393 aa18.6■□□□□ 0.57
EXT1-201ENST00000378204 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
EXT1-201ENST00000378204 SMC4Q9NTJ3 1288 aa18.59■□□□□ 0.57
EXT1-201ENST00000378204 CSPP1Q1MSJ5 1256 aa18.59■□□□□ 0.57
EXT1-201ENST00000378204 GORABQ5T7V8 394 aa18.59■□□□□ 0.57
EXT1-201ENST00000378204 TERF2IPQ9NYB0 399 aa18.58■□□□□ 0.56
EXT1-201ENST00000378204 TRIM6-TRIM34B2RNG4 842 aa18.57■□□□□ 0.56
EXT1-201ENST00000378204 CSB-PGBD3P0DP91 1061 aa18.57■□□□□ 0.56
EXT1-201ENST00000378204 NCBP3Q53F19 620 aaKnown RBP18.56■□□□□ 0.56
EXT1-201ENST00000378204 NOC3LQ8WTT2 800 aaKnown RBP18.56■□□□□ 0.56
EXT1-201ENST00000378204 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
EXT1-201ENST00000378204 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
EXT1-201ENST00000378204 MAP7D2Q96T17 732 aa18.55■□□□□ 0.56
EXT1-201ENST00000378204 ZNF330Q9Y3S2 320 aaPredicted RBP18.55■□□□□ 0.56
EXT1-201ENST00000378204 MTERF4Q7Z6M4 381 aaKnown RBP18.55■□□□□ 0.56
EXT1-201ENST00000378204 TMX4Q9H1E5 349 aaPredicted RBP18.54■□□□□ 0.56
EXT1-201ENST00000378204 NOM1Q5C9Z4 860 aaKnown RBP18.54■□□□□ 0.56
EXT1-201ENST00000378204 TAF7LQ5H9L4 462 aa18.54■□□□□ 0.56
EXT1-201ENST00000378204 PHLDB1Q86UU1 1377 aa18.54■□□□□ 0.56
EXT1-201ENST00000378204 TSHZ2Q9NRE2 1034 aa18.54■□□□□ 0.56
EXT1-201ENST00000378204 MFAP1P55081 439 aaKnown RBP18.54■□□□□ 0.56
EXT1-201ENST00000378204 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
EXT1-201ENST00000378204 NLRP13Q86W25 1043 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms