RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 PDE3BQ13370 1112 aa21.03■□□□□ 0.96
ATXN2-201ENST00000377617 TPM4P67936 248 aa21.03■□□□□ 0.96
ATXN2-201ENST00000377617 ZNF771Q7L3S4 317 aaPredicted RBP21.03■□□□□ 0.96
ATXN2-201ENST00000377617 PDE4AP27815 886 aa21.02■□□□□ 0.96
ATXN2-201ENST00000377617 OS9Q13438 667 aaPredicted RBP21.02■□□□□ 0.96
ATXN2-201ENST00000377617 MTERF4Q7Z6M4 381 aaKnown RBP21.02■□□□□ 0.96
ATXN2-201ENST00000377617 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
ATXN2-201ENST00000377617 PDZRN4Q6ZMN7 1036 aaPredicted RBP21■□□□□ 0.95
ATXN2-201ENST00000377617 SCRIBQ14160 1630 aa21■□□□□ 0.95
ATXN2-201ENST00000377617 TMF1P82094 1093 aa21■□□□□ 0.95
ATXN2-201ENST00000377617 NAP1L2Q9ULW6 460 aaPredicted RBP21■□□□□ 0.95
ATXN2-201ENST00000377617 PRKCSHP14314 528 aaPredicted RBP20.99■□□□□ 0.95
ATXN2-201ENST00000377617 HSPA5P11021 654 aaKnown RBP20.98■□□□□ 0.95
ATXN2-201ENST00000377617 FAM13BQ9NYF5 915 aa20.98■□□□□ 0.95
ATXN2-201ENST00000377617 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
ATXN2-201ENST00000377617 RALBP1Q15311 655 aa20.97■□□□□ 0.95
ATXN2-201ENST00000377617 KIAA1211Q6ZU35 1233 aa20.97■□□□□ 0.95
ATXN2-201ENST00000377617 FAM43AQ8N2R8 423 aa20.97■□□□□ 0.95
ATXN2-201ENST00000377617 NOC3LQ8WTT2 800 aaKnown RBP20.97■□□□□ 0.95
ATXN2-201ENST00000377617 FAM161AQ3B820 660 aa20.96■□□□□ 0.95
ATXN2-201ENST00000377617 KTN1Q86UP2 1357 aaKnown RBP20.95■□□□□ 0.94
ATXN2-201ENST00000377617 DDX49Q9Y6V7 483 aaKnown RBP20.95■□□□□ 0.94
ATXN2-201ENST00000377617 GPS2Q13227 327 aa20.94■□□□□ 0.94
ATXN2-201ENST00000377617 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
ATXN2-201ENST00000377617 U2SURPO15042 1029 aaKnown RBP20.92■□□□□ 0.94
ATXN2-201ENST00000377617 CENPQQ7L2Z9 268 aaPredicted RBP20.9■□□□□ 0.94
ATXN2-201ENST00000377617 CCDC34Q96HJ3 373 aa20.9■□□□□ 0.94
ATXN2-201ENST00000377617 TEX35Q5T0J7 233 aa20.89■□□□□ 0.93
ATXN2-201ENST00000377617 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.93
ATXN2-201ENST00000377617 ST18O60284 1047 aa20.88■□□□□ 0.93
ATXN2-201ENST00000377617 TAOK2Q9UL54 1235 aa20.87■□□□□ 0.93
ATXN2-201ENST00000377617 SETD5Q9C0A6 1442 aa20.87■□□□□ 0.93
ATXN2-201ENST00000377617 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
ATXN2-201ENST00000377617 GNL2Q13823 731 aaKnown RBP20.85■□□□□ 0.93
ATXN2-201ENST00000377617 PODXL2Q9NZ53 605 aa20.85■□□□□ 0.93
ATXN2-201ENST00000377617 CALRP27797 417 aaKnown RBP20.85■□□□□ 0.93
ATXN2-201ENST00000377617 TPM2P07951 284 aa20.84■□□□□ 0.93
ATXN2-201ENST00000377617 A0A0U1RQG5 324 aaPredicted RBP20.84■□□□□ 0.93
ATXN2-201ENST00000377617 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
ATXN2-201ENST00000377617 CFDP1Q9UEE9 299 aaPredicted RBP20.83■□□□□ 0.92
ATXN2-201ENST00000377617 ITPRIPQ8IWB1 547 aa20.83■□□□□ 0.92
ATXN2-201ENST00000377617 TPM3P06753 285 aa20.82■□□□□ 0.92
ATXN2-201ENST00000377617 SLC4A3P48751 1232 aa20.82■□□□□ 0.92
ATXN2-201ENST00000377617 NPM1P06748 294 aaKnown RBP eCLIP20.82■□□□□ 0.92
ATXN2-201ENST00000377617 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
ATXN2-201ENST00000377617 CHMP5Q9NZZ3 219 aa20.81■□□□□ 0.92
ATXN2-201ENST00000377617 PLEKHD1A6NEE1 506 aa20.8■□□□□ 0.92
ATXN2-201ENST00000377617 MRE11P49959 708 aa20.8■□□□□ 0.92
ATXN2-201ENST00000377617 ATP6V1DQ9Y5K8 247 aa20.8■□□□□ 0.92
ATXN2-201ENST00000377617 TULP1O00294 542 aaPredicted RBP20.79■□□□□ 0.92
ATXN2-201ENST00000377617 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
ATXN2-201ENST00000377617 KIF16BQ96L93 1317 aa20.79■□□□□ 0.92
ATXN2-201ENST00000377617 NOM1Q5C9Z4 860 aaKnown RBP20.79■□□□□ 0.92
ATXN2-201ENST00000377617 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
ATXN2-201ENST00000377617 NLRP13Q86W25 1043 aa20.78■□□□□ 0.92
ATXN2-201ENST00000377617 CCDC66A2RUB6 948 aa20.78■□□□□ 0.92
ATXN2-201ENST00000377617 NACADO15069 1562 aa20.78■□□□□ 0.92
ATXN2-201ENST00000377617 NFKBIBQ15653 356 aa20.77■□□□□ 0.92
ATXN2-201ENST00000377617 DCAF11Q8TEB1 546 aa20.77■□□□□ 0.92
ATXN2-201ENST00000377617 ZBED9Q6R2W3 1325 aa20.77■□□□□ 0.92
ATXN2-201ENST00000377617 FOXD4L1Q9NU39 408 aa20.76■□□□□ 0.91
ATXN2-201ENST00000377617 GOLGA6L19H0YKK7 550 aa20.75■□□□□ 0.91
ATXN2-201ENST00000377617 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
ATXN2-201ENST00000377617 DIAPH3Q9NSV4 1193 aa20.75■□□□□ 0.91
ATXN2-201ENST00000377617 KIF3AQ9Y496 699 aa20.74■□□□□ 0.91
ATXN2-201ENST00000377617 APBB1O00213 710 aa20.73■□□□□ 0.91
ATXN2-201ENST00000377617 HMMRO75330 724 aa20.73■□□□□ 0.91
ATXN2-201ENST00000377617 CENPJQ9HC77 1338 aaPredicted RBP20.73■□□□□ 0.91
ATXN2-201ENST00000377617 APPP05067 770 aa20.72■□□□□ 0.91
ATXN2-201ENST00000377617 RRP1P56182 461 aaKnown RBP20.71■□□□□ 0.91
ATXN2-201ENST00000377617 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
ATXN2-201ENST00000377617 BECN2A8MW95 431 aa20.7■□□□□ 0.91
ATXN2-201ENST00000377617 ROCK2O75116 1388 aaKnown RBP20.7■□□□□ 0.9
ATXN2-201ENST00000377617 RRP9O43818 475 aaKnown RBP20.7■□□□□ 0.9
ATXN2-201ENST00000377617 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
ATXN2-201ENST00000377617 ARGLU1Q9NWB6 273 aaPredicted RBP20.69■□□□□ 0.9
ATXN2-201ENST00000377617 SMC4Q9NTJ3 1288 aa20.68■□□□□ 0.9
ATXN2-201ENST00000377617 CCDC70Q6NSX1 233 aa20.68■□□□□ 0.9
ATXN2-201ENST00000377617 POGKQ9P215 609 aa20.68■□□□□ 0.9
ATXN2-201ENST00000377617 CGNL1Q0VF96 1302 aa20.68■□□□□ 0.9
ATXN2-201ENST00000377617 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
ATXN2-201ENST00000377617 R3HCC1Q9Y3T6 440 aaKnown RBP20.68■□□□□ 0.9
ATXN2-201ENST00000377617 VPS8Q8N3P4 1428 aa20.66■□□□□ 0.9
ATXN2-201ENST00000377617 CCAR2Q8N163 923 aaKnown RBP20.66■□□□□ 0.9
ATXN2-201ENST00000377617 HMGN5P82970 282 aaKnown RBP20.66■□□□□ 0.9
ATXN2-201ENST00000377617 IL27Q8NEV9 243 aa20.66■□□□□ 0.9
ATXN2-201ENST00000377617 KIF27Q86VH2 1401 aa20.66■□□□□ 0.9
ATXN2-201ENST00000377617 ZNF592Q92610 1267 aa20.66■□□□□ 0.9
ATXN2-201ENST00000377617 CHMP4AQ9BY43 222 aa20.66■□□□□ 0.9
ATXN2-201ENST00000377617 CWC15Q9P013 229 aaKnown RBP20.66■□□□□ 0.9
ATXN2-201ENST00000377617 BRPF3Q9ULD4 1205 aa20.65■□□□□ 0.9
ATXN2-201ENST00000377617 RAB3GAP2Q9H2M9 1393 aa20.65■□□□□ 0.9
ATXN2-201ENST00000377617 U2AF1L5P0DN76 240 aaPredicted RBP20.63■□□□□ 0.89
ATXN2-201ENST00000377617 U2AF1Q01081 240 aaKnown RBP eCLIP20.63■□□□□ 0.89
ATXN2-201ENST00000377617 CLUAP1Q96AJ1 413 aa20.63■□□□□ 0.89
ATXN2-201ENST00000377617 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
ATXN2-201ENST00000377617 HDAC5Q9UQL6 1122 aa20.63■□□□□ 0.89
ATXN2-201ENST00000377617 CCDC39Q9UFE4 941 aa20.63■□□□□ 0.89
ATXN2-201ENST00000377617 TRIM6-TRIM34B2RNG4 842 aa20.62■□□□□ 0.89
ATXN2-201ENST00000377617 NUCB2P80303 420 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms