RNA–Protein interactions for RNA: ENST00000377464.5

RERE-202, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RERE, Length 6,733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-202ENST00000377464 CEP89Q96ST8 783 aa16.39■□□□□ 0.21
RERE-202ENST00000377464 GZF1Q9H116 711 aaPredicted RBP16.39■□□□□ 0.21
RERE-202ENST00000377464 HTATSF1O43719 755 aaKnown RBP16.38■□□□□ 0.21
RERE-202ENST00000377464 SAFB2Q14151 953 aaKnown RBP eCLIP16.38■□□□□ 0.214e-6■■■■□ 19.5
RERE-202ENST00000377464 MLECQ14165 292 aa16.38■□□□□ 0.21
RERE-202ENST00000377464 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
RERE-202ENST00000377464 CSB-PGBD3P0DP91 1061 aa16.37■□□□□ 0.21
RERE-202ENST00000377464 GORABQ5T7V8 394 aa16.37■□□□□ 0.21
RERE-202ENST00000377464 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
RERE-202ENST00000377464 CCDC9Q9Y3X0 531 aaKnown RBP16.37■□□□□ 0.21
RERE-202ENST00000377464 CFDP1Q9UEE9 299 aaPredicted RBP16.36■□□□□ 0.21
RERE-202ENST00000377464 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
RERE-202ENST00000377464 TRHP20396 242 aaPredicted RBP16.36■□□□□ 0.21
RERE-202ENST00000377464 RSF1Q96T23 1441 aaPredicted RBP16.36■□□□□ 0.21
RERE-202ENST00000377464 WWC1Q8IX03 1113 aa16.35■□□□□ 0.21
RERE-202ENST00000377464 GBP4Q96PP9 640 aa16.35■□□□□ 0.21
RERE-202ENST00000377464 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
RERE-202ENST00000377464 TAF7LQ5H9L4 462 aa16.34■□□□□ 0.21
RERE-202ENST00000377464 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
RERE-202ENST00000377464 PTMSP20962 102 aa16.32■□□□□ 0.2
RERE-202ENST00000377464 MARCH6O60337 910 aa16.32■□□□□ 0.2
RERE-202ENST00000377464 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
RERE-202ENST00000377464 TMF1P82094 1093 aa16.31■□□□□ 0.2
RERE-202ENST00000377464 SYAP1Q96A49 352 aaPredicted RBP16.31■□□□□ 0.2
RERE-202ENST00000377464 CCDC34Q96HJ3 373 aa16.3■□□□□ 0.2
RERE-202ENST00000377464 SCRIBQ14160 1630 aa16.29■□□□□ 0.2
RERE-202ENST00000377464 HDGFP51858 240 aaKnown RBP16.29■□□□□ 0.2
RERE-202ENST00000377464 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
RERE-202ENST00000377464 TPM3P06753 285 aa16.29■□□□□ 0.2
RERE-202ENST00000377464 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
RERE-202ENST00000377464 NOL8Q76FK4 1167 aaKnown RBP16.28■□□□□ 0.2
RERE-202ENST00000377464 PES1O00541 588 aaKnown RBP16.28■□□□□ 0.2
RERE-202ENST00000377464 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
RERE-202ENST00000377464 TRIM6-TRIM34B2RNG4 842 aa16.27■□□□□ 0.2
RERE-202ENST00000377464 STK26Q9P289 416 aa16.27■□□□□ 0.2
RERE-202ENST00000377464 TOMM22Q9NS69 142 aa16.27■□□□□ 0.2
RERE-202ENST00000377464 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.19
RERE-202ENST00000377464 CLIP1P30622 1438 aa16.26■□□□□ 0.19
RERE-202ENST00000377464 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
RERE-202ENST00000377464 IPO8O15397 1037 aaKnown RBP16.26■□□□□ 0.19
RERE-202ENST00000377464 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
RERE-202ENST00000377464 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
RERE-202ENST00000377464 FOXD4L1Q9NU39 408 aa16.24■□□□□ 0.19
RERE-202ENST00000377464 FRAT2O75474 233 aaPredicted RBP16.24■□□□□ 0.19
RERE-202ENST00000377464 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
RERE-202ENST00000377464 KANK1Q14678 1352 aa16.23■□□□□ 0.19
RERE-202ENST00000377464 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
RERE-202ENST00000377464 TPD52L1Q16890 204 aaPredicted RBP16.23■□□□□ 0.19
RERE-202ENST00000377464 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
RERE-202ENST00000377464 CSPP1Q1MSJ5 1256 aa16.22■□□□□ 0.19
RERE-202ENST00000377464 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.18
RERE-202ENST00000377464 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
RERE-202ENST00000377464 FOXD4L5Q5VV16 416 aaPredicted RBP16.19■□□□□ 0.18
RERE-202ENST00000377464 FOXD4L4Q8WXT5 416 aaPredicted RBP16.19■□□□□ 0.18
RERE-202ENST00000377464 CCAR2Q8N163 923 aaKnown RBP16.18■□□□□ 0.18
RERE-202ENST00000377464 GOLGA6L3A6NEY3 463 aa16.18■□□□□ 0.18
RERE-202ENST00000377464 RWDD1Q9H446 243 aaPredicted RBP16.18■□□□□ 0.18
RERE-202ENST00000377464 SF3A1Q15459 793 aaKnown RBP16.18■□□□□ 0.18
RERE-202ENST00000377464 STK31Q9BXU1 1019 aa16.17■□□□□ 0.18
RERE-202ENST00000377464 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
RERE-202ENST00000377464 TCEAL9Q9UHQ7 104 aa16.16■□□□□ 0.18
RERE-202ENST00000377464 SLC4A10Q6U841 1118 aa16.16■□□□□ 0.18
RERE-202ENST00000377464 TSR1Q2NL82 804 aaKnown RBP16.16■□□□□ 0.18
RERE-202ENST00000377464 GTF2E1P29083 439 aaPredicted RBP16.16■□□□□ 0.18
RERE-202ENST00000377464 RAD21O60216 631 aa16.15■□□□□ 0.18
RERE-202ENST00000377464 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
RERE-202ENST00000377464 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.18
RERE-202ENST00000377464 SPAG9O60271 1321 aaKnown RBP16.15■□□□□ 0.18
RERE-202ENST00000377464 CALRP27797 417 aaKnown RBP16.15■□□□□ 0.18
RERE-202ENST00000377464 TPM2P07951 284 aa16.14■□□□□ 0.17
RERE-202ENST00000377464 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
RERE-202ENST00000377464 CTDP1Q9Y5B0 961 aaPredicted RBP16.12■□□□□ 0.17
RERE-202ENST00000377464 H3BQV1 296 aa16.12■□□□□ 0.17
RERE-202ENST00000377464 IFFO2Q5TF58 517 aa16.12■□□□□ 0.17
RERE-202ENST00000377464 PHF14O94880 888 aa16.11■□□□□ 0.17
RERE-202ENST00000377464 PCMTD1Q96MG8 357 aaPredicted RBP16.1■□□□□ 0.17
RERE-202ENST00000377464 MSH5O43196 834 aa16.09■□□□□ 0.17
RERE-202ENST00000377464 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
RERE-202ENST00000377464 KTN1Q86UP2 1357 aaKnown RBP16.09■□□□□ 0.17
RERE-202ENST00000377464 HMMRO75330 724 aa16.09■□□□□ 0.17
RERE-202ENST00000377464 CCDC70Q6NSX1 233 aa16.09■□□□□ 0.17
RERE-202ENST00000377464 TRIM34Q9BYJ4 488 aa16.09■□□□□ 0.17
RERE-202ENST00000377464 GGT6Q6P531 493 aa16.08■□□□□ 0.17
RERE-202ENST00000377464 SMC4Q9NTJ3 1288 aa16.08■□□□□ 0.17
RERE-202ENST00000377464 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.17
RERE-202ENST00000377464 TCERG1O14776 1098 aaKnown RBP16.07■□□□□ 0.16
RERE-202ENST00000377464 TPM1P09493 284 aa16.07■□□□□ 0.16
RERE-202ENST00000377464 RRP12Q5JTH9 1297 aaKnown RBP16.06■□□□□ 0.16
RERE-202ENST00000377464 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
RERE-202ENST00000377464 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
RERE-202ENST00000377464 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
RERE-202ENST00000377464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.05■□□□□ 0.162e-6■■■■■ 119
RERE-202ENST00000377464 KIF3AQ9Y496 699 aa16.05■□□□□ 0.16
RERE-202ENST00000377464 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
RERE-202ENST00000377464 RCAN3Q9UKA8 241 aa16.05■□□□□ 0.16
RERE-202ENST00000377464 RBM19Q9Y4C8 960 aaKnown RBP16.05■□□□□ 0.16
RERE-202ENST00000377464 CWC22Q9HCG8 908 aaKnown RBP16.05■□□□□ 0.16
RERE-202ENST00000377464 GOLGA6L19H0YKK7 550 aa16.05■□□□□ 0.16
RERE-202ENST00000377464 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
RERE-202ENST00000377464 FOXD4L6Q3SYB3 417 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms