RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 TOP2AP11388 1531 aaKnown RBP10.11□□□□□ -0.79
SSX3-202ENST00000376893 NLRP6P59044 892 aa10.1□□□□□ -0.79
SSX3-202ENST00000376893 IL27Q8NEV9 243 aa10.1□□□□□ -0.79
SSX3-202ENST00000376893 FBXO22Q8NEZ5 403 aa10.09□□□□□ -0.79
SSX3-202ENST00000376893 NESP48681 1621 aa10.08□□□□□ -0.8
SSX3-202ENST00000376893 PDE4AP27815 886 aa10.08□□□□□ -0.8
SSX3-202ENST00000376893 SOX12O15370 315 aa10.07□□□□□ -0.8
SSX3-202ENST00000376893 PPP1R37O75864 691 aa10.07□□□□□ -0.8
SSX3-202ENST00000376893 FLIIQ13045 1269 aa10.07□□□□□ -0.8
SSX3-202ENST00000376893 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
SSX3-202ENST00000376893 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
SSX3-202ENST00000376893 TRIM66O15016 1216 aa10.06□□□□□ -0.8
SSX3-202ENST00000376893 PSEN1P49768 467 aa10.06□□□□□ -0.8
SSX3-202ENST00000376893 ZNF579Q8NAF0 562 aaKnown RBP10.06□□□□□ -0.8
SSX3-202ENST00000376893 C1orf115Q9H7X2 142 aa10.06□□□□□ -0.8
SSX3-202ENST00000376893 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
SSX3-202ENST00000376893 PITPNM1O00562 1244 aa10.05□□□□□ -0.8
SSX3-202ENST00000376893 PDE4DQ08499 809 aa10.05□□□□□ -0.8
SSX3-202ENST00000376893 KRI1Q8N9T8 703 aaKnown RBP10.05□□□□□ -0.8
SSX3-202ENST00000376893 CCDC9Q9Y3X0 531 aaKnown RBP10.04□□□□□ -0.8
SSX3-202ENST00000376893 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
SSX3-202ENST00000376893 MKRN3Q13064 507 aaKnown RBP10.02□□□□□ -0.81
SSX3-202ENST00000376893 CRISPLD2Q9H0B8 497 aa10.02□□□□□ -0.81
SSX3-202ENST00000376893 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
SSX3-202ENST00000376893 LARP6Q9BRS8 491 aaKnown RBP10.01□□□□□ -0.81
SSX3-202ENST00000376893 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
SSX3-202ENST00000376893 LAMC3Q9Y6N6 1575 aa10□□□□□ -0.81
SSX3-202ENST00000376893 ERCC6Q03468 1493 aa9.99□□□□□ -0.81
SSX3-202ENST00000376893 DDRGK1Q96HY6 314 aa9.99□□□□□ -0.81
SSX3-202ENST00000376893 ARID3AQ99856 593 aa9.99□□□□□ -0.81
SSX3-202ENST00000376893 PCDHB8Q9UN66 801 aa9.99□□□□□ -0.81
SSX3-202ENST00000376893 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
SSX3-202ENST00000376893 KIF21AQ7Z4S6 1674 aa9.98□□□□□ -0.81
SSX3-202ENST00000376893 APBB1O00213 710 aa9.97□□□□□ -0.81
SSX3-202ENST00000376893 RBM26Q5T8P6 1007 aaKnown RBP9.97□□□□□ -0.81
SSX3-202ENST00000376893 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
SSX3-202ENST00000376893 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
SSX3-202ENST00000376893 A6NJR5 290 aa9.96□□□□□ -0.82
SSX3-202ENST00000376893 EFCAB3Q8N7B9 438 aa9.95□□□□□ -0.82
SSX3-202ENST00000376893 CCDC88BA6NC98 1476 aa9.94□□□□□ -0.82
SSX3-202ENST00000376893 PHF8Q9UPP1 1060 aa9.94□□□□□ -0.82
SSX3-202ENST00000376893 ZNF316A6NFI3 1004 aaPredicted RBP9.93□□□□□ -0.82
SSX3-202ENST00000376893 CADPSQ9ULU8 1353 aa9.92□□□□□ -0.82
SSX3-202ENST00000376893 MLLT3P42568 568 aaPredicted RBP9.92□□□□□ -0.82
SSX3-202ENST00000376893 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
SSX3-202ENST00000376893 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
SSX3-202ENST00000376893 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
SSX3-202ENST00000376893 HAX1O00165 279 aa9.91□□□□□ -0.82
SSX3-202ENST00000376893 ONECUT3O60422 494 aaPredicted RBP9.91□□□□□ -0.82
SSX3-202ENST00000376893 TSPYL2Q9H2G4 693 aaPredicted RBP9.91□□□□□ -0.82
SSX3-202ENST00000376893 CCDC61Q9Y6R9 512 aa9.91□□□□□ -0.82
SSX3-202ENST00000376893 CFTRP13569 1480 aa9.91□□□□□ -0.82
SSX3-202ENST00000376893 PLEKHG3A1L390 1219 aa9.9□□□□□ -0.82
SSX3-202ENST00000376893 CHADLQ6NUI6 762 aa9.9□□□□□ -0.82
SSX3-202ENST00000376893 ARID3CA6NKF2 412 aa9.89□□□□□ -0.83
SSX3-202ENST00000376893 AMHR2Q16671 573 aa9.89□□□□□ -0.83
SSX3-202ENST00000376893 PRDM2Q13029 1718 aa9.89□□□□□ -0.83
SSX3-202ENST00000376893 FANCD2Q9BXW9 1451 aa9.88□□□□□ -0.83
SSX3-202ENST00000376893 CABP2Q9NPB3 220 aa9.88□□□□□ -0.83
SSX3-202ENST00000376893 FARP1Q9Y4F1 1045 aaPredicted RBP9.88□□□□□ -0.83
SSX3-202ENST00000376893 PDS5BQ9NTI5 1447 aa9.88□□□□□ -0.83
SSX3-202ENST00000376893 CEP164Q9UPV0 1460 aa9.87□□□□□ -0.83
SSX3-202ENST00000376893 GPR37O15354 613 aa9.87□□□□□ -0.83
SSX3-202ENST00000376893 MRC2Q9UBG0 1479 aa9.86□□□□□ -0.83
SSX3-202ENST00000376893 TRAK2O60296 914 aa9.86□□□□□ -0.83
SSX3-202ENST00000376893 CUX2O14529 1486 aa9.85□□□□□ -0.83
SSX3-202ENST00000376893 PDIA6Q15084 440 aa9.85□□□□□ -0.83
SSX3-202ENST00000376893 TRAIPQ9BWF2 469 aa9.85□□□□□ -0.83
SSX3-202ENST00000376893 WDR62O43379 1518 aa9.85□□□□□ -0.83
SSX3-202ENST00000376893 MAP2K5Q13163 448 aa9.84□□□□□ -0.83
SSX3-202ENST00000376893 CCDC82Q8N4S0 544 aa9.84□□□□□ -0.83
SSX3-202ENST00000376893 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
SSX3-202ENST00000376893 KCTD17Q8N5Z5 321 aa9.83□□□□□ -0.84
SSX3-202ENST00000376893 MS4A4AQ96JQ5 239 aa9.83□□□□□ -0.84
SSX3-202ENST00000376893 IFNL1Q8IU54 200 aa9.82□□□□□ -0.84
SSX3-202ENST00000376893 URB2Q14146 1524 aaKnown RBP9.81□□□□□ -0.84
SSX3-202ENST00000376893 PPP1R15BQ5SWA1 713 aa9.8□□□□□ -0.84
SSX3-202ENST00000376893 PARP9Q8IXQ6 854 aa9.8□□□□□ -0.84
SSX3-202ENST00000376893 IRF6O14896 467 aa9.79□□□□□ -0.84
SSX3-202ENST00000376893 CCDC102AQ96A19 550 aa9.79□□□□□ -0.84
SSX3-202ENST00000376893 POTEMA6NI47 508 aa9.78□□□□□ -0.84
SSX3-202ENST00000376893 PRKAR2AP13861 404 aaKnown RBP9.78□□□□□ -0.84
SSX3-202ENST00000376893 GPHNQ9NQX3 736 aaPredicted RBP9.78□□□□□ -0.84
SSX3-202ENST00000376893 FXR2P51116 673 aaKnown RBP eCLIP9.76□□□□□ -0.85
SSX3-202ENST00000376893 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
SSX3-202ENST00000376893 SERPINA10Q9UK55 444 aa9.75□□□□□ -0.85
SSX3-202ENST00000376893 DPYSL4O14531 572 aa9.74□□□□□ -0.85
SSX3-202ENST00000376893 MCM6Q14566 821 aa9.74□□□□□ -0.85
SSX3-202ENST00000376893 CLUAP1Q96AJ1 413 aa9.74□□□□□ -0.85
SSX3-202ENST00000376893 DNMBPQ6XZF7 1577 aa9.74□□□□□ -0.85
SSX3-202ENST00000376893 TOPBP1Q92547 1522 aa9.73□□□□□ -0.85
SSX3-202ENST00000376893 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
SSX3-202ENST00000376893 GNPATO15228 680 aa9.72□□□□□ -0.85
SSX3-202ENST00000376893 EMILIN3Q9NT22 766 aa9.72□□□□□ -0.85
SSX3-202ENST00000376893 MAP3K13O43283 966 aa9.71□□□□□ -0.86
SSX3-202ENST00000376893 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
SSX3-202ENST00000376893 HIC1Q14526 733 aa9.71□□□□□ -0.86
SSX3-202ENST00000376893 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
SSX3-202ENST00000376893 CUX1P39880 1505 aa9.7□□□□□ -0.86
SSX3-202ENST00000376893 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms