RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
HLA-A-202ENST00000376806 CROCC2H7BZ55 1655 aa24.66■■□□□ 1.54
HLA-A-202ENST00000376806 ADGBQ8N7X0 1667 aa24.63■■□□□ 1.53
HLA-A-202ENST00000376806 PLEKHD1A6NEE1 506 aa24.63■■□□□ 1.53
HLA-A-202ENST00000376806 ABCC5O15440 1437 aa24.61■■□□□ 1.53
HLA-A-202ENST00000376806 KDM6BO15054 1643 aa24.61■■□□□ 1.53
HLA-A-202ENST00000376806 ZNF316A6NFI3 1004 aaPredicted RBP24.6■■□□□ 1.53
HLA-A-202ENST00000376806 CHIC2Q9UKJ5 165 aa24.58■■□□□ 1.53
HLA-A-202ENST00000376806 ROCK1Q13464 1354 aa24.58■■□□□ 1.53
HLA-A-202ENST00000376806 ZNF644Q9H582 1327 aaPredicted RBP24.58■■□□□ 1.52
HLA-A-202ENST00000376806 CFDP1Q9UEE9 299 aaPredicted RBP24.57■■□□□ 1.52
HLA-A-202ENST00000376806 PREX2Q70Z35 1606 aa24.56■■□□□ 1.52
HLA-A-202ENST00000376806 RRP7BPQ9NSQ0 103 aa24.56■■□□□ 1.52
HLA-A-202ENST00000376806 ZCCHC11Q5TAX3 1644 aaKnown RBP24.55■■□□□ 1.52
HLA-A-202ENST00000376806 UHRF1BP1LA0JNW5 1464 aa24.54■■□□□ 1.52
HLA-A-202ENST00000376806 CDC42BPBQ9Y5S2 1711 aa24.53■■□□□ 1.52
HLA-A-202ENST00000376806 TTC37Q6PGP7 1564 aa24.5■■□□□ 1.51
HLA-A-202ENST00000376806 ADGRL2O95490 1459 aa24.49■■□□□ 1.51
HLA-A-202ENST00000376806 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
HLA-A-202ENST00000376806 DIEXFQ68CQ4 756 aaKnown RBP24.47■■□□□ 1.51
HLA-A-202ENST00000376806 SHANK2Q9UPX8 1470 aa24.46■■□□□ 1.51
HLA-A-202ENST00000376806 KDM5BQ9UGL1 1544 aa24.46■■□□□ 1.51
HLA-A-202ENST00000376806 ZNF777Q9ULD5 760 aaPredicted RBP24.45■■□□□ 1.51
HLA-A-202ENST00000376806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.5
HLA-A-202ENST00000376806 ARHGEF5Q12774 1597 aa24.45■■□□□ 1.5
HLA-A-202ENST00000376806 SAMD9LQ8IVG5 1584 aa24.45■■□□□ 1.5
HLA-A-202ENST00000376806 SIN3AQ96ST3 1273 aa24.45■■□□□ 1.5
HLA-A-202ENST00000376806 DENND4BO75064 1496 aaPredicted RBP24.42■■□□□ 1.5
HLA-A-202ENST00000376806 NCOA1Q15788 1441 aa24.4■■□□□ 1.5
HLA-A-202ENST00000376806 NEUROD1Q13562 356 aa24.39■■□□□ 1.5
HLA-A-202ENST00000376806 TIMELESSQ9UNS1 1208 aa24.39■■□□□ 1.5
HLA-A-202ENST00000376806 ACIN1Q9UKV3 1341 aaKnown RBP24.39■■□□□ 1.49
HLA-A-202ENST00000376806 NPM1P06748 294 aaKnown RBP eCLIP24.37■■□□□ 1.49
HLA-A-202ENST00000376806 ARHGAP5Q13017 1502 aa24.36■■□□□ 1.49
HLA-A-202ENST00000376806 C9orf84Q5VXU9 1444 aa24.36■■□□□ 1.49
HLA-A-202ENST00000376806 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
HLA-A-202ENST00000376806 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
HLA-A-202ENST00000376806 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
HLA-A-202ENST00000376806 CCDC141Q6ZP82 1450 aa24.32■■□□□ 1.48
HLA-A-202ENST00000376806 SYCP2Q9BX26 1530 aa24.32■■□□□ 1.48
HLA-A-202ENST00000376806 ASXL2Q76L83 1435 aa24.3■■□□□ 1.48
HLA-A-202ENST00000376806 TONSLQ96HA7 1378 aa24.29■■□□□ 1.48
HLA-A-202ENST00000376806 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
HLA-A-202ENST00000376806 MPHOSPH9Q99550 1183 aa24.28■■□□□ 1.48
HLA-A-202ENST00000376806 KCNH8Q96L42 1107 aa24.27■■□□□ 1.48
HLA-A-202ENST00000376806 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
HLA-A-202ENST00000376806 PZPP20742 1482 aa24.25■■□□□ 1.47
HLA-A-202ENST00000376806 ANKRD50Q9ULJ7 1429 aa24.25■■□□□ 1.47
HLA-A-202ENST00000376806 WDR7Q9Y4E6 1490 aa24.24■■□□□ 1.47
HLA-A-202ENST00000376806 HNRNPMP52272 730 aaKnown RBP eCLIP24.24■■□□□ 1.47
HLA-A-202ENST00000376806 PLCH2O75038 1416 aa24.23■■□□□ 1.47
HLA-A-202ENST00000376806 PPP1R15AO75807 674 aaPredicted RBP24.21■■□□□ 1.47
HLA-A-202ENST00000376806 TSPY4P0CV99 314 aa24.21■■□□□ 1.47
HLA-A-202ENST00000376806 TSPY10P0CW01 314 aa24.21■■□□□ 1.47
HLA-A-202ENST00000376806 ARAP3Q8WWN8 1544 aa24.21■■□□□ 1.47
HLA-A-202ENST00000376806 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
HLA-A-202ENST00000376806 ABCC1P33527 1531 aa24.2■■□□□ 1.46
HLA-A-202ENST00000376806 PLXNC1O60486 1568 aa24.2■■□□□ 1.46
HLA-A-202ENST00000376806 KIF15Q9NS87 1388 aa24.19■■□□□ 1.46
HLA-A-202ENST00000376806 KDM5DQ9BY66 1539 aa24.19■■□□□ 1.46
HLA-A-202ENST00000376806 RSPH4AQ5TD94 716 aa24.19■■□□□ 1.46
HLA-A-202ENST00000376806 ABCA9Q8IUA7 1624 aa24.18■■□□□ 1.46
HLA-A-202ENST00000376806 ANKRD30BQ9BXX2 1392 aa24.16■■□□□ 1.46
HLA-A-202ENST00000376806 ARHGEF12Q9NZN5 1544 aa24.16■■□□□ 1.46
HLA-A-202ENST00000376806 SLC4A1APQ9BWU0 796 aaKnown RBP24.15■■□□□ 1.46
HLA-A-202ENST00000376806 RPRD2Q5VT52 1461 aaKnown RBP24.13■■□□□ 1.45
HLA-A-202ENST00000376806 FOXD1Q16676 465 aa24.13■■□□□ 1.45
HLA-A-202ENST00000376806 UNC13BO14795 1591 aa24.1■■□□□ 1.45
HLA-A-202ENST00000376806 EFCAB2Q5VUJ9 269 aa24.09■■□□□ 1.45
HLA-A-202ENST00000376806 TEX14Q8IWB6 1497 aa24.07■■□□□ 1.44
HLA-A-202ENST00000376806 FAM69CQ0P6D2 419 aa24.07■■□□□ 1.44
HLA-A-202ENST00000376806 DIP2BQ9P265 1576 aa24.04■■□□□ 1.44
HLA-A-202ENST00000376806 DUOX2Q9NRD8 1548 aa24.04■■□□□ 1.44
HLA-A-202ENST00000376806 NUP155O75694 1391 aa24.04■■□□□ 1.44
HLA-A-202ENST00000376806 MIER1Q8N108 512 aa24.02■■□□□ 1.44
HLA-A-202ENST00000376806 TRAPPC8Q9Y2L5 1435 aa24.02■■□□□ 1.44
HLA-A-202ENST00000376806 FAM135AQ9P2D6 1515 aa24.01■■□□□ 1.43
HLA-A-202ENST00000376806 FANCAO15360 1455 aa24.01■■□□□ 1.43
HLA-A-202ENST00000376806 ZFYVE16Q7Z3T8 1539 aa24■■□□□ 1.43
HLA-A-202ENST00000376806 PKD2Q13563 968 aa24■■□□□ 1.43
HLA-A-202ENST00000376806 IQGAP3Q86VI3 1631 aa23.99■■□□□ 1.43
HLA-A-202ENST00000376806 GLI2P10070 1586 aa23.98■■□□□ 1.43
HLA-A-202ENST00000376806 CD109Q6YHK3 1445 aa23.98■■□□□ 1.43
HLA-A-202ENST00000376806 ERBINQ96RT1 1412 aa23.98■■□□□ 1.43
HLA-A-202ENST00000376806 KIF13AQ9H1H9 1805 aa23.98■■□□□ 1.43
HLA-A-202ENST00000376806 INO80Q9ULG1 1556 aaPredicted RBP23.97■■□□□ 1.43
HLA-A-202ENST00000376806 L3MBTL2Q969R5 705 aa23.96■■□□□ 1.43
HLA-A-202ENST00000376806 MAGI2Q86UL8 1455 aa23.96■■□□□ 1.43
HLA-A-202ENST00000376806 TRHP20396 242 aaPredicted RBP23.94■■□□□ 1.42
HLA-A-202ENST00000376806 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
HLA-A-202ENST00000376806 CFAP74Q9C0B2 1584 aa23.94■■□□□ 1.42
HLA-A-202ENST00000376806 MAP3K4Q9Y6R4 1608 aa23.93■■□□□ 1.42
HLA-A-202ENST00000376806 ADGRL1O94910 1474 aa23.92■■□□□ 1.42
HLA-A-202ENST00000376806 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
HLA-A-202ENST00000376806 SPAG9O60271 1321 aaKnown RBP23.88■■□□□ 1.41
HLA-A-202ENST00000376806 TSPOAP1O95153 1857 aa23.87■■□□□ 1.41
HLA-A-202ENST00000376806 DEPDC5O75140 1603 aa23.86■■□□□ 1.41
HLA-A-202ENST00000376806 SCAPERQ9BY12 1400 aa23.86■■□□□ 1.41
HLA-A-202ENST00000376806 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
HLA-A-202ENST00000376806 PPRC1Q5VV67 1664 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms