RNA–Protein interactions for RNA: ENST00000376042.5

CCNB3-204, Transcript of cyclin B3, human

APPRIS P1 TSL 2 BASIC

Gene CCNB3, Length 4,693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNB3-204	ENST00000376042	MIA2	Q96PC5	1412 aa		10.69	□□□□□ -0.7
CCNB3-204	ENST00000376042	SCAPER	Q9BY12	1400 aa		10.68	□□□□□ -0.7
CCNB3-204	ENST00000376042	ASXL2	Q76L83	1435 aa		10.68	□□□□□ -0.7
CCNB3-204	ENST00000376042	PKD2	Q13563	968 aa		10.67	□□□□□ -0.7
CCNB3-204	ENST00000376042	AFAP1	Q8N556	730 aa		10.66	□□□□□ -0.7
CCNB3-204	ENST00000376042	CEP170	Q5SW79	1584 aa		10.66	□□□□□ -0.7
CCNB3-204	ENST00000376042	FGD6	Q6ZV73	1430 aa		10.66	□□□□□ -0.7
CCNB3-204	ENST00000376042	ABCC2	Q92887	1545 aa		10.66	□□□□□ -0.7
CCNB3-204	ENST00000376042	CDCA8	Q53HL2	280 aa		10.65	□□□□□ -0.7
CCNB3-204	ENST00000376042	NEFM	P07197	916 aa		10.64	□□□□□ -0.71
CCNB3-204	ENST00000376042	WDR7	Q9Y4E6	1490 aa		10.64	□□□□□ -0.71
CCNB3-204	ENST00000376042	POGK	Q9P215	609 aa		10.64	□□□□□ -0.71
CCNB3-204	ENST00000376042	CLSPN	Q9HAW4	1339 aa		10.64	□□□□□ -0.71
CCNB3-204	ENST00000376042	DENND4B	O75064	1496 aa	Predicted RBP	10.64	□□□□□ -0.71
CCNB3-204	ENST00000376042	KIAA0556	O60303	1618 aa		10.64	□□□□□ -0.71
CCNB3-204	ENST00000376042	KIF15	Q9NS87	1388 aa		10.63	□□□□□ -0.71
CCNB3-204	ENST00000376042	HRC	P23327	699 aa		10.63	□□□□□ -0.71
CCNB3-204	ENST00000376042	RAPGEF3	O95398	923 aa		10.63	□□□□□ -0.71
CCNB3-204	ENST00000376042	KIF14	Q15058	1648 aa		10.62	□□□□□ -0.71
CCNB3-204	ENST00000376042	PPP6R1	Q9UPN7	881 aa		10.62	□□□□□ -0.71
CCNB3-204	ENST00000376042	AKNA	Q7Z591	1439 aa		10.62	□□□□□ -0.71
CCNB3-204	ENST00000376042	TIMELESS	Q9UNS1	1208 aa		10.62	□□□□□ -0.71
CCNB3-204	ENST00000376042	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
CCNB3-204	ENST00000376042	ADGRL1	O94910	1474 aa		10.61	□□□□□ -0.71
CCNB3-204	ENST00000376042	MPHOSPH9	Q99550	1183 aa		10.61	□□□□□ -0.71
CCNB3-204	ENST00000376042	ATP10B	O94823	1461 aa		10.61	□□□□□ -0.71
CCNB3-204	ENST00000376042	CDK13	Q14004	1512 aa	Known RBP	10.61	□□□□□ -0.71
CCNB3-204	ENST00000376042	RAPGEF6	Q8TEU7	1601 aa		10.6	□□□□□ -0.71
CCNB3-204	ENST00000376042	ARHGEF11	O15085	1522 aa		10.6	□□□□□ -0.71
CCNB3-204	ENST00000376042	ZNF644	Q9H582	1327 aa	Predicted RBP	10.6	□□□□□ -0.71
CCNB3-204	ENST00000376042	MAP3K1	Q13233	1512 aa		10.6	□□□□□ -0.71
CCNB3-204	ENST00000376042	CTTNBP2	Q8WZ74	1663 aa		10.59	□□□□□ -0.71
CCNB3-204	ENST00000376042	FANCA	O15360	1455 aa		10.59	□□□□□ -0.71
CCNB3-204	ENST00000376042	HAP1	P54257	671 aa	Predicted RBP	10.58	□□□□□ -0.72
CCNB3-204	ENST00000376042	TIAM1	Q13009	1591 aa		10.58	□□□□□ -0.72
CCNB3-204	ENST00000376042	VGF	O15240	615 aa	Predicted RBP	10.57	□□□□□ -0.72
CCNB3-204	ENST00000376042	STAC3	Q96MF2	364 aa		10.57	□□□□□ -0.72
CCNB3-204	ENST00000376042	UHRF1BP1L	A0JNW5	1464 aa		10.57	□□□□□ -0.72
CCNB3-204	ENST00000376042	PLCH2	O75038	1416 aa		10.57	□□□□□ -0.72
CCNB3-204	ENST00000376042	CNGB1	Q14028	1251 aa	Predicted RBP	10.57	□□□□□ -0.72
CCNB3-204	ENST00000376042	ANKRD50	Q9ULJ7	1429 aa		10.57	□□□□□ -0.72
CCNB3-204	ENST00000376042	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
CCNB3-204	ENST00000376042	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.56	□□□□□ -0.72
CCNB3-204	ENST00000376042	DISP1	Q96F81	1524 aa		10.56	□□□□□ -0.72
CCNB3-204	ENST00000376042	C9orf84	Q5VXU9	1444 aa		10.56	□□□□□ -0.72
CCNB3-204	ENST00000376042	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.56	□□□□□ -0.72
CCNB3-204	ENST00000376042	DCAF11	Q8TEB1	546 aa		10.56	□□□□□ -0.72
CCNB3-204	ENST00000376042	CCDC141	Q6ZP82	1450 aa		10.55	□□□□□ -0.72
CCNB3-204	ENST00000376042	SCAF1	Q9H7N4	1312 aa	Known RBP	10.55	□□□□□ -0.72
CCNB3-204	ENST00000376042	PCF11	O94913	1555 aa	Known RBP	10.55	□□□□□ -0.72
CCNB3-204	ENST00000376042	CARD11	Q9BXL7	1154 aa		10.55	□□□□□ -0.72
CCNB3-204	ENST00000376042	NUP153	P49790	1475 aa	Known RBP	10.55	□□□□□ -0.72
CCNB3-204	ENST00000376042	RAB3GAP2	Q9H2M9	1393 aa		10.54	□□□□□ -0.72
CCNB3-204	ENST00000376042	CHD1	O14646	1710 aa		10.54	□□□□□ -0.72
CCNB3-204	ENST00000376042	SENP3	Q9H4L4	574 aa	Predicted RBP	10.54	□□□□□ -0.72
CCNB3-204	ENST00000376042	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.54	□□□□□ -0.72
CCNB3-204	ENST00000376042	ANP32C	O43423	234 aa		10.54	□□□□□ -0.72
CCNB3-204	ENST00000376042	CCDC144A	A2RUR9	1427 aa		10.53	□□□□□ -0.72
CCNB3-204	ENST00000376042	PELP1	Q8IZL8	1130 aa	Known RBP	10.53	□□□□□ -0.72
CCNB3-204	ENST00000376042	SLC52A1	Q9NWF4	448 aa		10.53	□□□□□ -0.72
CCNB3-204	ENST00000376042	CENPB	P07199	599 aa	Predicted RBP	10.51	□□□□□ -0.73
CCNB3-204	ENST00000376042	KIAA1107	Q9UPP5	1409 aa		10.5	□□□□□ -0.73
CCNB3-204	ENST00000376042	TMC1	Q8TDI8	760 aa		10.5	□□□□□ -0.73
CCNB3-204	ENST00000376042	DMRT2	Q9Y5R5	561 aa		10.5	□□□□□ -0.73
CCNB3-204	ENST00000376042	ZNF518A	Q6AHZ1	1483 aa		10.49	□□□□□ -0.73
CCNB3-204	ENST00000376042	EIF3A	Q14152	1382 aa	Known RBP	10.48	□□□□□ -0.73
CCNB3-204	ENST00000376042	ROCK1	Q13464	1354 aa		10.48	□□□□□ -0.73
CCNB3-204	ENST00000376042	ANKLE2	Q86XL3	938 aa		10.48	□□□□□ -0.73
CCNB3-204	ENST00000376042	DAPK1	P53355	1430 aa		10.48	□□□□□ -0.73
CCNB3-204	ENST00000376042	NEO1	Q92859	1461 aa		10.48	□□□□□ -0.73
CCNB3-204	ENST00000376042	ZNF316	A6NFI3	1004 aa	Predicted RBP	10.48	□□□□□ -0.73
CCNB3-204	ENST00000376042	ABCC10	Q5T3U5	1492 aa		10.47	□□□□□ -0.73
CCNB3-204	ENST00000376042	CAMSAP2	Q08AD1	1489 aa		10.47	□□□□□ -0.73
CCNB3-204	ENST00000376042	KDM5B	Q9UGL1	1544 aa		10.47	□□□□□ -0.73
CCNB3-204	ENST00000376042	RRBP1	Q9P2E9	1410 aa	Known RBP	10.47	□□□□□ -0.73
CCNB3-204	ENST00000376042	TMF1	P82094	1093 aa		10.46	□□□□□ -0.73
CCNB3-204	ENST00000376042	STK26	Q9P289	416 aa		10.46	□□□□□ -0.73
CCNB3-204	ENST00000376042	DHX29	Q7Z478	1369 aa	Known RBP	10.46	□□□□□ -0.74
CCNB3-204	ENST00000376042	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.46	□□□□□ -0.74
CCNB3-204	ENST00000376042	LMOD2	Q6P5Q4	547 aa		10.45	□□□□□ -0.74
CCNB3-204	ENST00000376042	SRPK2	P78362	688 aa	Known RBP	10.45	□□□□□ -0.74
CCNB3-204	ENST00000376042	TXNDC2	Q86VQ3	553 aa		10.45	□□□□□ -0.74
CCNB3-204	ENST00000376042	SIN3A	Q96ST3	1273 aa		10.45	□□□□□ -0.74
CCNB3-204	ENST00000376042	HFM1	A2PYH4	1435 aa		10.44	□□□□□ -0.74
CCNB3-204	ENST00000376042	FOXD1	Q16676	465 aa		10.44	□□□□□ -0.74
CCNB3-204	ENST00000376042	CLASP1	Q7Z460	1538 aa		10.44	□□□□□ -0.74
CCNB3-204	ENST00000376042	SAMD9	Q5K651	1589 aa		10.44	□□□□□ -0.74
CCNB3-204	ENST00000376042	NEFL	P07196	543 aa		10.43	□□□□□ -0.74
CCNB3-204	ENST00000376042	RPGRIP1L	Q68CZ1	1315 aa		10.42	□□□□□ -0.74
CCNB3-204	ENST00000376042	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.42	□□□□□ -0.74
CCNB3-204	ENST00000376042	KNSTRN	Q9Y448	316 aa		10.42	□□□□□ -0.74
CCNB3-204	ENST00000376042	ABCA8	O94911	1581 aa		10.41	□□□□□ -0.74
CCNB3-204	ENST00000376042	CNTLN	Q9NXG0	1405 aa		10.41	□□□□□ -0.74
CCNB3-204	ENST00000376042	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.41	□□□□□ -0.74
CCNB3-204	ENST00000376042	ZBTB7C	A1YPR0	619 aa		10.4	□□□□□ -0.74
CCNB3-204	ENST00000376042	CFAP53	Q96M91	514 aa		10.4	□□□□□ -0.74
CCNB3-204	ENST00000376042	ROCK2	O75116	1388 aa	Known RBP	10.4	□□□□□ -0.74
CCNB3-204	ENST00000376042	ITSN2	Q9NZM3	1697 aa		10.4	□□□□□ -0.74
CCNB3-204	ENST00000376042	ABCC5	O15440	1437 aa		10.4	□□□□□ -0.75
CCNB3-204	ENST00000376042	A2M	P01023	1474 aa		10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms