RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 NUTM2FA1L443 756 aa22.08■■□□□ 1.13
MCF2L-203ENST00000375604 CSB-PGBD3P0DP91 1061 aa22.05■■□□□ 1.12
MCF2L-203ENST00000375604 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
MCF2L-203ENST00000375604 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
MCF2L-203ENST00000375604 CLSTN1O94985 981 aa22.04■■□□□ 1.12
MCF2L-203ENST00000375604 CCDC9Q9Y3X0 531 aaKnown RBP22.03■■□□□ 1.12
MCF2L-203ENST00000375604 HNRNPMP52272 730 aaKnown RBP eCLIP22.03■■□□□ 1.12
MCF2L-203ENST00000375604 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
MCF2L-203ENST00000375604 GLIPR1L2Q4G1C9 344 aa22.02■■□□□ 1.11
MCF2L-203ENST00000375604 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
MCF2L-203ENST00000375604 ARHGAP35Q9NRY4 1499 aa21.99■■□□□ 1.11
MCF2L-203ENST00000375604 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-203ENST00000375604 CCDC146Q8IYE0 955 aa21.98■■□□□ 1.11
MCF2L-203ENST00000375604 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
MCF2L-203ENST00000375604 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
MCF2L-203ENST00000375604 U2AF1L5P0DN76 240 aaPredicted RBP21.96■■□□□ 1.11
MCF2L-203ENST00000375604 U2AF1Q01081 240 aaKnown RBP eCLIP21.96■■□□□ 1.11
MCF2L-203ENST00000375604 HDGFL2Q7Z4V5 671 aaPredicted RBP21.96■■□□□ 1.11
MCF2L-203ENST00000375604 HDGFP51858 240 aaKnown RBP21.95■■□□□ 1.1
MCF2L-203ENST00000375604 SETD5Q9C0A6 1442 aa21.95■■□□□ 1.1
MCF2L-203ENST00000375604 NOP58Q9Y2X3 529 aaKnown RBP21.94■■□□□ 1.1
MCF2L-203ENST00000375604 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
MCF2L-203ENST00000375604 LTV1Q96GA3 475 aaPredicted RBP21.94■■□□□ 1.1
MCF2L-203ENST00000375604 NAP1L5Q96NT1 182 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-203ENST00000375604 ITPRIPQ8IWB1 547 aa21.93■■□□□ 1.1
MCF2L-203ENST00000375604 MPHOSPH9Q99550 1183 aa21.91■■□□□ 1.1
MCF2L-203ENST00000375604 KIF3BO15066 747 aa21.91■■□□□ 1.1
MCF2L-203ENST00000375604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.91■■□□□ 1.15e-6■■■■□ 20.3
MCF2L-203ENST00000375604 CHMP3Q9Y3E7 222 aa21.91■■□□□ 1.1
MCF2L-203ENST00000375604 NUP155O75694 1391 aa21.9■■□□□ 1.1
MCF2L-203ENST00000375604 HSCBQ8IWL3 235 aa21.89■■□□□ 1.09
MCF2L-203ENST00000375604 KTN1Q86UP2 1357 aaKnown RBP21.88■■□□□ 1.09
MCF2L-203ENST00000375604 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
MCF2L-203ENST00000375604 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.86■■□□□ 1.09
MCF2L-203ENST00000375604 ANP32EQ9BTT0 268 aa21.85■■□□□ 1.09
MCF2L-203ENST00000375604 GOLGA6L4A6NEF3 574 aa21.85■■□□□ 1.09
MCF2L-203ENST00000375604 MS4A1P11836 297 aa21.84■■□□□ 1.09
MCF2L-203ENST00000375604 RAB3GAP2Q9H2M9 1393 aa21.83■■□□□ 1.09
MCF2L-203ENST00000375604 SLC4A10Q6U841 1118 aa21.82■■□□□ 1.08
MCF2L-203ENST00000375604 GNL2Q13823 731 aaKnown RBP21.81■■□□□ 1.08
MCF2L-203ENST00000375604 NOL8Q76FK4 1167 aaKnown RBP21.81■■□□□ 1.08
MCF2L-203ENST00000375604 CLUAP1Q96AJ1 413 aa21.81■■□□□ 1.08
MCF2L-203ENST00000375604 CHMP4BQ9H444 224 aaKnown RBP21.81■■□□□ 1.08
MCF2L-203ENST00000375604 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
MCF2L-203ENST00000375604 FOXD4L1Q9NU39 408 aa21.8■■□□□ 1.08
MCF2L-203ENST00000375604 RRP7AQ9Y3A4 280 aaKnown RBP21.8■■□□□ 1.08
MCF2L-203ENST00000375604 DRC7Q8IY82 874 aa21.79■■□□□ 1.08
MCF2L-203ENST00000375604 FHOD3Q2V2M9 1422 aa21.79■■□□□ 1.08
MCF2L-203ENST00000375604 ERICH6BQ5W0A0 696 aa21.79■■□□□ 1.08
MCF2L-203ENST00000375604 GZF1Q9H116 711 aaPredicted RBP21.79■■□□□ 1.08
MCF2L-203ENST00000375604 TRAK1Q9UPV9 953 aa21.79■■□□□ 1.08
MCF2L-203ENST00000375604 WIZO95785 1651 aa21.78■■□□□ 1.08
MCF2L-203ENST00000375604 MCCP23508 829 aa21.77■■□□□ 1.08
MCF2L-203ENST00000375604 NGDNQ8NEJ9 315 aaKnown RBP21.77■■□□□ 1.08
MCF2L-203ENST00000375604 WASHC2CQ9Y4E1 1318 aa21.77■■□□□ 1.07
MCF2L-203ENST00000375604 RCAN3Q9UKA8 241 aa21.75■■□□□ 1.07
MCF2L-203ENST00000375604 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
MCF2L-203ENST00000375604 SLKQ9H2G2 1235 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-203ENST00000375604 MFAP1P55081 439 aaKnown RBP21.73■■□□□ 1.07
MCF2L-203ENST00000375604 TRIM6-TRIM34B2RNG4 842 aa21.73■■□□□ 1.07
MCF2L-203ENST00000375604 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
MCF2L-203ENST00000375604 SMC4Q9NTJ3 1288 aa21.72■■□□□ 1.07
MCF2L-203ENST00000375604 GOLGA6L6A8MZA4 724 aa21.72■■□□□ 1.07
MCF2L-203ENST00000375604 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
MCF2L-203ENST00000375604 ARID3AQ99856 593 aa21.72■■□□□ 1.07
MCF2L-203ENST00000375604 ANO8Q9HCE9 1232 aaPredicted RBP21.71■■□□□ 1.07
MCF2L-203ENST00000375604 GORABQ5T7V8 394 aa21.71■■□□□ 1.07
MCF2L-203ENST00000375604 TAF7LQ5H9L4 462 aa21.7■■□□□ 1.06
MCF2L-203ENST00000375604 AMPHP49418 695 aa21.7■■□□□ 1.06
MCF2L-203ENST00000375604 ANKRD30AQ9BXX3 1397 aa21.7■■□□□ 1.06
MCF2L-203ENST00000375604 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
MCF2L-203ENST00000375604 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
MCF2L-203ENST00000375604 HSP90B1P14625 803 aaKnown RBP21.69■■□□□ 1.06
MCF2L-203ENST00000375604 ELL2O00472 640 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-203ENST00000375604 FOXD4L5Q5VV16 416 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-203ENST00000375604 FOXD4L4Q8WXT5 416 aaPredicted RBP21.68■■□□□ 1.06
MCF2L-203ENST00000375604 IPO8O15397 1037 aaKnown RBP21.68■■□□□ 1.06
MCF2L-203ENST00000375604 EID1Q9Y6B2 187 aa21.67■■□□□ 1.06
MCF2L-203ENST00000375604 SPAG9O60271 1321 aaKnown RBP21.67■■□□□ 1.06
MCF2L-203ENST00000375604 PDE4CQ08493 712 aa21.66■■□□□ 1.06
MCF2L-203ENST00000375604 NGEFQ8N5V2 710 aa21.66■■□□□ 1.06
MCF2L-203ENST00000375604 RBM19Q9Y4C8 960 aaKnown RBP21.65■■□□□ 1.06
MCF2L-203ENST00000375604 BCL2L13Q9BXK5 485 aa21.64■■□□□ 1.06
MCF2L-203ENST00000375604 STK31Q9BXU1 1019 aa21.64■■□□□ 1.06
MCF2L-203ENST00000375604 CYB5RLQ6IPT4 315 aa21.63■■□□□ 1.05
MCF2L-203ENST00000375604 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
MCF2L-203ENST00000375604 G3V3G9 751 aa21.62■■□□□ 1.05
MCF2L-203ENST00000375604 DCAF8Q5TAQ9 597 aa21.62■■□□□ 1.05
MCF2L-203ENST00000375604 NECTIN2Q92692 538 aa21.61■■□□□ 1.05
MCF2L-203ENST00000375604 CREBRFQ8IUR6 639 aa21.6■■□□□ 1.05
MCF2L-203ENST00000375604 RWDD1Q9H446 243 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-203ENST00000375604 PLIN1O60240 522 aa21.6■■□□□ 1.05
MCF2L-203ENST00000375604 EIF3AQ14152 1382 aaKnown RBP21.59■■□□□ 1.05
MCF2L-203ENST00000375604 RALBP1Q15311 655 aa21.59■■□□□ 1.05
MCF2L-203ENST00000375604 TERF2IPQ9NYB0 399 aa21.59■■□□□ 1.05
MCF2L-203ENST00000375604 TMX4Q9H1E5 349 aaPredicted RBP21.59■■□□□ 1.05
MCF2L-203ENST00000375604 DEKP35659 375 aaKnown RBP21.58■■□□□ 1.04
MCF2L-203ENST00000375604 FMN1Q68DA7 1419 aa21.58■■□□□ 1.04
MCF2L-203ENST00000375604 TOMM22Q9NS69 142 aa21.57■■□□□ 1.04
MCF2L-203ENST00000375604 MSNP26038 577 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms