RNA–Protein interactions for RNA: ENST00000374708.8

COL11A2-203, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL11A2, Length 6,209 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-203ENST00000374708 ERICH6BQ5W0A0 696 aa18.97■□□□□ 0.63
COL11A2-203ENST00000374708 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
COL11A2-203ENST00000374708 GNL2Q13823 731 aaKnown RBP18.96■□□□□ 0.63
COL11A2-203ENST00000374708 TMX4Q9H1E5 349 aaPredicted RBP18.96■□□□□ 0.63
COL11A2-203ENST00000374708 ZNF330Q9Y3S2 320 aaPredicted RBP18.94■□□□□ 0.62
COL11A2-203ENST00000374708 CARMIL1Q5VZK9 1371 aa18.94■□□□□ 0.62
COL11A2-203ENST00000374708 NAP1L5Q96NT1 182 aaPredicted RBP18.92■□□□□ 0.62
COL11A2-203ENST00000374708 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
COL11A2-203ENST00000374708 CALD1Q05682 793 aaKnown RBP18.92■□□□□ 0.62
COL11A2-203ENST00000374708 CUX2O14529 1486 aa18.91■□□□□ 0.62
COL11A2-203ENST00000374708 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
COL11A2-203ENST00000374708 CCDC9Q9Y3X0 531 aaKnown RBP18.91■□□□□ 0.62
COL11A2-203ENST00000374708 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.62
COL11A2-203ENST00000374708 APBB1O00213 710 aa18.88■□□□□ 0.61
COL11A2-203ENST00000374708 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
COL11A2-203ENST00000374708 KTN1Q86UP2 1357 aaKnown RBP18.88■□□□□ 0.61
COL11A2-203ENST00000374708 CHAF1AQ13111 956 aaPredicted RBP18.87■□□□□ 0.61
COL11A2-203ENST00000374708 DRC7Q8IY82 874 aa18.87■□□□□ 0.61
COL11A2-203ENST00000374708 L1TD1Q5T7N2 865 aaKnown RBP18.87■□□□□ 0.61
COL11A2-203ENST00000374708 PKD2Q13563 968 aa18.87■□□□□ 0.61
COL11A2-203ENST00000374708 B4GALNT3Q6L9W6 998 aa18.86■□□□□ 0.61
COL11A2-203ENST00000374708 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
COL11A2-203ENST00000374708 ARHGAP35Q9NRY4 1499 aa18.84■□□□□ 0.61
COL11A2-203ENST00000374708 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
COL11A2-203ENST00000374708 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL11A2-203ENST00000374708 TIMELESSQ9UNS1 1208 aa18.83■□□□□ 0.61
COL11A2-203ENST00000374708 GORABQ5T7V8 394 aa18.82■□□□□ 0.6
COL11A2-203ENST00000374708 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
COL11A2-203ENST00000374708 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
COL11A2-203ENST00000374708 SPAG9O60271 1321 aaKnown RBP18.82■□□□□ 0.6
COL11A2-203ENST00000374708 KIAA2012Q0VF49 1180 aa18.82■□□□□ 0.6
COL11A2-203ENST00000374708 EFCAB2Q5VUJ9 269 aa18.81■□□□□ 0.6
COL11A2-203ENST00000374708 ROCK2O75116 1388 aaKnown RBP18.81■□□□□ 0.6
COL11A2-203ENST00000374708 HSPA5P11021 654 aaKnown RBP18.81■□□□□ 0.6
COL11A2-203ENST00000374708 EID1Q9Y6B2 187 aa18.81■□□□□ 0.6
COL11A2-203ENST00000374708 TAF7LQ5H9L4 462 aa18.8■□□□□ 0.6
COL11A2-203ENST00000374708 STK31Q9BXU1 1019 aa18.8■□□□□ 0.6
COL11A2-203ENST00000374708 ITPRIPQ8IWB1 547 aa18.79■□□□□ 0.6
COL11A2-203ENST00000374708 CHMP3Q9Y3E7 222 aa18.79■□□□□ 0.6
COL11A2-203ENST00000374708 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
COL11A2-203ENST00000374708 EIF3AQ14152 1382 aaKnown RBP18.79■□□□□ 0.6
COL11A2-203ENST00000374708 G3V3G9 751 aa18.79■□□□□ 0.6
COL11A2-203ENST00000374708 DCAF8Q5TAQ9 597 aa18.79■□□□□ 0.6
COL11A2-203ENST00000374708 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
COL11A2-203ENST00000374708 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
COL11A2-203ENST00000374708 GPATCH3Q96I76 525 aa18.77■□□□□ 0.6
COL11A2-203ENST00000374708 HTATSF1O43719 755 aaKnown RBP18.76■□□□□ 0.59
COL11A2-203ENST00000374708 RWDD1Q9H446 243 aaPredicted RBP18.76■□□□□ 0.59
COL11A2-203ENST00000374708 HDAC5Q9UQL6 1122 aa18.76■□□□□ 0.59
COL11A2-203ENST00000374708 FOXD1Q16676 465 aa18.74■□□□□ 0.59
COL11A2-203ENST00000374708 TERF2IPQ9NYB0 399 aa18.74■□□□□ 0.59
COL11A2-203ENST00000374708 NUP155O75694 1391 aa18.74■□□□□ 0.59
COL11A2-203ENST00000374708 CCER2I3L3R5 266 aa18.74■□□□□ 0.59
COL11A2-203ENST00000374708 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
COL11A2-203ENST00000374708 ANKRD30AQ9BXX3 1397 aa18.73■□□□□ 0.59
COL11A2-203ENST00000374708 RALBP1Q15311 655 aa18.72■□□□□ 0.59
COL11A2-203ENST00000374708 KIF3BO15066 747 aa18.72■□□□□ 0.59
COL11A2-203ENST00000374708 PDS5BQ9NTI5 1447 aa18.71■□□□□ 0.59
COL11A2-203ENST00000374708 PTMSP20962 102 aa18.71■□□□□ 0.59
COL11A2-203ENST00000374708 RTN4Q9NQC3 1192 aaKnown RBP18.7■□□□□ 0.58
COL11A2-203ENST00000374708 GBP4Q96PP9 640 aa18.7■□□□□ 0.58
COL11A2-203ENST00000374708 HSP90B1P14625 803 aaKnown RBP18.69■□□□□ 0.58
COL11A2-203ENST00000374708 HMMRO75330 724 aa18.69■□□□□ 0.58
COL11A2-203ENST00000374708 AMPHP49418 695 aa18.69■□□□□ 0.58
COL11A2-203ENST00000374708 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
COL11A2-203ENST00000374708 CCDC34Q96HJ3 373 aa18.68■□□□□ 0.58
COL11A2-203ENST00000374708 TPM4P67936 248 aa18.67■□□□□ 0.58
COL11A2-203ENST00000374708 TRIM6-TRIM34B2RNG4 842 aa18.67■□□□□ 0.58
COL11A2-203ENST00000374708 NOC3LQ8WTT2 800 aaKnown RBP18.67■□□□□ 0.58
COL11A2-203ENST00000374708 RCAN3Q9UKA8 241 aa18.67■□□□□ 0.58
COL11A2-203ENST00000374708 WASHC2CQ9Y4E1 1318 aa18.67■□□□□ 0.58
COL11A2-203ENST00000374708 GTF2E1P29083 439 aaPredicted RBP18.67■□□□□ 0.58
COL11A2-203ENST00000374708 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
COL11A2-203ENST00000374708 SMC4Q9NTJ3 1288 aa18.66■□□□□ 0.58
COL11A2-203ENST00000374708 SOGA1O94964 1423 aa18.66■□□□□ 0.58
COL11A2-203ENST00000374708 LMOD3Q0VAK6 560 aa18.66■□□□□ 0.58
COL11A2-203ENST00000374708 SLC4A10Q6U841 1118 aa18.65■□□□□ 0.58
COL11A2-203ENST00000374708 FRAT2O75474 233 aaPredicted RBP18.65■□□□□ 0.58
COL11A2-203ENST00000374708 NUTM2DQ5VT03 806 aaPredicted RBP18.65■□□□□ 0.58
COL11A2-203ENST00000374708 FMN1Q68DA7 1419 aa18.64■□□□□ 0.57
COL11A2-203ENST00000374708 RASSF8Q8NHQ8 419 aa18.64■□□□□ 0.57
COL11A2-203ENST00000374708 LTV1Q96GA3 475 aaPredicted RBP18.64■□□□□ 0.57
COL11A2-203ENST00000374708 SYAP1Q96A49 352 aaPredicted RBP18.63■□□□□ 0.57
COL11A2-203ENST00000374708 PRM3Q9NNZ6 103 aa18.63■□□□□ 0.57
COL11A2-203ENST00000374708 HNRNPMP52272 730 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL11A2-203ENST00000374708 TOMM22Q9NS69 142 aa18.6■□□□□ 0.57
COL11A2-203ENST00000374708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL11A2-203ENST00000374708 TDRD9Q8NDG6 1382 aaKnown RBP18.59■□□□□ 0.57
COL11A2-203ENST00000374708 VPS8Q8N3P4 1428 aa18.59■□□□□ 0.57
COL11A2-203ENST00000374708 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.56
COL11A2-203ENST00000374708 CSPP1Q1MSJ5 1256 aa18.58■□□□□ 0.56
COL11A2-203ENST00000374708 NUTM2FA1L443 756 aa18.58■□□□□ 0.56
COL11A2-203ENST00000374708 RSPH4AQ5TD94 716 aa18.58■□□□□ 0.56
COL11A2-203ENST00000374708 VPS53Q5VIR6 699 aa18.57■□□□□ 0.56
COL11A2-203ENST00000374708 MARCH6O60337 910 aa18.57■□□□□ 0.56
COL11A2-203ENST00000374708 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
COL11A2-203ENST00000374708 KANK4Q5T7N3 995 aaPredicted RBP18.55■□□□□ 0.56
COL11A2-203ENST00000374708 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
COL11A2-203ENST00000374708 EVA1CP58658 441 aa18.54■□□□□ 0.56
COL11A2-203ENST00000374708 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms