RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MYOM3Q5VTT5 1437 aa20.08■□□□□ 0.8
HMGCL-203ENST00000374490 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
HMGCL-203ENST00000374490 NUP153P49790 1475 aaKnown RBP20.07■□□□□ 0.8
HMGCL-203ENST00000374490 NCOA2Q15596 1464 aa20.07■□□□□ 0.8
HMGCL-203ENST00000374490 HFM1A2PYH4 1435 aa20.05■□□□□ 0.8
HMGCL-203ENST00000374490 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
HMGCL-203ENST00000374490 MAGI3Q5TCQ9 1506 aa20.03■□□□□ 0.8
HMGCL-203ENST00000374490 ABCA8O94911 1581 aa20.02■□□□□ 0.8
HMGCL-203ENST00000374490 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
HMGCL-203ENST00000374490 PPRC1Q5VV67 1664 aaKnown RBP20■□□□□ 0.79
HMGCL-203ENST00000374490 ZCCHC11Q5TAX3 1644 aaKnown RBP20■□□□□ 0.79
HMGCL-203ENST00000374490 WDR7Q9Y4E6 1490 aa20■□□□□ 0.79
HMGCL-203ENST00000374490 PTPN23Q9H3S7 1636 aa20■□□□□ 0.79
HMGCL-203ENST00000374490 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
HMGCL-203ENST00000374490 CDK11AQ9UQ88 783 aaPredicted RBP19.98■□□□□ 0.79
HMGCL-203ENST00000374490 TCOF1Q13428 1488 aaKnown RBP19.98■□□□□ 0.79
HMGCL-203ENST00000374490 MAP3K4Q9Y6R4 1608 aa19.97■□□□□ 0.79
HMGCL-203ENST00000374490 ADGRL1O94910 1474 aa19.95■□□□□ 0.78
HMGCL-203ENST00000374490 AKNAQ7Z591 1439 aa19.94■□□□□ 0.78
HMGCL-203ENST00000374490 NAIPQ13075 1403 aa19.93■□□□□ 0.78
HMGCL-203ENST00000374490 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
HMGCL-203ENST00000374490 PTPRKQ15262 1439 aa19.92■□□□□ 0.78
HMGCL-203ENST00000374490 MIA2Q96PC5 1412 aa19.92■□□□□ 0.78
HMGCL-203ENST00000374490 CD109Q6YHK3 1445 aa19.92■□□□□ 0.78
HMGCL-203ENST00000374490 SIN3AQ96ST3 1273 aa19.91■□□□□ 0.78
HMGCL-203ENST00000374490 TROQ12816 1431 aaPredicted RBP19.9■□□□□ 0.78
HMGCL-203ENST00000374490 PPP1R15AO75807 674 aaPredicted RBP19.89■□□□□ 0.77
HMGCL-203ENST00000374490 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
HMGCL-203ENST00000374490 TONSLQ96HA7 1378 aa19.87■□□□□ 0.77
HMGCL-203ENST00000374490 ATP10BO94823 1461 aa19.87■□□□□ 0.77
HMGCL-203ENST00000374490 ITSN2Q9NZM3 1697 aa19.83■□□□□ 0.77
HMGCL-203ENST00000374490 KIF14Q15058 1648 aa19.83■□□□□ 0.76
HMGCL-203ENST00000374490 PLEKHD1A6NEE1 506 aa19.82■□□□□ 0.76
HMGCL-203ENST00000374490 ROCK1Q13464 1354 aa19.75■□□□□ 0.75
HMGCL-203ENST00000374490 ARAP3Q8WWN8 1544 aa19.72■□□□□ 0.75
HMGCL-203ENST00000374490 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
HMGCL-203ENST00000374490 DDX10Q13206 875 aaKnown RBP19.7■□□□□ 0.74
HMGCL-203ENST00000374490 ILDR1Q86SU0 546 aaPredicted RBP19.7■□□□□ 0.74
HMGCL-203ENST00000374490 CDC42BPAQ5VT25 1732 aa19.7■□□□□ 0.74
HMGCL-203ENST00000374490 CCER2I3L3R5 266 aa19.69■□□□□ 0.74
HMGCL-203ENST00000374490 DNMT1P26358 1616 aaKnown RBP19.69■□□□□ 0.74
HMGCL-203ENST00000374490 DAPK1P53355 1430 aa19.68■□□□□ 0.74
HMGCL-203ENST00000374490 HECW2Q9P2P5 1572 aa19.68■□□□□ 0.74
HMGCL-203ENST00000374490 RRP7BPQ9NSQ0 103 aa19.68■□□□□ 0.74
HMGCL-203ENST00000374490 CFDP1Q9UEE9 299 aaPredicted RBP19.68■□□□□ 0.74
HMGCL-203ENST00000374490 CAMSAP2Q08AD1 1489 aa19.66■□□□□ 0.74
HMGCL-203ENST00000374490 ABCA9Q8IUA7 1624 aa19.65■□□□□ 0.74
HMGCL-203ENST00000374490 ANP32CO43423 234 aa19.65■□□□□ 0.74
HMGCL-203ENST00000374490 NEO1Q92859 1461 aa19.64■□□□□ 0.73
HMGCL-203ENST00000374490 RAPGEF3O95398 923 aa19.64■□□□□ 0.73
HMGCL-203ENST00000374490 CHIC2Q9UKJ5 165 aa19.64■□□□□ 0.73
HMGCL-203ENST00000374490 TRIM52Q96A61 297 aa19.63■□□□□ 0.73
HMGCL-203ENST00000374490 DENND4BO75064 1496 aaPredicted RBP19.63■□□□□ 0.73
HMGCL-203ENST00000374490 PREX2Q70Z35 1606 aa19.63■□□□□ 0.73
HMGCL-203ENST00000374490 ABCC5O15440 1437 aa19.62■□□□□ 0.73
HMGCL-203ENST00000374490 MPHOSPH9Q99550 1183 aa19.61■□□□□ 0.73
HMGCL-203ENST00000374490 MYO5CQ9NQX4 1742 aa19.6■□□□□ 0.73
HMGCL-203ENST00000374490 TTC37Q6PGP7 1564 aa19.59■□□□□ 0.73
HMGCL-203ENST00000374490 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
HMGCL-203ENST00000374490 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
HMGCL-203ENST00000374490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.59■□□□□ 0.73
HMGCL-203ENST00000374490 CROCC2H7BZ55 1655 aa19.58■□□□□ 0.73
HMGCL-203ENST00000374490 CDC42BPBQ9Y5S2 1711 aa19.57■□□□□ 0.72
HMGCL-203ENST00000374490 ADGBQ8N7X0 1667 aa19.57■□□□□ 0.72
HMGCL-203ENST00000374490 ARID4BQ4LE39 1312 aaPredicted RBP19.56■□□□□ 0.72
HMGCL-203ENST00000374490 SUPT16HQ9Y5B9 1047 aaKnown RBP19.56■□□□□ 0.72
HMGCL-203ENST00000374490 ARHGAP5Q13017 1502 aa19.54■□□□□ 0.72
HMGCL-203ENST00000374490 ADGRL2O95490 1459 aa19.53■□□□□ 0.72
HMGCL-203ENST00000374490 RPRD2Q5VT52 1461 aaKnown RBP19.53■□□□□ 0.72
HMGCL-203ENST00000374490 PTPRMP28827 1452 aa19.53■□□□□ 0.72
HMGCL-203ENST00000374490 ANKRD30BQ9BXX2 1392 aa19.52■□□□□ 0.72
HMGCL-203ENST00000374490 HIRIP3Q9BW71 556 aaPredicted RBP19.51■□□□□ 0.71
HMGCL-203ENST00000374490 SAMD9LQ8IVG5 1584 aa19.51■□□□□ 0.71
HMGCL-203ENST00000374490 ARHGEF5Q12774 1597 aa19.51■□□□□ 0.71
HMGCL-203ENST00000374490 FANCAO15360 1455 aa19.49■□□□□ 0.71
HMGCL-203ENST00000374490 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
HMGCL-203ENST00000374490 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
HMGCL-203ENST00000374490 FRMPD1Q5SYB0 1578 aa19.47■□□□□ 0.71
HMGCL-203ENST00000374490 HSPA5P11021 654 aaKnown RBP19.47■□□□□ 0.71
HMGCL-203ENST00000374490 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
HMGCL-203ENST00000374490 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
HMGCL-203ENST00000374490 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
HMGCL-203ENST00000374490 PLCH2O75038 1416 aa19.45■□□□□ 0.7
HMGCL-203ENST00000374490 CCDC141Q6ZP82 1450 aa19.45■□□□□ 0.7
HMGCL-203ENST00000374490 ANKRD30AQ9BXX3 1397 aa19.45■□□□□ 0.7
HMGCL-203ENST00000374490 L3MBTL2Q969R5 705 aa19.44■□□□□ 0.7
HMGCL-203ENST00000374490 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
HMGCL-203ENST00000374490 SYCP2Q9BX26 1530 aa19.44■□□□□ 0.7
HMGCL-203ENST00000374490 PZPP20742 1482 aa19.43■□□□□ 0.7
HMGCL-203ENST00000374490 ARHGEF40Q8TER5 1519 aa19.43■□□□□ 0.7
HMGCL-203ENST00000374490 CFAP74Q9C0B2 1584 aa19.43■□□□□ 0.7
HMGCL-203ENST00000374490 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
HMGCL-203ENST00000374490 MBD5Q9P267 1494 aa19.42■□□□□ 0.7
HMGCL-203ENST00000374490 TSPY4P0CV99 314 aa19.42■□□□□ 0.7
HMGCL-203ENST00000374490 TSPY10P0CW01 314 aa19.42■□□□□ 0.7
HMGCL-203ENST00000374490 RSPH4AQ5TD94 716 aa19.42■□□□□ 0.7
HMGCL-203ENST00000374490 POGZQ7Z3K3 1410 aa19.42■□□□□ 0.7
HMGCL-203ENST00000374490 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
HMGCL-203ENST00000374490 BCORL1Q5H9F3 1711 aa19.41■□□□□ 0.7
HMGCL-203ENST00000374490 HNRNPMP52272 730 aaKnown RBP eCLIP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms