RNA–Protein interactions for RNA: ENST00000373899.3

TFAM-202, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 1,121 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-202ENST00000373899 AKNAQ7Z591 1439 aa22.08■■□□□ 1.13
TFAM-202ENST00000373899 FANCAO15360 1455 aa22.07■■□□□ 1.12
TFAM-202ENST00000373899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
TFAM-202ENST00000373899 HNRNPUL2Q1KMD3 747 aaKnown RBP22.05■■□□□ 1.12
TFAM-202ENST00000373899 EFCAB5A4FU69 1503 aa22.05■■□□□ 1.12
TFAM-202ENST00000373899 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
TFAM-202ENST00000373899 UBTFP17480 764 aaKnown RBP22.03■■□□□ 1.12
TFAM-202ENST00000373899 YEATS2Q9ULM3 1422 aa22.02■■□□□ 1.12
TFAM-202ENST00000373899 RANGAP1P46060 587 aaPredicted RBP22.01■■□□□ 1.11
TFAM-202ENST00000373899 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
TFAM-202ENST00000373899 ZFYVE16Q7Z3T8 1539 aa22.01■■□□□ 1.11
TFAM-202ENST00000373899 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
TFAM-202ENST00000373899 ARID4BQ4LE39 1312 aaPredicted RBP22■■□□□ 1.11
TFAM-202ENST00000373899 HECW1Q76N89 1606 aa21.99■■□□□ 1.11
TFAM-202ENST00000373899 MAGI2Q86UL8 1455 aa21.96■■□□□ 1.11
TFAM-202ENST00000373899 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
TFAM-202ENST00000373899 FER1L4A9Z1Z3 1794 aa21.94■■□□□ 1.1
TFAM-202ENST00000373899 PLCH2O75038 1416 aa21.93■■□□□ 1.1
TFAM-202ENST00000373899 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
TFAM-202ENST00000373899 SCAPERQ9BY12 1400 aa21.89■■□□□ 1.1
TFAM-202ENST00000373899 HSPA2P54652 639 aa21.89■■□□□ 1.09
TFAM-202ENST00000373899 CACNB1Q02641 598 aaPredicted RBP21.89■■□□□ 1.09
TFAM-202ENST00000373899 NCBP3Q53F19 620 aaKnown RBP21.89■■□□□ 1.09
TFAM-202ENST00000373899 MYO5CQ9NQX4 1742 aa21.89■■□□□ 1.09
TFAM-202ENST00000373899 KIF14Q15058 1648 aa21.87■■□□□ 1.09
TFAM-202ENST00000373899 LRRIQ1Q96JM4 1722 aa21.85■■□□□ 1.09
TFAM-202ENST00000373899 ARHGAP35Q9NRY4 1499 aa21.84■■□□□ 1.09
TFAM-202ENST00000373899 ATP10AO60312 1499 aa21.83■■□□□ 1.09
TFAM-202ENST00000373899 KDM5CP41229 1560 aa21.82■■□□□ 1.08
TFAM-202ENST00000373899 PREX1Q8TCU6 1659 aa21.82■■□□□ 1.08
TFAM-202ENST00000373899 C9orf84Q5VXU9 1444 aa21.82■■□□□ 1.08
TFAM-202ENST00000373899 RNF39Q9H2S5 420 aa21.82■■□□□ 1.08
TFAM-202ENST00000373899 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
TFAM-202ENST00000373899 MLECQ14165 292 aa21.79■■□□□ 1.08
TFAM-202ENST00000373899 DIP2CQ9Y2E4 1556 aa21.77■■□□□ 1.08
TFAM-202ENST00000373899 STRCQ7RTU9 1775 aa21.76■■□□□ 1.07
TFAM-202ENST00000373899 ZNF518AQ6AHZ1 1483 aa21.76■■□□□ 1.07
TFAM-202ENST00000373899 CDC42BPBQ9Y5S2 1711 aa21.75■■□□□ 1.07
TFAM-202ENST00000373899 REREQ9P2R6 1566 aa21.75■■□□□ 1.07
TFAM-202ENST00000373899 TROQ12816 1431 aaPredicted RBP21.75■■□□□ 1.07
TFAM-202ENST00000373899 EFCAB2Q5VUJ9 269 aa21.74■■□□□ 1.07
TFAM-202ENST00000373899 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
TFAM-202ENST00000373899 ABCA6Q8N139 1617 aa21.73■■□□□ 1.07
TFAM-202ENST00000373899 CERKQ8TCT0 537 aa21.72■■□□□ 1.07
TFAM-202ENST00000373899 ARHGAP5Q13017 1502 aa21.71■■□□□ 1.07
TFAM-202ENST00000373899 CEBPAP49715 358 aaPredicted RBP21.7■■□□□ 1.06
TFAM-202ENST00000373899 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
TFAM-202ENST00000373899 LOC105371045A0A1W2PR82 267 aa21.68■■□□□ 1.06
TFAM-202ENST00000373899 AFAP1Q8N556 730 aa21.68■■□□□ 1.06
TFAM-202ENST00000373899 ABCC1P33527 1531 aa21.68■■□□□ 1.06
TFAM-202ENST00000373899 C3P01024 1663 aa21.67■■□□□ 1.06
TFAM-202ENST00000373899 MLH3Q9UHC1 1453 aa21.67■■□□□ 1.06
TFAM-202ENST00000373899 ITSN2Q9NZM3 1697 aa21.66■■□□□ 1.06
TFAM-202ENST00000373899 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
TFAM-202ENST00000373899 AGLP35573 1532 aa21.65■■□□□ 1.06
TFAM-202ENST00000373899 SETD1BQ9UPS6 1966 aaKnown RBP21.65■■□□□ 1.06
TFAM-202ENST00000373899 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.05
TFAM-202ENST00000373899 CLIP1P30622 1438 aa21.63■■□□□ 1.05
TFAM-202ENST00000373899 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
TFAM-202ENST00000373899 KIDINS220Q9ULH0 1771 aa21.63■■□□□ 1.05
TFAM-202ENST00000373899 UHRF1BP1Q6BDS2 1440 aa21.62■■□□□ 1.05
TFAM-202ENST00000373899 CDC42BPAQ5VT25 1732 aa21.61■■□□□ 1.05
TFAM-202ENST00000373899 CASKIN1Q8WXD9 1431 aa21.58■■□□□ 1.05
TFAM-202ENST00000373899 CCDC18Q5T9S5 1454 aa21.56■■□□□ 1.04
TFAM-202ENST00000373899 PTPRTO14522 1441 aa21.55■■□□□ 1.04
TFAM-202ENST00000373899 LTBP4Q8N2S1 1624 aa21.54■■□□□ 1.04
TFAM-202ENST00000373899 SAMD9LQ8IVG5 1584 aa21.53■■□□□ 1.04
TFAM-202ENST00000373899 MROH2AA6NES4 1674 aa21.51■■□□□ 1.03
TFAM-202ENST00000373899 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
TFAM-202ENST00000373899 NCOA1Q15788 1441 aa21.49■■□□□ 1.03
TFAM-202ENST00000373899 CNTLNQ9NXG0 1405 aa21.48■■□□□ 1.03
TFAM-202ENST00000373899 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
TFAM-202ENST00000373899 SYCP2Q9BX26 1530 aa21.47■■□□□ 1.03
TFAM-202ENST00000373899 PLXNC1O60486 1568 aa21.46■■□□□ 1.03
TFAM-202ENST00000373899 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
TFAM-202ENST00000373899 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
TFAM-202ENST00000373899 INO80Q9ULG1 1556 aaPredicted RBP21.45■■□□□ 1.02
TFAM-202ENST00000373899 C1QBPQ07021 282 aaKnown RBP21.45■■□□□ 1.02
TFAM-202ENST00000373899 NPATQ14207 1427 aa21.44■■□□□ 1.02
TFAM-202ENST00000373899 ILDR2Q71H61 639 aa21.43■■□□□ 1.02
TFAM-202ENST00000373899 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
TFAM-202ENST00000373899 SUPT6HQ7KZ85 1726 aaKnown RBP21.43■■□□□ 1.02
TFAM-202ENST00000373899 ZNF142P52746 1687 aaPredicted RBP21.42■■□□□ 1.02
TFAM-202ENST00000373899 CAMSAP1Q5T5Y3 1602 aa21.42■■□□□ 1.02
TFAM-202ENST00000373899 ATP7AQ04656 1500 aa21.41■■□□□ 1.02
TFAM-202ENST00000373899 CLTCQ00610 1675 aaKnown RBP21.4■■□□□ 1.02
TFAM-202ENST00000373899 MYO3AQ8NEV4 1616 aa21.39■■□□□ 1.01
TFAM-202ENST00000373899 DISP3Q9P2K9 1392 aa21.38■■□□□ 1.01
TFAM-202ENST00000373899 ESF1Q9H501 851 aaKnown RBP21.38■■□□□ 1.01
TFAM-202ENST00000373899 SPATA31D1Q6ZQQ2 1576 aa21.38■■□□□ 1.01
TFAM-202ENST00000373899 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
TFAM-202ENST00000373899 ZMYM3Q14202 1370 aa21.37■■□□□ 1.01
TFAM-202ENST00000373899 SPAG9O60271 1321 aaKnown RBP21.34■■□□□ 1.01
TFAM-202ENST00000373899 HNRNPMP52272 730 aaKnown RBP eCLIP21.34■■□□□ 1.011e-7■□□□□ 8.5
TFAM-202ENST00000373899 A2MP01023 1474 aa21.33■■□□□ 1.01
TFAM-202ENST00000373899 CEP170BQ9Y4F5 1589 aaPredicted RBP21.33■■□□□ 1.01
TFAM-202ENST00000373899 PTPRKQ15262 1439 aa21.33■■□□□ 1.01
TFAM-202ENST00000373899 PLA2R1Q13018 1463 aa21.32■■□□□ 1
TFAM-202ENST00000373899 TCOF1Q13428 1488 aaKnown RBP21.32■■□□□ 1
TFAM-202ENST00000373899 ZNF777Q9ULD5 760 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms