RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 CDK13Q14004 1512 aaKnown RBP10.54□□□□□ -0.72
HERC4-202ENST00000373700 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.722e-6■■■■□ 19.5
HERC4-202ENST00000373700 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
HERC4-202ENST00000373700 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
HERC4-202ENST00000373700 OSCARQ8IYS5 282 aa10.52□□□□□ -0.72
HERC4-202ENST00000373700 ANKRD30AQ9BXX3 1397 aa10.52□□□□□ -0.72
HERC4-202ENST00000373700 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
HERC4-202ENST00000373700 AFAP1Q8N556 730 aa10.51□□□□□ -0.73
HERC4-202ENST00000373700 TIMELESSQ9UNS1 1208 aa10.51□□□□□ -0.73
HERC4-202ENST00000373700 TNNT2P45379 298 aaPredicted RBP10.5□□□□□ -0.73
HERC4-202ENST00000373700 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
HERC4-202ENST00000373700 SPAG9O60271 1321 aaKnown RBP10.5□□□□□ -0.73
HERC4-202ENST00000373700 RRBP1Q9P2E9 1410 aaKnown RBP10.5□□□□□ -0.73
HERC4-202ENST00000373700 PCF11O94913 1555 aaKnown RBP10.5□□□□□ -0.73
HERC4-202ENST00000373700 PLB1Q6P1J6 1458 aa10.49□□□□□ -0.73
HERC4-202ENST00000373700 TIAM1Q13009 1591 aa10.49□□□□□ -0.73
HERC4-202ENST00000373700 RTL5Q5HYW3 569 aaPredicted RBP10.49□□□□□ -0.73
HERC4-202ENST00000373700 FYCO1Q9BQS8 1478 aa10.49□□□□□ -0.73
HERC4-202ENST00000373700 CANXP27824 592 aaKnown RBP10.48□□□□□ -0.73
HERC4-202ENST00000373700 B4GALNT3Q6L9W6 998 aa10.48□□□□□ -0.73
HERC4-202ENST00000373700 SLC24A1O60721 1099 aa10.47□□□□□ -0.73
HERC4-202ENST00000373700 STK26Q9P289 416 aa10.46□□□□□ -0.74
HERC4-202ENST00000373700 CCER2I3L3R5 266 aa10.44□□□□□ -0.74
HERC4-202ENST00000373700 NBR1Q14596 966 aa10.44□□□□□ -0.74
HERC4-202ENST00000373700 KIAA0586Q9BVV6 1533 aa10.43□□□□□ -0.74
HERC4-202ENST00000373700 ANP32AP39687 249 aaKnown RBP10.43□□□□□ -0.74
HERC4-202ENST00000373700 KIF21AQ7Z4S6 1674 aa10.43□□□□□ -0.74
HERC4-202ENST00000373700 IQGAP2Q13576 1575 aa10.43□□□□□ -0.74
HERC4-202ENST00000373700 EPRSP07814 1512 aaKnown RBP10.43□□□□□ -0.74
HERC4-202ENST00000373700 GRIN2AQ12879 1464 aa10.43□□□□□ -0.74
HERC4-202ENST00000373700 ST20-MTHFSA0A0A6YYL1 179 aa10.43□□□□□ -0.74
HERC4-202ENST00000373700 EFCAB5A4FU69 1503 aa10.43□□□□□ -0.74
HERC4-202ENST00000373700 WDR43Q15061 677 aaKnown RBP eCLIP10.42□□□□□ -0.74
HERC4-202ENST00000373700 KIF15Q9NS87 1388 aa10.42□□□□□ -0.74
HERC4-202ENST00000373700 PPM1GO15355 546 aaPredicted RBP10.41□□□□□ -0.74
HERC4-202ENST00000373700 NEUROD2Q15784 382 aa10.41□□□□□ -0.74
HERC4-202ENST00000373700 ROCK2O75116 1388 aaKnown RBP10.4□□□□□ -0.74
HERC4-202ENST00000373700 TSHZ2Q9NRE2 1034 aa10.4□□□□□ -0.74
HERC4-202ENST00000373700 KNSTRNQ9Y448 316 aa10.4□□□□□ -0.74
HERC4-202ENST00000373700 WASHC2CQ9Y4E1 1318 aa10.4□□□□□ -0.75
HERC4-202ENST00000373700 UACAQ9BZF9 1416 aa10.39□□□□□ -0.75
HERC4-202ENST00000373700 SYNJ2O15056 1496 aa10.39□□□□□ -0.75
HERC4-202ENST00000373700 KANK1Q14678 1352 aa10.39□□□□□ -0.75
HERC4-202ENST00000373700 ANKRD50Q9ULJ7 1429 aa10.38□□□□□ -0.75
HERC4-202ENST00000373700 CUL7Q14999 1698 aa10.38□□□□□ -0.75
HERC4-202ENST00000373700 TROQ12816 1431 aaPredicted RBP10.38□□□□□ -0.75
HERC4-202ENST00000373700 NBPF8Q3BBV2 869 aa10.38□□□□□ -0.75
HERC4-202ENST00000373700 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
HERC4-202ENST00000373700 FAM69CQ0P6D2 419 aa10.38□□□□□ -0.75
HERC4-202ENST00000373700 POGKQ9P215 609 aa10.37□□□□□ -0.75
HERC4-202ENST00000373700 RBM19Q9Y4C8 960 aaKnown RBP10.37□□□□□ -0.75
HERC4-202ENST00000373700 RSPH4AQ5TD94 716 aa10.37□□□□□ -0.75
HERC4-202ENST00000373700 NAIPQ13075 1403 aa10.36□□□□□ -0.75
HERC4-202ENST00000373700 RAPGEF3O95398 923 aa10.36□□□□□ -0.75
HERC4-202ENST00000373700 SOX12O15370 315 aa10.36□□□□□ -0.75
HERC4-202ENST00000373700 PPP4R2Q9NY27 417 aa10.36□□□□□ -0.75
HERC4-202ENST00000373700 TRAK1Q9UPV9 953 aa10.36□□□□□ -0.75
HERC4-202ENST00000373700 PTPRKQ15262 1439 aa10.36□□□□□ -0.75
HERC4-202ENST00000373700 TMF1P82094 1093 aa10.35□□□□□ -0.75
HERC4-202ENST00000373700 ZBTB7CA1YPR0 619 aa10.35□□□□□ -0.75
HERC4-202ENST00000373700 ARHGAP5Q13017 1502 aa10.34□□□□□ -0.75
HERC4-202ENST00000373700 C14orf37Q86TY3 774 aa10.34□□□□□ -0.75
HERC4-202ENST00000373700 CCDC144AA2RUR9 1427 aa10.34□□□□□ -0.75
HERC4-202ENST00000373700 THOC2Q8NI27 1593 aaKnown RBP10.34□□□□□ -0.75
HERC4-202ENST00000373700 EHBP1L1Q8N3D4 1523 aa10.34□□□□□ -0.75
HERC4-202ENST00000373700 NUTM2FA1L443 756 aa10.34□□□□□ -0.75
HERC4-202ENST00000373700 NBPF1Q3BBV0 1214 aa10.33□□□□□ -0.76
HERC4-202ENST00000373700 SRPK2P78362 688 aaKnown RBP10.33□□□□□ -0.76
HERC4-202ENST00000373700 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
HERC4-202ENST00000373700 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
HERC4-202ENST00000373700 HECW1Q76N89 1606 aa10.33□□□□□ -0.76
HERC4-202ENST00000373700 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
HERC4-202ENST00000373700 DAPK1P53355 1430 aa10.32□□□□□ -0.76
HERC4-202ENST00000373700 NEFMP07197 916 aa10.32□□□□□ -0.76
HERC4-202ENST00000373700 ZBTB47Q9UFB7 747 aaPredicted RBP10.32□□□□□ -0.76
HERC4-202ENST00000373700 ANP32EQ9BTT0 268 aa10.32□□□□□ -0.76
HERC4-202ENST00000373700 WASHC2AQ641Q2 1341 aa10.32□□□□□ -0.76
HERC4-202ENST00000373700 USP47Q96K76 1375 aa10.31□□□□□ -0.76
HERC4-202ENST00000373700 WDR97A6NE52 1622 aa10.31□□□□□ -0.76
HERC4-202ENST00000373700 C9orf84Q5VXU9 1444 aa10.31□□□□□ -0.76
HERC4-202ENST00000373700 SCAPERQ9BY12 1400 aa10.31□□□□□ -0.76
HERC4-202ENST00000373700 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
HERC4-202ENST00000373700 CCDC184Q52MB2 194 aa10.29□□□□□ -0.76
HERC4-202ENST00000373700 ABCC5O15440 1437 aa10.29□□□□□ -0.76
HERC4-202ENST00000373700 TMEM132EQ6IEE7 984 aa10.29□□□□□ -0.76
HERC4-202ENST00000373700 MIA2Q96PC5 1412 aa10.29□□□□□ -0.76
HERC4-202ENST00000373700 KIF7Q2M1P5 1343 aa10.28□□□□□ -0.76
HERC4-202ENST00000373700 CDCA8Q53HL2 280 aa10.28□□□□□ -0.76
HERC4-202ENST00000373700 PANK3Q9H999 370 aa10.28□□□□□ -0.76
HERC4-202ENST00000373700 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.76
HERC4-202ENST00000373700 NUP153P49790 1475 aaKnown RBP10.27□□□□□ -0.76
HERC4-202ENST00000373700 PTPN23Q9H3S7 1636 aa10.27□□□□□ -0.77
HERC4-202ENST00000373700 C11orf95C9JLR9 678 aaPredicted RBP10.27□□□□□ -0.77
HERC4-202ENST00000373700 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
HERC4-202ENST00000373700 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
HERC4-202ENST00000373700 RGS3P49796 1198 aa10.26□□□□□ -0.77
HERC4-202ENST00000373700 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
HERC4-202ENST00000373700 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.25□□□□□ -0.77
HERC4-202ENST00000373700 ATP10BO94823 1461 aa10.25□□□□□ -0.77
HERC4-202ENST00000373700 CAMSAP2Q08AD1 1489 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms