RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
SP140-202ENST00000373645 PPP4R3CPQ6ZMV5 832 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 CSRNP3Q8WYN3 585 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 FANCAO15360 1455 aa12.77□□□□□ -0.37
SP140-202ENST00000373645 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
SP140-202ENST00000373645 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
SP140-202ENST00000373645 ZFYVE16Q7Z3T8 1539 aa12.74□□□□□ -0.37
SP140-202ENST00000373645 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
SP140-202ENST00000373645 MLECQ14165 292 aa12.72□□□□□ -0.37
SP140-202ENST00000373645 HECW1Q76N89 1606 aa12.72□□□□□ -0.37
SP140-202ENST00000373645 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.37
SP140-202ENST00000373645 RNF216Q9NWF9 866 aaPredicted RBP12.71□□□□□ -0.37
SP140-202ENST00000373645 CFAP74Q9C0B2 1584 aa12.71□□□□□ -0.37
SP140-202ENST00000373645 EFCAB5A4FU69 1503 aa12.7□□□□□ -0.38
SP140-202ENST00000373645 FER1L4A9Z1Z3 1794 aa12.7□□□□□ -0.38
SP140-202ENST00000373645 POGZQ7Z3K3 1410 aa12.7□□□□□ -0.38
SP140-202ENST00000373645 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
SP140-202ENST00000373645 SCAPERQ9BY12 1400 aa12.68□□□□□ -0.38
SP140-202ENST00000373645 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
SP140-202ENST00000373645 PLCH2O75038 1416 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 CEBPAP49715 358 aaPredicted RBP12.65□□□□□ -0.38
SP140-202ENST00000373645 CERKQ8TCT0 537 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
SP140-202ENST00000373645 KIF14Q15058 1648 aa12.64□□□□□ -0.39
SP140-202ENST00000373645 EEA1Q15075 1411 aa12.63□□□□□ -0.39
SP140-202ENST00000373645 C9orf84Q5VXU9 1444 aa12.62□□□□□ -0.39
SP140-202ENST00000373645 ATP10AO60312 1499 aa12.62□□□□□ -0.39
SP140-202ENST00000373645 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
SP140-202ENST00000373645 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
SP140-202ENST00000373645 MYO5CQ9NQX4 1742 aa12.6□□□□□ -0.39
SP140-202ENST00000373645 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
SP140-202ENST00000373645 KDM5CP41229 1560 aa12.59□□□□□ -0.39
SP140-202ENST00000373645 ARHGAP35Q9NRY4 1499 aa12.59□□□□□ -0.39
SP140-202ENST00000373645 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
SP140-202ENST00000373645 AFAP1Q8N556 730 aa12.58□□□□□ -0.4
SP140-202ENST00000373645 DIP2CQ9Y2E4 1556 aa12.58□□□□□ -0.4
SP140-202ENST00000373645 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 ABCA6Q8N139 1617 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
SP140-202ENST00000373645 TROQ12816 1431 aaPredicted RBP12.55□□□□□ -0.4
SP140-202ENST00000373645 EFCAB2Q5VUJ9 269 aa12.55□□□□□ -0.4
SP140-202ENST00000373645 POTEHQ6S545 545 aa12.55□□□□□ -0.4
SP140-202ENST00000373645 UHRF1BP1Q6BDS2 1440 aa12.54□□□□□ -0.4
SP140-202ENST00000373645 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
SP140-202ENST00000373645 FMN1Q68DA7 1419 aa12.54□□□□□ -0.4
SP140-202ENST00000373645 C3P01024 1663 aa12.53□□□□□ -0.4
SP140-202ENST00000373645 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
SP140-202ENST00000373645 TRAPPC8Q9Y2L5 1435 aa12.53□□□□□ -0.4
SP140-202ENST00000373645 UBTFP17480 764 aaKnown RBP12.51□□□□□ -0.41
SP140-202ENST00000373645 ABCC1P33527 1531 aa12.51□□□□□ -0.41
SP140-202ENST00000373645 REREQ9P2R6 1566 aa12.51□□□□□ -0.41
SP140-202ENST00000373645 PREX2Q70Z35 1606 aa12.49□□□□□ -0.41
SP140-202ENST00000373645 LTBP4Q8N2S1 1624 aa12.49□□□□□ -0.41
SP140-202ENST00000373645 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
SP140-202ENST00000373645 SETD1BQ9UPS6 1966 aaKnown RBP12.49□□□□□ -0.41
SP140-202ENST00000373645 ITSN2Q9NZM3 1697 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 MLH3Q9UHC1 1453 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 CLIP1P30622 1438 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
SP140-202ENST00000373645 SPATA31D1Q6ZQQ2 1576 aa12.47□□□□□ -0.41
SP140-202ENST00000373645 AGLP35573 1532 aa12.47□□□□□ -0.41
SP140-202ENST00000373645 CDK11AQ9UQ88 783 aaPredicted RBP12.47□□□□□ -0.41
SP140-202ENST00000373645 PTPRTO14522 1441 aa12.46□□□□□ -0.41
SP140-202ENST00000373645 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
SP140-202ENST00000373645 CDC42BPAQ5VT25 1732 aa12.45□□□□□ -0.42
SP140-202ENST00000373645 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
SP140-202ENST00000373645 SOCS7O14512 581 aa12.44□□□□□ -0.42
SP140-202ENST00000373645 SAMD9LQ8IVG5 1584 aa12.43□□□□□ -0.42
SP140-202ENST00000373645 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
SP140-202ENST00000373645 CAMSAP1Q5T5Y3 1602 aa12.42□□□□□ -0.42
SP140-202ENST00000373645 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
SP140-202ENST00000373645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.41□□□□□ -0.42
SP140-202ENST00000373645 CCDC18Q5T9S5 1454 aa12.4□□□□□ -0.43
SP140-202ENST00000373645 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
SP140-202ENST00000373645 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
SP140-202ENST00000373645 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
SP140-202ENST00000373645 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
SP140-202ENST00000373645 ZNF777Q9ULD5 760 aaPredicted RBP12.39□□□□□ -0.43
SP140-202ENST00000373645 NCKAP5LQ9HCH0 1330 aa12.38□□□□□ -0.43
SP140-202ENST00000373645 MROH2AA6NES4 1674 aa12.38□□□□□ -0.43
SP140-202ENST00000373645 NPATQ14207 1427 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 MYO3AQ8NEV4 1616 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 HNRNPMP52272 730 aaKnown RBP eCLIP12.37□□□□□ -0.43
SP140-202ENST00000373645 ZMYM3Q14202 1370 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 PLXNC1O60486 1568 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
SP140-202ENST00000373645 ATP7AQ04656 1500 aa12.37□□□□□ -0.43
SP140-202ENST00000373645 GPATCH8Q9UKJ3 1502 aaKnown RBP12.37□□□□□ -0.43
SP140-202ENST00000373645 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
SP140-202ENST00000373645 IQSEC2Q5JU85 1478 aa12.36□□□□□ -0.43
SP140-202ENST00000373645 ZNF142P52746 1687 aaPredicted RBP12.35□□□□□ -0.43
SP140-202ENST00000373645 FYCO1Q9BQS8 1478 aa12.35□□□□□ -0.43
SP140-202ENST00000373645 PTPRKQ15262 1439 aa12.35□□□□□ -0.43
SP140-202ENST00000373645 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
SP140-202ENST00000373645 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
SP140-202ENST00000373645 A2MP01023 1474 aa12.33□□□□□ -0.44
SP140-202ENST00000373645 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms