RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
GARNL3-201ENST00000373386 WDR62O43379 1518 aa11.44□□□□□ -0.58
GARNL3-201ENST00000373386 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
GARNL3-201ENST00000373386 TDRD9Q8NDG6 1382 aaKnown RBP11.43□□□□□ -0.58
GARNL3-201ENST00000373386 ZNF326Q5BKZ1 582 aaKnown RBP11.42□□□□□ -0.58
GARNL3-201ENST00000373386 IFT140Q96RY7 1462 aa11.42□□□□□ -0.58
GARNL3-201ENST00000373386 MTUS2Q5JR59 1369 aa11.42□□□□□ -0.58
GARNL3-201ENST00000373386 MIA2Q96PC5 1412 aa11.42□□□□□ -0.58
GARNL3-201ENST00000373386 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
GARNL3-201ENST00000373386 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.59
GARNL3-201ENST00000373386 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
GARNL3-201ENST00000373386 NAIPQ13075 1403 aa11.39□□□□□ -0.59
GARNL3-201ENST00000373386 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
GARNL3-201ENST00000373386 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
GARNL3-201ENST00000373386 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
GARNL3-201ENST00000373386 MAGI3Q5TCQ9 1506 aa11.38□□□□□ -0.59
GARNL3-201ENST00000373386 PTPRKQ15262 1439 aa11.36□□□□□ -0.59
GARNL3-201ENST00000373386 KIAA0586Q9BVV6 1533 aa11.36□□□□□ -0.59
GARNL3-201ENST00000373386 P3H3Q8IVL6 736 aa11.36□□□□□ -0.59
GARNL3-201ENST00000373386 KIAA0556O60303 1618 aa11.35□□□□□ -0.59
GARNL3-201ENST00000373386 ITGAEP38570 1179 aa11.35□□□□□ -0.59
GARNL3-201ENST00000373386 PPP1R15AO75807 674 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-201ENST00000373386 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-201ENST00000373386 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
GARNL3-201ENST00000373386 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
GARNL3-201ENST00000373386 TPRNQ4KMQ1 711 aa11.33□□□□□ -0.6
GARNL3-201ENST00000373386 KDM5BQ9UGL1 1544 aa11.32□□□□□ -0.6
GARNL3-201ENST00000373386 NAP1L5Q96NT1 182 aaPredicted RBP11.32□□□□□ -0.6
GARNL3-201ENST00000373386 ADCY10Q96PN6 1610 aa11.31□□□□□ -0.6
GARNL3-201ENST00000373386 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
GARNL3-201ENST00000373386 DNMT1P26358 1616 aaKnown RBP11.31□□□□□ -0.6
GARNL3-201ENST00000373386 RAPGEF6Q8TEU7 1601 aa11.31□□□□□ -0.6
GARNL3-201ENST00000373386 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
GARNL3-201ENST00000373386 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
GARNL3-201ENST00000373386 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
GARNL3-201ENST00000373386 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
GARNL3-201ENST00000373386 GRIN2AQ12879 1464 aa11.29□□□□□ -0.6
GARNL3-201ENST00000373386 CCER2I3L3R5 266 aa11.29□□□□□ -0.6
GARNL3-201ENST00000373386 ITSN2Q9NZM3 1697 aa11.28□□□□□ -0.6
GARNL3-201ENST00000373386 ATP1B4Q9UN42 357 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-201ENST00000373386 TONSLQ96HA7 1378 aa11.28□□□□□ -0.6
GARNL3-201ENST00000373386 CDK11AQ9UQ88 783 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-201ENST00000373386 SIN3AQ96ST3 1273 aa11.26□□□□□ -0.61
GARNL3-201ENST00000373386 DENND4BO75064 1496 aaPredicted RBP11.26□□□□□ -0.61
GARNL3-201ENST00000373386 KCNA4P22459 653 aa11.26□□□□□ -0.61
GARNL3-201ENST00000373386 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
GARNL3-201ENST00000373386 ADGBQ8N7X0 1667 aa11.25□□□□□ -0.61
GARNL3-201ENST00000373386 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
GARNL3-201ENST00000373386 CDK11BP21127 795 aaKnown RBP11.25□□□□□ -0.61
GARNL3-201ENST00000373386 CROCC2H7BZ55 1655 aa11.24□□□□□ -0.61
GARNL3-201ENST00000373386 SYNJ2O15056 1496 aa11.24□□□□□ -0.61
GARNL3-201ENST00000373386 DAPK1P53355 1430 aa11.23□□□□□ -0.61
GARNL3-201ENST00000373386 POLR1AO95602 1720 aaPredicted RBP11.22□□□□□ -0.61
GARNL3-201ENST00000373386 BCANQ96GW7 911 aa11.22□□□□□ -0.61
GARNL3-201ENST00000373386 ADGRL2O95490 1459 aa11.22□□□□□ -0.61
GARNL3-201ENST00000373386 NUP160Q12769 1436 aa11.21□□□□□ -0.61
GARNL3-201ENST00000373386 HSP90B1P14625 803 aaKnown RBP11.21□□□□□ -0.61
GARNL3-201ENST00000373386 IL27Q8NEV9 243 aa11.21□□□□□ -0.61
GARNL3-201ENST00000373386 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
GARNL3-201ENST00000373386 KDM6BO15054 1643 aa11.21□□□□□ -0.62
GARNL3-201ENST00000373386 CEP170Q5SW79 1584 aa11.21□□□□□ -0.62
GARNL3-201ENST00000373386 TROQ12816 1431 aaPredicted RBP11.2□□□□□ -0.62
GARNL3-201ENST00000373386 DDX10Q13206 875 aaKnown RBP11.2□□□□□ -0.62
GARNL3-201ENST00000373386 ABCC5O15440 1437 aa11.19□□□□□ -0.62
GARNL3-201ENST00000373386 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
GARNL3-201ENST00000373386 RPRD2Q5VT52 1461 aaKnown RBP11.19□□□□□ -0.62
GARNL3-201ENST00000373386 BCCIPQ9P287 314 aaKnown RBP eCLIP11.19□□□□□ -0.62
GARNL3-201ENST00000373386 MSH5O43196 834 aa11.18□□□□□ -0.62
GARNL3-201ENST00000373386 SHANK2Q9UPX8 1470 aa11.17□□□□□ -0.62
GARNL3-201ENST00000373386 NAP1L2Q9ULW6 460 aaPredicted RBP11.17□□□□□ -0.62
GARNL3-201ENST00000373386 ABCA8O94911 1581 aa11.17□□□□□ -0.62
GARNL3-201ENST00000373386 FKBP8Q14318 412 aa11.16□□□□□ -0.62
GARNL3-201ENST00000373386 CARMIL2Q6F5E8 1435 aa11.16□□□□□ -0.62
GARNL3-201ENST00000373386 ANP32CO43423 234 aa11.16□□□□□ -0.62
GARNL3-201ENST00000373386 ANKRD30BQ9BXX2 1392 aa11.16□□□□□ -0.62
GARNL3-201ENST00000373386 TEX14Q8IWB6 1497 aa11.16□□□□□ -0.62
GARNL3-201ENST00000373386 CAMSAP2Q08AD1 1489 aa11.15□□□□□ -0.62
GARNL3-201ENST00000373386 KDM5DQ9BY66 1539 aa11.14□□□□□ -0.63
GARNL3-201ENST00000373386 GPATCH8Q9UKJ3 1502 aaKnown RBP11.14□□□□□ -0.63
GARNL3-201ENST00000373386 MPHOSPH9Q99550 1183 aa11.13□□□□□ -0.63
GARNL3-201ENST00000373386 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
GARNL3-201ENST00000373386 KIF14Q15058 1648 aa11.12□□□□□ -0.63
GARNL3-201ENST00000373386 ARHGEF5Q12774 1597 aa11.12□□□□□ -0.63
GARNL3-201ENST00000373386 MBD5Q9P267 1494 aa11.12□□□□□ -0.63
GARNL3-201ENST00000373386 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
GARNL3-201ENST00000373386 NCOA1Q15788 1441 aa11.11□□□□□ -0.63
GARNL3-201ENST00000373386 PZPP20742 1482 aa11.11□□□□□ -0.63
GARNL3-201ENST00000373386 ABCC10Q5T3U5 1492 aa11.11□□□□□ -0.63
GARNL3-201ENST00000373386 RRP7BPQ9NSQ0 103 aa11.1□□□□□ -0.63
GARNL3-201ENST00000373386 SPATA31E1Q6ZUB1 1445 aa11.09□□□□□ -0.63
GARNL3-201ENST00000373386 CNTLNQ9NXG0 1405 aa11.09□□□□□ -0.63
GARNL3-201ENST00000373386 IPO4Q8TEX9 1081 aaKnown RBP11.08□□□□□ -0.64
GARNL3-201ENST00000373386 EIF4G2P78344 907 aaKnown RBP eCLIP11.08□□□□□ -0.64
GARNL3-201ENST00000373386 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
GARNL3-201ENST00000373386 PLB1Q6P1J6 1458 aa11.07□□□□□ -0.64
GARNL3-201ENST00000373386 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
GARNL3-201ENST00000373386 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
GARNL3-201ENST00000373386 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
GARNL3-201ENST00000373386 TRIM52Q96A61 297 aa11.06□□□□□ -0.64
GARNL3-201ENST00000373386 UHRF1BP1Q6BDS2 1440 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms