RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
TRERF1-204ENST00000372922 CFAP44Q96MT7 982 aa12.63□□□□□ -0.39
TRERF1-204ENST00000372922 GOLGA6L4A6NEF3 574 aa12.62□□□□□ -0.39
TRERF1-204ENST00000372922 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
TRERF1-204ENST00000372922 PLCB2Q00722 1185 aa12.62□□□□□ -0.39
TRERF1-204ENST00000372922 BAZ1AQ9NRL2 1556 aaPredicted RBP12.61□□□□□ -0.39
TRERF1-204ENST00000372922 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
TRERF1-204ENST00000372922 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
TRERF1-204ENST00000372922 GGT6Q6P531 493 aa12.61□□□□□ -0.39
TRERF1-204ENST00000372922 CARMIL2Q6F5E8 1435 aa12.6□□□□□ -0.39
TRERF1-204ENST00000372922 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRERF1-204ENST00000372922 ISY1Q9ULR0 285 aaKnown RBP12.6□□□□□ -0.39
TRERF1-204ENST00000372922 CUX2O14529 1486 aa12.59□□□□□ -0.39
TRERF1-204ENST00000372922 TMX4Q9H1E5 349 aaPredicted RBP12.59□□□□□ -0.39
TRERF1-204ENST00000372922 CLSTN1O94985 981 aa12.59□□□□□ -0.39
TRERF1-204ENST00000372922 STK26Q9P289 416 aa12.59□□□□□ -0.39
TRERF1-204ENST00000372922 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
TRERF1-204ENST00000372922 CSB-PGBD3P0DP91 1061 aa12.58□□□□□ -0.4
TRERF1-204ENST00000372922 CALD1Q05682 793 aaKnown RBP12.58□□□□□ -0.4
TRERF1-204ENST00000372922 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
TRERF1-204ENST00000372922 CHMP4AQ9BY43 222 aa12.57□□□□□ -0.4
TRERF1-204ENST00000372922 IPO8O15397 1037 aaKnown RBP12.56□□□□□ -0.4
TRERF1-204ENST00000372922 GNL2Q13823 731 aaKnown RBP12.55□□□□□ -0.4
TRERF1-204ENST00000372922 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
TRERF1-204ENST00000372922 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
TRERF1-204ENST00000372922 KIAA1211Q6ZU35 1233 aa12.54□□□□□ -0.4
TRERF1-204ENST00000372922 PRKCSHP14314 528 aaPredicted RBP12.54□□□□□ -0.4
TRERF1-204ENST00000372922 APPP05067 770 aa12.53□□□□□ -0.4
TRERF1-204ENST00000372922 KTN1Q86UP2 1357 aaKnown RBP12.53□□□□□ -0.4
TRERF1-204ENST00000372922 L1TD1Q5T7N2 865 aaKnown RBP12.52□□□□□ -0.4
TRERF1-204ENST00000372922 EFCAB2Q5VUJ9 269 aa12.52□□□□□ -0.41
TRERF1-204ENST00000372922 PKD2Q13563 968 aa12.51□□□□□ -0.41
TRERF1-204ENST00000372922 PDS5BQ9NTI5 1447 aa12.51□□□□□ -0.41
TRERF1-204ENST00000372922 CCDC9Q9Y3X0 531 aaKnown RBP12.51□□□□□ -0.41
TRERF1-204ENST00000372922 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
TRERF1-204ENST00000372922 EID1Q9Y6B2 187 aa12.51□□□□□ -0.41
TRERF1-204ENST00000372922 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
TRERF1-204ENST00000372922 SETD5Q9C0A6 1442 aa12.5□□□□□ -0.41
TRERF1-204ENST00000372922 CHAF1AQ13111 956 aaPredicted RBP12.5□□□□□ -0.41
TRERF1-204ENST00000372922 SPAG9O60271 1321 aaKnown RBP12.49□□□□□ -0.41
TRERF1-204ENST00000372922 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
TRERF1-204ENST00000372922 PKNOX2Q96KN3 472 aa12.49□□□□□ -0.41
TRERF1-204ENST00000372922 HDAC5Q9UQL6 1122 aa12.48□□□□□ -0.41
TRERF1-204ENST00000372922 NOP58Q9Y2X3 529 aaKnown RBP12.48□□□□□ -0.41
TRERF1-204ENST00000372922 DRC7Q8IY82 874 aa12.48□□□□□ -0.41
TRERF1-204ENST00000372922 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
TRERF1-204ENST00000372922 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRERF1-204ENST00000372922 MSNP26038 577 aaKnown RBP12.47□□□□□ -0.41
TRERF1-204ENST00000372922 KIAA2012Q0VF49 1180 aa12.47□□□□□ -0.41
TRERF1-204ENST00000372922 MYO15BQ96JP2 1530 aa12.47□□□□□ -0.41
TRERF1-204ENST00000372922 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
TRERF1-204ENST00000372922 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
TRERF1-204ENST00000372922 ANKRD30AQ9BXX3 1397 aa12.46□□□□□ -0.41
TRERF1-204ENST00000372922 GPATCH3Q96I76 525 aa12.46□□□□□ -0.41
TRERF1-204ENST00000372922 STK31Q9BXU1 1019 aa12.46□□□□□ -0.41
TRERF1-204ENST00000372922 TAF7LQ5H9L4 462 aa12.46□□□□□ -0.41
TRERF1-204ENST00000372922 APBB1O00213 710 aa12.46□□□□□ -0.42
TRERF1-204ENST00000372922 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.42
TRERF1-204ENST00000372922 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.42
TRERF1-204ENST00000372922 HSP90AA2PQ14568 343 aaPredicted RBP12.45□□□□□ -0.42
TRERF1-204ENST00000372922 G3V3G9 751 aa12.45□□□□□ -0.42
TRERF1-204ENST00000372922 DCAF8Q5TAQ9 597 aa12.45□□□□□ -0.42
TRERF1-204ENST00000372922 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
TRERF1-204ENST00000372922 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
TRERF1-204ENST00000372922 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
TRERF1-204ENST00000372922 NUP155O75694 1391 aa12.45□□□□□ -0.42
TRERF1-204ENST00000372922 RALBP1Q15311 655 aa12.45□□□□□ -0.42
TRERF1-204ENST00000372922 SOGA1O94964 1423 aa12.44□□□□□ -0.42
TRERF1-204ENST00000372922 PTMSP20962 102 aa12.44□□□□□ -0.42
TRERF1-204ENST00000372922 FMN1Q68DA7 1419 aa12.44□□□□□ -0.42
TRERF1-204ENST00000372922 RWDD1Q9H446 243 aaPredicted RBP12.44□□□□□ -0.42
TRERF1-204ENST00000372922 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
TRERF1-204ENST00000372922 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
TRERF1-204ENST00000372922 NGDNQ8NEJ9 315 aaKnown RBP12.43□□□□□ -0.42
TRERF1-204ENST00000372922 SMARCA2P51531 1590 aa12.43□□□□□ -0.42
TRERF1-204ENST00000372922 KIF3BO15066 747 aa12.42□□□□□ -0.42
TRERF1-204ENST00000372922 HMMRO75330 724 aa12.4□□□□□ -0.42
TRERF1-204ENST00000372922 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
TRERF1-204ENST00000372922 CCDC34Q96HJ3 373 aa12.4□□□□□ -0.42
TRERF1-204ENST00000372922 MPHOSPH9Q99550 1183 aa12.4□□□□□ -0.42
TRERF1-204ENST00000372922 LMOD3Q0VAK6 560 aa12.4□□□□□ -0.42
TRERF1-204ENST00000372922 RSPH4AQ5TD94 716 aa12.4□□□□□ -0.42
TRERF1-204ENST00000372922 KRI1Q8N9T8 703 aaKnown RBP12.4□□□□□ -0.42
TRERF1-204ENST00000372922 WASHC2CQ9Y4E1 1318 aa12.4□□□□□ -0.42
TRERF1-204ENST00000372922 FOXD1Q16676 465 aa12.4□□□□□ -0.43
TRERF1-204ENST00000372922 AMPHP49418 695 aa12.39□□□□□ -0.43
TRERF1-204ENST00000372922 PMFBP1Q8TBY8 1022 aa12.39□□□□□ -0.43
TRERF1-204ENST00000372922 GBP4Q96PP9 640 aa12.39□□□□□ -0.43
TRERF1-204ENST00000372922 TPM4P67936 248 aa12.38□□□□□ -0.43
TRERF1-204ENST00000372922 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
TRERF1-204ENST00000372922 RCAN3Q9UKA8 241 aa12.37□□□□□ -0.43
TRERF1-204ENST00000372922 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
TRERF1-204ENST00000372922 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
TRERF1-204ENST00000372922 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
TRERF1-204ENST00000372922 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
TRERF1-204ENST00000372922 CECR2Q9BXF3 1484 aa12.36□□□□□ -0.43
TRERF1-204ENST00000372922 TRIM6-TRIM34B2RNG4 842 aa12.36□□□□□ -0.43
TRERF1-204ENST00000372922 TDRD9Q8NDG6 1382 aaKnown RBP12.35□□□□□ -0.43
TRERF1-204ENST00000372922 HNRNPMP52272 730 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRERF1-204ENST00000372922 NOC3LQ8WTT2 800 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms