RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 KANK4Q5T7N3 995 aaPredicted RBP13.91□□□□□ -0.18
TRERF1-203ENST00000372917 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
TRERF1-203ENST00000372917 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
TRERF1-203ENST00000372917 FTSJ3Q8IY81 847 aaKnown RBP13.89□□□□□ -0.19
TRERF1-203ENST00000372917 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
TRERF1-203ENST00000372917 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
TRERF1-203ENST00000372917 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
TRERF1-203ENST00000372917 CDK11BP21127 795 aaKnown RBP13.87□□□□□ -0.19
TRERF1-203ENST00000372917 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
TRERF1-203ENST00000372917 KIAA1211Q6ZU35 1233 aa13.86□□□□□ -0.19
TRERF1-203ENST00000372917 SMAP1Q8IYB5 467 aaPredicted RBP13.86□□□□□ -0.19
TRERF1-203ENST00000372917 RRBP1Q9P2E9 1410 aaKnown RBP13.86□□□□□ -0.19
TRERF1-203ENST00000372917 PANK2Q9BZ23 570 aa13.85□□□□□ -0.19
TRERF1-203ENST00000372917 GOLGA6L3A6NEY3 463 aa13.85□□□□□ -0.19
TRERF1-203ENST00000372917 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
TRERF1-203ENST00000372917 ESPNB1AK53 854 aa13.84□□□□□ -0.19
TRERF1-203ENST00000372917 TRIM44Q96DX7 344 aaPredicted RBP13.84□□□□□ -0.19
TRERF1-203ENST00000372917 XRCC6P12956 609 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRERF1-203ENST00000372917 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
TRERF1-203ENST00000372917 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
TRERF1-203ENST00000372917 GZF1Q9H116 711 aaPredicted RBP13.83□□□□□ -0.2
TRERF1-203ENST00000372917 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.2
TRERF1-203ENST00000372917 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
TRERF1-203ENST00000372917 TMEM51Q9NW97 253 aa13.82□□□□□ -0.2
TRERF1-203ENST00000372917 MAP7D2Q96T17 732 aa13.8□□□□□ -0.2
TRERF1-203ENST00000372917 SETD5Q9C0A6 1442 aa13.79□□□□□ -0.2
TRERF1-203ENST00000372917 MRS2Q9HD23 443 aa13.79□□□□□ -0.2
TRERF1-203ENST00000372917 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
TRERF1-203ENST00000372917 E9PSI1 815 aa13.78□□□□□ -0.2
TRERF1-203ENST00000372917 DNTTIP2Q5QJE6 756 aaKnown RBP13.78□□□□□ -0.2
TRERF1-203ENST00000372917 CCDC184Q52MB2 194 aa13.78□□□□□ -0.2
TRERF1-203ENST00000372917 MYH16Q9H6N6 1097 aa13.77□□□□□ -0.2
TRERF1-203ENST00000372917 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.2
TRERF1-203ENST00000372917 ERICH3Q5RHP9 1530 aa13.77□□□□□ -0.2
TRERF1-203ENST00000372917 MS4A1P11836 297 aa13.77□□□□□ -0.21
TRERF1-203ENST00000372917 CUX2O14529 1486 aa13.77□□□□□ -0.21
TRERF1-203ENST00000372917 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
TRERF1-203ENST00000372917 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
TRERF1-203ENST00000372917 KIF27Q86VH2 1401 aa13.74□□□□□ -0.21
TRERF1-203ENST00000372917 TEX2Q8IWB9 1127 aa13.74□□□□□ -0.21
TRERF1-203ENST00000372917 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
TRERF1-203ENST00000372917 DMTNQ08495 405 aa13.73□□□□□ -0.21
TRERF1-203ENST00000372917 ERBB4Q15303 1308 aa13.73□□□□□ -0.21
TRERF1-203ENST00000372917 WDR97A6NE52 1622 aa13.73□□□□□ -0.21
TRERF1-203ENST00000372917 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
TRERF1-203ENST00000372917 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
TRERF1-203ENST00000372917 EXOC6Q8TAG9 804 aa13.71□□□□□ -0.21
TRERF1-203ENST00000372917 PRXQ9BXM0 1461 aa13.71□□□□□ -0.21
TRERF1-203ENST00000372917 RIPK4P57078 832 aa13.71□□□□□ -0.22
TRERF1-203ENST00000372917 UTP14CQ5TAP6 766 aaKnown RBP13.7□□□□□ -0.22
TRERF1-203ENST00000372917 ZBTB22O15209 634 aa13.7□□□□□ -0.22
TRERF1-203ENST00000372917 NUDCQ9Y266 331 aa13.7□□□□□ -0.22
TRERF1-203ENST00000372917 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
TRERF1-203ENST00000372917 IRX3P78415 501 aaPredicted RBP13.68□□□□□ -0.22
TRERF1-203ENST00000372917 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
TRERF1-203ENST00000372917 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
TRERF1-203ENST00000372917 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
TRERF1-203ENST00000372917 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
TRERF1-203ENST00000372917 CGNQ9P2M7 1197 aaKnown RBP13.66□□□□□ -0.22
TRERF1-203ENST00000372917 MAPKBP1O60336 1514 aa13.66□□□□□ -0.22
TRERF1-203ENST00000372917 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
TRERF1-203ENST00000372917 ATAD2BQ9ULI0 1458 aa13.65□□□□□ -0.22
TRERF1-203ENST00000372917 MRE11P49959 708 aa13.65□□□□□ -0.22
TRERF1-203ENST00000372917 PEG3Q9GZU2 1588 aa13.64□□□□□ -0.23
TRERF1-203ENST00000372917 ZSCAN20P17040 1043 aaPredicted RBP13.63□□□□□ -0.23
TRERF1-203ENST00000372917 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
TRERF1-203ENST00000372917 MTERF4Q7Z6M4 381 aaKnown RBP13.63□□□□□ -0.23
TRERF1-203ENST00000372917 UQCRHLA0A096LP55 91 aa13.63□□□□□ -0.23
TRERF1-203ENST00000372917 UQCRHP07919 91 aa13.63□□□□□ -0.23
TRERF1-203ENST00000372917 TULP1O00294 542 aaPredicted RBP13.62□□□□□ -0.23
TRERF1-203ENST00000372917 KIF20AO95235 890 aa13.62□□□□□ -0.23
TRERF1-203ENST00000372917 MSNP26038 577 aaKnown RBP13.62□□□□□ -0.23
TRERF1-203ENST00000372917 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
TRERF1-203ENST00000372917 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
TRERF1-203ENST00000372917 CNPY4Q8N129 248 aa13.62□□□□□ -0.23
TRERF1-203ENST00000372917 TMC1Q8TDI8 760 aa13.62□□□□□ -0.23
TRERF1-203ENST00000372917 CBX1P83916 185 aa13.61□□□□□ -0.23
TRERF1-203ENST00000372917 GRPEL1Q9HAV7 217 aa13.61□□□□□ -0.23
TRERF1-203ENST00000372917 SMG6Q86US8 1419 aaKnown RBP13.6□□□□□ -0.23
TRERF1-203ENST00000372917 FSD2A1L4K1 749 aa13.6□□□□□ -0.23
TRERF1-203ENST00000372917 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
TRERF1-203ENST00000372917 RGS22Q8NE09 1264 aa13.59□□□□□ -0.23
TRERF1-203ENST00000372917 OFD1O75665 1012 aa13.59□□□□□ -0.23
TRERF1-203ENST00000372917 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.23
TRERF1-203ENST00000372917 WWC1Q8IX03 1113 aa13.58□□□□□ -0.23
TRERF1-203ENST00000372917 APPP05067 770 aa13.58□□□□□ -0.24
TRERF1-203ENST00000372917 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
TRERF1-203ENST00000372917 CCDC94Q9BW85 323 aaPredicted RBP13.58□□□□□ -0.24
TRERF1-203ENST00000372917 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
TRERF1-203ENST00000372917 UNC13AQ9UPW8 1703 aa13.57□□□□□ -0.24
TRERF1-203ENST00000372917 RNF123Q5XPI4 1314 aa13.57□□□□□ -0.24
TRERF1-203ENST00000372917 IGSF3O75054 1194 aa13.56□□□□□ -0.24
TRERF1-203ENST00000372917 TIAM1Q13009 1591 aa13.56□□□□□ -0.24
TRERF1-203ENST00000372917 LRRC9Q6ZRR7 1453 aa13.56□□□□□ -0.24
TRERF1-203ENST00000372917 BECN1Q14457 450 aa13.56□□□□□ -0.24
TRERF1-203ENST00000372917 PHLDB1Q86UU1 1377 aa13.55□□□□□ -0.24
TRERF1-203ENST00000372917 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
TRERF1-203ENST00000372917 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
TRERF1-203ENST00000372917 HOMEZQ8IX15 550 aa13.55□□□□□ -0.24
TRERF1-203ENST00000372917 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms