RNA–Protein interactions for RNA: ENST00000372903.6

UBR2-203, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

TSL 1 (best) BASIC

Gene UBR2, Length 2,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-203ENST00000372903 NBPF8Q3BBV2 869 aa28.25■■■□□ 2.11
UBR2-203ENST00000372903 NCOA1Q15788 1441 aa28.24■■■□□ 2.11
UBR2-203ENST00000372903 CCDC7Q96M83 1385 aa28.24■■■□□ 2.11
UBR2-203ENST00000372903 ANKRD30BQ9BXX2 1392 aa28.24■■■□□ 2.11
UBR2-203ENST00000372903 ZNF644Q9H582 1327 aaPredicted RBP28.24■■■□□ 2.11
UBR2-203ENST00000372903 DAPK1P53355 1430 aa28.23■■■□□ 2.11
UBR2-203ENST00000372903 PRKRIP1Q9H875 184 aaPredicted RBP28.2■■■□□ 2.11
UBR2-203ENST00000372903 RPRD2Q5VT52 1461 aaKnown RBP28.2■■■□□ 2.1
UBR2-203ENST00000372903 ABCC5O15440 1437 aa28.2■■■□□ 2.1
UBR2-203ENST00000372903 TEX14Q8IWB6 1497 aa28.18■■■□□ 2.1
UBR2-203ENST00000372903 ROCK1Q13464 1354 aa28.17■■■□□ 2.1
UBR2-203ENST00000372903 ERCC6Q03468 1493 aa28.17■■■□□ 2.1
UBR2-203ENST00000372903 FAM9BQ8IZU0 186 aa28.16■■■□□ 2.1
UBR2-203ENST00000372903 ZNF608Q9ULD9 1512 aaPredicted RBP28.14■■■□□ 2.1
UBR2-203ENST00000372903 SLC4A1APQ9BWU0 796 aaKnown RBP28.14■■■□□ 2.1
UBR2-203ENST00000372903 DNMT1P26358 1616 aaKnown RBP28.14■■■□□ 2.1
UBR2-203ENST00000372903 IFT140Q96RY7 1462 aa28.13■■■□□ 2.09
UBR2-203ENST00000372903 MRS2Q9HD23 443 aa28.12■■■□□ 2.09
UBR2-203ENST00000372903 NUP153P49790 1475 aaKnown RBP28.11■■■□□ 2.09
UBR2-203ENST00000372903 KIF7Q2M1P5 1343 aa28.11■■■□□ 2.09
UBR2-203ENST00000372903 DISP1Q96F81 1524 aa28.11■■■□□ 2.09
UBR2-203ENST00000372903 SPATA31E1Q6ZUB1 1445 aa28.1■■■□□ 2.09
UBR2-203ENST00000372903 KIAA0556O60303 1618 aa28.08■■■□□ 2.09
UBR2-203ENST00000372903 MSH5O43196 834 aa28.08■■■□□ 2.09
UBR2-203ENST00000372903 CDK11AQ9UQ88 783 aaPredicted RBP28.05■■■□□ 2.08
UBR2-203ENST00000372903 KIAA0586Q9BVV6 1533 aa28.04■■■□□ 2.08
UBR2-203ENST00000372903 PZPP20742 1482 aa28.01■■■□□ 2.08
UBR2-203ENST00000372903 ZBED9Q6R2W3 1325 aa28.01■■■□□ 2.08
UBR2-203ENST00000372903 RAPGEF6Q8TEU7 1601 aa28■■■□□ 2.07
UBR2-203ENST00000372903 PPP4R2Q9NY27 417 aa28■■■□□ 2.07
UBR2-203ENST00000372903 PRG4Q92954 1404 aaPredicted RBP28■■■□□ 2.07
UBR2-203ENST00000372903 ERICH6BQ5W0A0 696 aa27.98■■■□□ 2.07
UBR2-203ENST00000372903 EIF4G3O43432 1585 aaKnown RBP27.96■■■□□ 2.07
UBR2-203ENST00000372903 POLR1AO95602 1720 aaPredicted RBP27.96■■■□□ 2.07
UBR2-203ENST00000372903 CAMSAP2Q08AD1 1489 aa27.96■■■□□ 2.07
UBR2-203ENST00000372903 CFDP1Q9UEE9 299 aaPredicted RBP27.94■■■□□ 2.06
UBR2-203ENST00000372903 CNGB1Q14028 1251 aaPredicted RBP27.94■■■□□ 2.06
UBR2-203ENST00000372903 FANCIQ9NVI1 1328 aa27.93■■■□□ 2.06
UBR2-203ENST00000372903 ZNF326Q5BKZ1 582 aaKnown RBP27.92■■■□□ 2.06
UBR2-203ENST00000372903 B4GALNT3Q6L9W6 998 aa27.92■■■□□ 2.06
UBR2-203ENST00000372903 TROQ12816 1431 aaPredicted RBP27.92■■■□□ 2.06
UBR2-203ENST00000372903 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
UBR2-203ENST00000372903 ZNF777Q9ULD5 760 aaPredicted RBP27.91■■■□□ 2.06
UBR2-203ENST00000372903 MBD5Q9P267 1494 aa27.91■■■□□ 2.06
UBR2-203ENST00000372903 DHX29Q7Z478 1369 aaKnown RBP27.9■■■□□ 2.06
UBR2-203ENST00000372903 GPATCH8Q9UKJ3 1502 aaKnown RBP27.88■■■□□ 2.05
UBR2-203ENST00000372903 POLR3GLQ9BT43 218 aa27.88■■■□□ 2.05
UBR2-203ENST00000372903 PLB1Q6P1J6 1458 aa27.88■■■□□ 2.05
UBR2-203ENST00000372903 KIAA1107Q9UPP5 1409 aa27.87■■■□□ 2.05
UBR2-203ENST00000372903 BCORL1Q5H9F3 1711 aa27.87■■■□□ 2.05
UBR2-203ENST00000372903 USP47Q96K76 1375 aa27.87■■■□□ 2.05
UBR2-203ENST00000372903 PKD2Q13563 968 aa27.87■■■□□ 2.05
UBR2-203ENST00000372903 KIF14Q15058 1648 aa27.86■■■□□ 2.05
UBR2-203ENST00000372903 ADGBQ8N7X0 1667 aa27.83■■■□□ 2.05
UBR2-203ENST00000372903 ITSN2Q9NZM3 1697 aa27.81■■■□□ 2.04
UBR2-203ENST00000372903 ADGRL2O95490 1459 aa27.81■■■□□ 2.04
UBR2-203ENST00000372903 SENP3-EIF4A1A0A087X0R7 540 aa27.78■■■□□ 2.04
UBR2-203ENST00000372903 CROCC2H7BZ55 1655 aa27.77■■■□□ 2.04
UBR2-203ENST00000372903 ANKRD30AQ9BXX3 1397 aa27.77■■■□□ 2.04
UBR2-203ENST00000372903 KDM5CP41229 1560 aa27.76■■■□□ 2.03
UBR2-203ENST00000372903 ANKRD50Q9ULJ7 1429 aa27.76■■■□□ 2.03
UBR2-203ENST00000372903 SMG6Q86US8 1419 aaKnown RBP27.75■■■□□ 2.03
UBR2-203ENST00000372903 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
UBR2-203ENST00000372903 ADCY10Q96PN6 1610 aa27.73■■■□□ 2.03
UBR2-203ENST00000372903 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
UBR2-203ENST00000372903 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
UBR2-203ENST00000372903 FBLN2P98095 1184 aa27.7■■■□□ 2.02
UBR2-203ENST00000372903 NUDCQ9Y266 331 aa27.69■■■□□ 2.02
UBR2-203ENST00000372903 NUP155O75694 1391 aa27.69■■■□□ 2.02
UBR2-203ENST00000372903 ERICH6Q7L0X2 663 aa27.68■■■□□ 2.02
UBR2-203ENST00000372903 SYNJ2O15056 1496 aa27.67■■■□□ 2.02
UBR2-203ENST00000372903 ARID4BQ4LE39 1312 aaPredicted RBP27.66■■■□□ 2.02
UBR2-203ENST00000372903 UHRF1BP1Q6BDS2 1440 aa27.66■■■□□ 2.02
UBR2-203ENST00000372903 CARD11Q9BXL7 1154 aa27.66■■■□□ 2.02
UBR2-203ENST00000372903 BCL11AQ9H165 835 aa27.66■■■□□ 2.02
UBR2-203ENST00000372903 PNISRQ8TF01 805 aaKnown RBP27.66■■■□□ 2.02
UBR2-203ENST00000372903 RALGAPBQ86X10 1494 aa27.66■■■□□ 2.02
UBR2-203ENST00000372903 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
UBR2-203ENST00000372903 KDM2AQ9Y2K7 1162 aa27.63■■■□□ 2.01
UBR2-203ENST00000372903 C9orf84Q5VXU9 1444 aa27.63■■■□□ 2.01
UBR2-203ENST00000372903 RNF123Q5XPI4 1314 aa27.62■■■□□ 2.01
UBR2-203ENST00000372903 CDC42BPAQ5VT25 1732 aa27.62■■■□□ 2.01
UBR2-203ENST00000372903 CARMIL2Q6F5E8 1435 aa27.61■■■□□ 2.01
UBR2-203ENST00000372903 TMC1Q8TDI8 760 aa27.61■■■□□ 2.01
UBR2-203ENST00000372903 ST20-MTHFSA0A0A6YYL1 179 aa27.6■■■□□ 2.01
UBR2-203ENST00000372903 PLEKHD1A6NEE1 506 aa27.6■■■□□ 2.01
UBR2-203ENST00000372903 ABCC10Q5T3U5 1492 aa27.59■■■□□ 2.01
UBR2-203ENST00000372903 ROCK2O75116 1388 aaKnown RBP27.58■■■□□ 2.01
UBR2-203ENST00000372903 ARHGEF12Q9NZN5 1544 aa27.57■■■□□ 2
UBR2-203ENST00000372903 SHANK2Q9UPX8 1470 aa27.56■■■□□ 2
UBR2-203ENST00000372903 DCAF11Q8TEB1 546 aa27.56■■■□□ 2
UBR2-203ENST00000372903 ATP10BO94823 1461 aa27.55■■■□□ 2
UBR2-203ENST00000372903 KIF15Q9NS87 1388 aa27.54■■■□□ 2
UBR2-203ENST00000372903 HNRNPMP52272 730 aaKnown RBP eCLIP27.54■■■□□ 27e-7■■□□□ 13.5
UBR2-203ENST00000372903 CCDC136Q96JN2 1154 aa27.54■■■□□ 2
UBR2-203ENST00000372903 NUP160Q12769 1436 aa27.53■■■□□ 2
UBR2-203ENST00000372903 TSPY4P0CV99 314 aa27.53■■■□□ 2
UBR2-203ENST00000372903 TSPY10P0CW01 314 aa27.53■■■□□ 2
UBR2-203ENST00000372903 KDM5DQ9BY66 1539 aa27.52■■■□□ 2
UBR2-203ENST00000372903 ABCA8O94911 1581 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms